RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	LY6G6C	O95867	125 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	INS	P01308	110 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	GIG44	P09565	113 aa	Predicted RBP	5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	UBE2D1	P51668	147 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	HERVK_113	P61574	105 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	ZNF415	Q09FC8	603 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	C12orf74	Q32Q52	190 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	C11orf72	Q8NBR9	251 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	LINC01587	Q99440	93 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	PRADC1	Q9BSG0	188 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	XCL2	Q9UBD3	114 aa		5.09	□□□□□ -1.59
PUDP-204	ENST00000486446	IGHV3-53	P01767	116 aa		5.08	□□□□□ -1.6
PUDP-204	ENST00000486446	RBMY1A1	P0DJD3	496 aa	Known RBP	5.08	□□□□□ -1.6
PUDP-204	ENST00000486446	RBMY1C	P0DJD4	496 aa		5.08	□□□□□ -1.6
PUDP-204	ENST00000486446	MIF	P14174	115 aa		5.08	□□□□□ -1.6
PUDP-204	ENST00000486446	DAZ2	Q13117	558 aa	Known RBP	5.08	□□□□□ -1.6
PUDP-204	ENST00000486446	RBMY1F	Q15415	496 aa	Known RBP	5.08	□□□□□ -1.6
PUDP-204	ENST00000486446	RRN3P1	Q2M238	152 aa		5.08	□□□□□ -1.6
PUDP-204	ENST00000486446		Q8NAQ8	132 aa		5.08	□□□□□ -1.6
PUDP-204	ENST00000486446	C20orf203	Q8NBC4	194 aa		5.08	□□□□□ -1.6
PUDP-204	ENST00000486446	AMELX	Q99217	191 aa		5.08	□□□□□ -1.6
PUDP-204	ENST00000486446	JPT2	Q9H910	190 aa		5.08	□□□□□ -1.6
PUDP-204	ENST00000486446	IGHV3OR16-12	A0A075B7B8	117 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446		A0A0J9YY99	117 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446		F8W1H4	67 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446		P0DMU3	169 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446	FAM231A	P0DMU4	169 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446	FAM231C	P0DMU5	169 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446	TCTA	P57738	103 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446	MRPL23	Q16540	153 aa	Known RBP	5.07	□□□□□ -1.6
PUDP-204	ENST00000486446	SERTAD4-AS1	Q5TG53	156 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446	CFAP126	Q5VTH2	177 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446	SLC25A29	Q8N8R3	303 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446	CSNK1G2-AS1	Q8NCQ2	148 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446	HIST1H4G	Q99525	98 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446	NHP2	Q9NX24	153 aa	Known RBP	5.07	□□□□□ -1.6
PUDP-204	ENST00000486446	AGRN	O00468	2067 aa		5.07	□□□□□ -1.6
PUDP-204	ENST00000486446	TRBV10-1	A0A0K0K1A3	114 aa		5.06	□□□□□ -1.6
PUDP-204	ENST00000486446	ZNF815P	A8K554	130 aa		5.06	□□□□□ -1.6
PUDP-204	ENST00000486446	C1orf158	Q8N1D5	194 aa		5.06	□□□□□ -1.6
PUDP-204	ENST00000486446	ZNRF2	Q8NHG8	242 aa		5.06	□□□□□ -1.6
PUDP-204	ENST00000486446	RAB37	Q96AX2	223 aa		5.06	□□□□□ -1.6
PUDP-204	ENST00000486446	DNAH7	Q8WXX0	4024 aa		5.06	□□□□□ -1.6
PUDP-204	ENST00000486446	KIAA1109	Q2LD37	5005 aa		5.06	□□□□□ -1.6
PUDP-204	ENST00000486446	TRAV10	A0A0B4J240	114 aa		5.05	□□□□□ -1.6
PUDP-204	ENST00000486446	TMEM223	A0PJW6	202 aa		5.05	□□□□□ -1.6
PUDP-204	ENST00000486446		K7ERJ3	54 aa		5.05	□□□□□ -1.6
PUDP-204	ENST00000486446	LEPROT	O15243	131 aa		5.05	□□□□□ -1.6
PUDP-204	ENST00000486446	EMP1	P54849	157 aa		5.05	□□□□□ -1.6
PUDP-204	ENST00000486446	UBE2D3	P61077	147 aa		5.05	□□□□□ -1.6
PUDP-204	ENST00000486446	UBE2D2	P62837	147 aa		5.05	□□□□□ -1.6
PUDP-204	ENST00000486446	RPL39	P62891	51 aa	Known RBP	5.05	□□□□□ -1.6
PUDP-204	ENST00000486446	ZNF56	Q15929	161 aa		5.05	□□□□□ -1.6
PUDP-204	ENST00000486446	TMEM263	Q8WUH6	116 aa	Known RBP	5.05	□□□□□ -1.6
PUDP-204	ENST00000486446	TIMM21	Q9BVV7	248 aa		5.05	□□□□□ -1.6
PUDP-204	ENST00000486446	PRO0461	Q9UI25	63 aa		5.05	□□□□□ -1.6
PUDP-204	ENST00000486446		V9GYY9	64 aa		5.05	□□□□□ -1.6
PUDP-204	ENST00000486446	NACA	E9PAV3	2078 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	IGLV4-3	A0A075B6K6	122 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	SMIM9	A6NGZ8	99 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446		J3QQQ9	107 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	TRIAP1	O43715	76 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	IGHV3-30	P01768	117 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	IGHV3-30-5	P0DP03	117 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	ZNF22	P17026	224 aa	Predicted RBP	5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	MRPS36	P82909	103 aa	Known RBP	5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	FAM74A4	Q5TZK3	123 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446		Q6ZTC4	211 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	ATP6V0E2	Q8NHE4	81 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	FAM104A	Q969W3	186 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	PLEKHB2	Q96CS7	222 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	LINC01600	Q96MT4	127 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	VPS25	Q9BRG1	176 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	CELA1	Q9UNI1	258 aa		5.04	□□□□□ -1.6
PUDP-204	ENST00000486446	DEFB131B	A0A096LNP1	70 aa		5.03	□□□□□ -1.6
PUDP-204	ENST00000486446	SPART-AS1	P0CW21	52 aa		5.03	□□□□□ -1.6
PUDP-204	ENST00000486446	TSPEAR-AS2	P59090	65 aa		5.03	□□□□□ -1.6
PUDP-204	ENST00000486446	SMAGP	Q0VAQ4	97 aa		5.03	□□□□□ -1.6
PUDP-204	ENST00000486446	LINC01620	Q4KN68	170 aa		5.03	□□□□□ -1.6
PUDP-204	ENST00000486446	LYRM7	Q5U5X0	104 aa		5.03	□□□□□ -1.6
PUDP-204	ENST00000486446	FAM19A3	Q7Z5A8	133 aa		5.03	□□□□□ -1.6
PUDP-204	ENST00000486446	DAZ4	Q86SG3	579 aa	Known RBP	5.03	□□□□□ -1.6
PUDP-204	ENST00000486446	C16orf74	Q96GX8	76 aa		5.03	□□□□□ -1.6
PUDP-204	ENST00000486446	NAA38	Q9BRA0	125 aa	Known RBP	5.03	□□□□□ -1.6
PUDP-204	ENST00000486446	DAZ3	Q9NR90	486 aa	Known RBP	5.03	□□□□□ -1.6
PUDP-204	ENST00000486446	FRAS1	Q86XX4	4008 aa		5.02	□□□□□ -1.61
PUDP-204	ENST00000486446	STARD9	Q9P2P6	4700 aa		5.02	□□□□□ -1.61
PUDP-204	ENST00000486446	TRAV4	A0A0B4J268	109 aa		5.02	□□□□□ -1.61
PUDP-204	ENST00000486446		H7C423	109 aa		5.02	□□□□□ -1.61
PUDP-204	ENST00000486446	HTN1	P15515	57 aa		5.02	□□□□□ -1.61
PUDP-204	ENST00000486446	AZU1	P20160	251 aa		5.02	□□□□□ -1.61
PUDP-204	ENST00000486446	SCGB1D4	Q6XE38	83 aa		5.02	□□□□□ -1.61
PUDP-204	ENST00000486446	GTSF1L	Q9H1H1	148 aa		5.02	□□□□□ -1.61
PUDP-204	ENST00000486446	APLN	Q9ULZ1	77 aa		5.02	□□□□□ -1.61
PUDP-204	ENST00000486446	ABCA13	Q86UQ4	5058 aa		5.02	□□□□□ -1.61
PUDP-204	ENST00000486446	TRBV20-1	A0A075B6N2	111 aa		5.01	□□□□□ -1.61
PUDP-204	ENST00000486446	IGLV5-45	A0A087WSX0	123 aa		5.01	□□□□□ -1.61
PUDP-204	ENST00000486446		A0A0B4J2C4	111 aa		5.01	□□□□□ -1.61
PUDP-204	ENST00000486446	TEX48	A0A1B0GUV7	120 aa		5.01	□□□□□ -1.61
PUDP-204	ENST00000486446	TINCR	A0A1B0GVN0	87 aa		5.01	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms