RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 LINC01561Q8N1V8 128 aa8.95□□□□□ -0.98
VTI1BP1-201ENST00000486325 RMI2Q96E14 147 aa8.95□□□□□ -0.98
VTI1BP1-201ENST00000486325 IGHV3OR16-9A0A0B4J2B5 98 aa8.94□□□□□ -0.98
VTI1BP1-201ENST00000486325 hDV102S1A0JD36 115 aa8.94□□□□□ -0.98
VTI1BP1-201ENST00000486325 XCL1P47992 114 aa8.94□□□□□ -0.98
VTI1BP1-201ENST00000486325 SPATA45Q537H7 98 aa8.94□□□□□ -0.98
VTI1BP1-201ENST00000486325 STPG4Q8N801 248 aa8.94□□□□□ -0.98
VTI1BP1-201ENST00000486325 CDKN2A-AS1Q9UH64 79 aa8.94□□□□□ -0.98
VTI1BP1-201ENST00000486325 COX11Q9Y6N1 276 aa8.94□□□□□ -0.98
VTI1BP1-201ENST00000486325 DYNC2H1Q8NCM8 4307 aaKnown RBP8.94□□□□□ -0.98
VTI1BP1-201ENST00000486325 A0A087WZ39 114 aa8.93□□□□□ -0.98
VTI1BP1-201ENST00000486325 TMEM223A0PJW6 202 aa8.93□□□□□ -0.98
VTI1BP1-201ENST00000486325 CDPF1Q6NVV7 123 aa8.93□□□□□ -0.98
VTI1BP1-201ENST00000486325 C1orf43Q9BWL3 253 aa8.93□□□□□ -0.98
VTI1BP1-201ENST00000486325 PAM16Q9Y3D7 125 aa8.93□□□□□ -0.98
VTI1BP1-201ENST00000486325 DNAH7Q8WXX0 4024 aa8.92□□□□□ -0.98
VTI1BP1-201ENST00000486325 IGLV10-54A0A075B6I4 117 aa8.92□□□□□ -0.98
VTI1BP1-201ENST00000486325 E9PLD3 99 aa8.92□□□□□ -0.98
VTI1BP1-201ENST00000486325 COX7A2LO14548 114 aa8.92□□□□□ -0.98
VTI1BP1-201ENST00000486325 MAJINQ3KP22 176 aa8.92□□□□□ -0.98
VTI1BP1-201ENST00000486325 PLEKHB2Q96CS7 222 aa8.92□□□□□ -0.98
VTI1BP1-201ENST00000486325 IGHV1-58A0A0C4DH39 117 aa8.91□□□□□ -0.98
VTI1BP1-201ENST00000486325 NBDYA0A0U1RRE5 68 aa8.91□□□□□ -0.98
VTI1BP1-201ENST00000486325 GAGE12HA6NDE8 117 aa8.91□□□□□ -0.98
VTI1BP1-201ENST00000486325 TM2D2Q9BX73 214 aa8.91□□□□□ -0.98
VTI1BP1-201ENST00000486325 IGKV2D-24A0A075B6R9 120 aa8.9□□□□□ -0.98
VTI1BP1-201ENST00000486325 LEPROTO15243 131 aa8.9□□□□□ -0.98
VTI1BP1-201ENST00000486325 APOMO95445 188 aa8.9□□□□□ -0.98
VTI1BP1-201ENST00000486325 MALP21145 153 aa8.9□□□□□ -0.98
VTI1BP1-201ENST00000486325 FOXI1Q12951 378 aa8.9□□□□□ -0.98
VTI1BP1-201ENST00000486325 ANKRD39Q53RE8 183 aa8.9□□□□□ -0.98
VTI1BP1-201ENST00000486325 C5orf38Q86SI9 138 aa8.9□□□□□ -0.98
VTI1BP1-201ENST00000486325 TENM2Q9NT68 2774 aa8.9□□□□□ -0.99
VTI1BP1-201ENST00000486325 SPINK8P0C7L1 97 aa8.89□□□□□ -0.99
VTI1BP1-201ENST00000486325 Q9HAA7 133 aa8.89□□□□□ -0.99
VTI1BP1-201ENST00000486325 IGLV5-39A0A0G2JS06 123 aa8.88□□□□□ -0.99
VTI1BP1-201ENST00000486325 SMIM1B2RUZ4 78 aa8.88□□□□□ -0.99
VTI1BP1-201ENST00000486325 NMUP48645 174 aa8.88□□□□□ -0.99
VTI1BP1-201ENST00000486325 CFAP161Q6P656 301 aa8.88□□□□□ -0.99
VTI1BP1-201ENST00000486325 TSTD3H0UI37 97 aa8.87□□□□□ -0.99
VTI1BP1-201ENST00000486325 J3QQQ9 107 aa8.87□□□□□ -0.99
VTI1BP1-201ENST00000486325 LY6G6CO95867 125 aa8.87□□□□□ -0.99
VTI1BP1-201ENST00000486325 COX8AP10176 69 aa8.87□□□□□ -0.99
VTI1BP1-201ENST00000486325 LGALS3P17931 250 aaKnown RBP8.87□□□□□ -0.99
VTI1BP1-201ENST00000486325 KRTAP26-1Q6PEX3 210 aa8.87□□□□□ -0.99
VTI1BP1-201ENST00000486325 CSMD3Q7Z407 3707 aa8.86□□□□□ -0.99
VTI1BP1-201ENST00000486325 PLECQ15149 4684 aaKnown RBP8.86□□□□□ -0.99
VTI1BP1-201ENST00000486325 IGKV2D-26A0A0A0MRZ7 120 aa8.86□□□□□ -0.99
VTI1BP1-201ENST00000486325 SLC25A34Q6PIV7 304 aa8.86□□□□□ -0.99
VTI1BP1-201ENST00000486325 LINC00476Q8WZB0 136 aa8.86□□□□□ -0.99
VTI1BP1-201ENST00000486325 IGHV3-64A0A075B6Q5 118 aa8.85□□□□□ -0.99
VTI1BP1-201ENST00000486325 DLEU1O43261 78 aa8.85□□□□□ -0.99
VTI1BP1-201ENST00000486325 PRSS2P07478 247 aa8.85□□□□□ -0.99
VTI1BP1-201ENST00000486325 C6orf226Q5I0X4 101 aa8.85□□□□□ -0.99
VTI1BP1-201ENST00000486325 SFTA2Q6UW10 78 aa8.85□□□□□ -0.99
VTI1BP1-201ENST00000486325 COX7B2Q8TF08 81 aa8.85□□□□□ -0.99
VTI1BP1-201ENST00000486325 C14orf144Q96I85 54 aa8.85□□□□□ -0.99
VTI1BP1-201ENST00000486325 UQCR10Q9UDW1 63 aa8.85□□□□□ -0.99
VTI1BP1-201ENST00000486325 STARD9Q9P2P6 4700 aa8.85□□□□□ -0.99
VTI1BP1-201ENST00000486325 BOD1L2Q8IYS8 172 aa8.84□□□□□ -0.99
VTI1BP1-201ENST00000486325 Q8IZM0 81 aa8.84□□□□□ -0.99
VTI1BP1-201ENST00000486325 KRTAP1-5Q9BYS1 174 aa8.84□□□□□ -0.99
VTI1BP1-201ENST00000486325 MYMXA0A1B0GTQ4 84 aa8.83□□□□□ -1
VTI1BP1-201ENST00000486325 ORAOV1Q8WV07 137 aa8.83□□□□□ -1
VTI1BP1-201ENST00000486325 MIEN1Q9BRT3 115 aa8.83□□□□□ -1
VTI1BP1-201ENST00000486325 PRO1933Q9H354 126 aa8.83□□□□□ -1
VTI1BP1-201ENST00000486325 TOMM7Q9P0U1 55 aa8.83□□□□□ -1
VTI1BP1-201ENST00000486325 ZNF815PA8K554 130 aa8.82□□□□□ -1
VTI1BP1-201ENST00000486325 F8WDY8 70 aa8.82□□□□□ -1
VTI1BP1-201ENST00000486325 PSCAO43653 123 aa8.82□□□□□ -1
VTI1BP1-201ENST00000486325 CXCL5P42830 114 aa8.82□□□□□ -1
VTI1BP1-201ENST00000486325 Q6ZR54 194 aa8.82□□□□□ -1
VTI1BP1-201ENST00000486325 PCP2Q8IVA1 136 aa8.82□□□□□ -1
VTI1BP1-201ENST00000486325 NDUFA12Q9UI09 145 aa8.82□□□□□ -1
VTI1BP1-201ENST00000486325 ZNF561-AS1K7EIQ3 104 aa8.81□□□□□ -1
VTI1BP1-201ENST00000486325 M0R2N4 97 aa8.81□□□□□ -1
VTI1BP1-201ENST00000486325 HERV-K104P63124 156 aa8.81□□□□□ -1
VTI1BP1-201ENST00000486325 LINC00587B1AMM8 73 aa8.8□□□□□ -1
VTI1BP1-201ENST00000486325 NDUFA1O15239 70 aa8.8□□□□□ -1
VTI1BP1-201ENST00000486325 TSPEAR-AS2P59090 65 aa8.8□□□□□ -1
VTI1BP1-201ENST00000486325 CKS1BP61024 79 aa8.8□□□□□ -1
VTI1BP1-201ENST00000486325 KIAA0087Q14695 138 aa8.8□□□□□ -1
VTI1BP1-201ENST00000486325 MAPKAPK5-AS1Q8N8E1 139 aa8.8□□□□□ -1
VTI1BP1-201ENST00000486325 SPAG11BQ08648 103 aa8.79□□□□□ -1
VTI1BP1-201ENST00000486325 SCGB1D4Q6XE38 83 aa8.79□□□□□ -1
VTI1BP1-201ENST00000486325 C6orf223Q8N319 242 aa8.79□□□□□ -1
VTI1BP1-201ENST00000486325 C2orf48Q96LS8 159 aa8.79□□□□□ -1
VTI1BP1-201ENST00000486325 CIRBPQ14011 172 aaKnown RBP8.78□□□□□ -1
VTI1BP1-201ENST00000486325 C14orf177Q52M58 125 aa8.78□□□□□ -1
VTI1BP1-201ENST00000486325 ZNF625Q96I27 306 aaPredicted RBP8.78□□□□□ -1
VTI1BP1-201ENST00000486325 TTTY13Q9BZ97 58 aa8.78□□□□□ -1
VTI1BP1-201ENST00000486325 HIGD1BQ9P298 99 aa8.78□□□□□ -1
VTI1BP1-201ENST00000486325 GVQW2A0A096LPI5 108 aaPredicted RBP8.77□□□□□ -1.01
VTI1BP1-201ENST00000486325 USP17L23D6RBM5 183 aa8.77□□□□□ -1.01
VTI1BP1-201ENST00000486325 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
VTI1BP1-201ENST00000486325 C15orf56Q8N910 161 aa8.77□□□□□ -1.01
VTI1BP1-201ENST00000486325 NTN5Q8WTR8 489 aaPredicted RBP8.77□□□□□ -1.01
VTI1BP1-201ENST00000486325 VPS13DQ5THJ4 4388 aa8.77□□□□□ -1.01
VTI1BP1-201ENST00000486325 HNRNPA3P51991 378 aaKnown RBP8.76□□□□□ -1.01
VTI1BP1-201ENST00000486325 A0A0J9YXY3 114 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms