RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 G0S2P27469 103 aa3.77□□□□□ -1.81
COPS3-208ENST00000486032 PDZD11Q5EBL8 140 aa3.77□□□□□ -1.81
COPS3-208ENST00000486032 Q6ZN92 141 aa3.77□□□□□ -1.81
COPS3-208ENST00000486032 TEX43Q6ZNM6 134 aa3.77□□□□□ -1.81
COPS3-208ENST00000486032 Q6ZR54 194 aa3.77□□□□□ -1.81
COPS3-208ENST00000486032 MRPL52Q86TS9 123 aaKnown RBP3.77□□□□□ -1.81
COPS3-208ENST00000486032 ZNF664Q8N3J9 261 aa3.77□□□□□ -1.81
COPS3-208ENST00000486032 TOMM6Q96B49 74 aa3.77□□□□□ -1.81
COPS3-208ENST00000486032 CHCHD1Q96BP2 118 aaKnown RBP3.77□□□□□ -1.81
COPS3-208ENST00000486032 C1orf43Q9BWL3 253 aa3.77□□□□□ -1.81
COPS3-208ENST00000486032 VCX2Q9H322 139 aa3.77□□□□□ -1.81
COPS3-208ENST00000486032 CDC42SE2Q9NRR3 84 aa3.77□□□□□ -1.81
COPS3-208ENST00000486032 SPANXA1Q9NS26 97 aa3.77□□□□□ -1.81
COPS3-208ENST00000486032 KIAA1109Q2LD37 5005 aa3.77□□□□□ -1.81
COPS3-208ENST00000486032 PKHD1P08F94 4074 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 A0A096LNJ9 63 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 LINC00959A0A1B0GUT2 108 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 GAGE12HA6NDE8 117 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 LINC01546A6NGU7 62 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 LECT2O14960 151 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 CCL25O15444 150 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 XCL1P47992 114 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 SS18Q15532 418 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 LINC00173Q6ZV60 143 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 NFE4Q86UQ8 179 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 RMI2Q96E14 147 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 TMEM141Q96I45 108 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 C2orf88Q9BSF0 95 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 TIMM21Q9BVV7 248 aa3.76□□□□□ -1.81
COPS3-208ENST00000486032 C9orf118A6NHY6 69 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 PRSS29PA6NIE9 313 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 IGIPA6NJ69 53 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.75□□□□□ -1.81
COPS3-208ENST00000486032 K7EP13 123 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 RTL8CO15255 209 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 S100A6P06703 90 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 PRSS1P07477 247 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 MIAQ16674 131 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 ERASQ7Z444 233 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 BAALCQ8WXS3 180 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 CHCHD10Q8WYQ3 142 aaPredicted RBP3.75□□□□□ -1.81
COPS3-208ENST00000486032 TIMM17AQ99595 171 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 TM2D2Q9BX73 214 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 PRR34Q9NV39 138 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 TMA7Q9Y2S6 64 aaKnown RBP3.75□□□□□ -1.81
COPS3-208ENST00000486032 PYGO1Q9Y3Y4 419 aa3.75□□□□□ -1.81
COPS3-208ENST00000486032 CSDC2Q9Y534 153 aaKnown RBP3.75□□□□□ -1.81
COPS3-208ENST00000486032 DNAH8Q96JB1 4490 aa3.74□□□□□ -1.81
COPS3-208ENST00000486032 TRAV8-4A0A0B4J246 113 aa3.74□□□□□ -1.81
COPS3-208ENST00000486032 A0A0J9YXV3 536 aa3.74□□□□□ -1.81
COPS3-208ENST00000486032 LINC01549A6NIU2 74 aa3.74□□□□□ -1.81
COPS3-208ENST00000486032 ATP5LO75964 103 aa3.74□□□□□ -1.81
COPS3-208ENST00000486032 LEPROTL1O95214 131 aa3.74□□□□□ -1.81
COPS3-208ENST00000486032 MRPS36P82909 103 aaKnown RBP3.74□□□□□ -1.81
COPS3-208ENST00000486032 PAPPA-AS1Q5QFB9 102 aa3.74□□□□□ -1.81
COPS3-208ENST00000486032 C5orf38Q86SI9 138 aa3.74□□□□□ -1.81
COPS3-208ENST00000486032 FAM104AQ969W3 186 aa3.74□□□□□ -1.81
COPS3-208ENST00000486032 IFI27L1Q96BM0 104 aa3.74□□□□□ -1.81
COPS3-208ENST00000486032 RYR1P21817 5038 aa3.74□□□□□ -1.81
COPS3-208ENST00000486032 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.73□□□□□ -1.81
COPS3-208ENST00000486032 MALP21145 153 aa3.73□□□□□ -1.81
COPS3-208ENST00000486032 S100A2P29034 98 aa3.73□□□□□ -1.81
COPS3-208ENST00000486032 FUSP35637 526 aaKnown RBP eCLIP3.73□□□□□ -1.81
COPS3-208ENST00000486032 UBE2D1P51668 147 aa3.73□□□□□ -1.81
COPS3-208ENST00000486032 SNRPEP62304 92 aaKnown RBP3.73□□□□□ -1.81
COPS3-208ENST00000486032 WFDC2Q14508 124 aa3.73□□□□□ -1.81
COPS3-208ENST00000486032 PMVKQ15126 192 aa3.73□□□□□ -1.81
COPS3-208ENST00000486032 HIGD2BQ4VC39 106 aa3.73□□□□□ -1.81
COPS3-208ENST00000486032 Q6ZRN7 208 aaPredicted RBP3.73□□□□□ -1.81
COPS3-208ENST00000486032 MAPKAPK5-AS1Q8N8E1 139 aa3.73□□□□□ -1.81
COPS3-208ENST00000486032 AMELXQ99217 191 aa3.73□□□□□ -1.81
COPS3-208ENST00000486032 GEMIN7Q9H840 131 aaKnown RBP3.73□□□□□ -1.81
COPS3-208ENST00000486032 HSPB8Q9UJY1 196 aa3.73□□□□□ -1.81
COPS3-208ENST00000486032 COX11Q9Y6N1 276 aa3.73□□□□□ -1.81
COPS3-208ENST00000486032 HSPG2P98160 4391 aa3.73□□□□□ -1.81
COPS3-208ENST00000486032 USP17L23D6RBM5 183 aa3.72□□□□□ -1.81
COPS3-208ENST00000486032 COX6A2Q02221 97 aa3.72□□□□□ -1.81
COPS3-208ENST00000486032 FOXI1Q12951 378 aa3.72□□□□□ -1.81
COPS3-208ENST00000486032 LINC00242Q5T6M2 205 aa3.72□□□□□ -1.81
COPS3-208ENST00000486032 KRTAP26-1Q6PEX3 210 aa3.72□□□□□ -1.81
COPS3-208ENST00000486032 CD164L2Q6UWJ8 174 aa3.72□□□□□ -1.81
COPS3-208ENST00000486032 LINC00336Q6ZUF6 198 aa3.72□□□□□ -1.81
COPS3-208ENST00000486032 PMCHL2Q9BQD1 86 aa3.72□□□□□ -1.81
COPS3-208ENST00000486032 MAP1LC3CQ9BXW4 147 aa3.72□□□□□ -1.81
COPS3-208ENST00000486032 CST9LQ9H4G1 147 aa3.72□□□□□ -1.81
COPS3-208ENST00000486032 CHTOPQ9Y3Y2 248 aaKnown RBP3.72□□□□□ -1.81
COPS3-208ENST00000486032 A0A087WTM6 91 aa3.71□□□□□ -1.82
COPS3-208ENST00000486032 hDV102S1A0JD36 115 aa3.71□□□□□ -1.82
COPS3-208ENST00000486032 LRCOL1A6NCL2 159 aa3.71□□□□□ -1.82
COPS3-208ENST00000486032 COX7A2LO14548 114 aa3.71□□□□□ -1.82
COPS3-208ENST00000486032 NPSP0C0P6 89 aa3.71□□□□□ -1.82
COPS3-208ENST00000486032 KRTDAPP60985 99 aa3.71□□□□□ -1.82
COPS3-208ENST00000486032 SEC11AP67812 179 aa3.71□□□□□ -1.82
COPS3-208ENST00000486032 COA6Q5JTJ3 125 aaKnown RBP3.71□□□□□ -1.82
COPS3-208ENST00000486032 SPATA12Q7Z6I5 190 aa3.71□□□□□ -1.82
COPS3-208ENST00000486032 LINC00469Q8N7U9 141 aa3.71□□□□□ -1.82
COPS3-208ENST00000486032 LINC00526Q96FQ7 95 aa3.71□□□□□ -1.82
COPS3-208ENST00000486032 PACRGQ96M98 296 aaPredicted RBP3.71□□□□□ -1.82
COPS3-208ENST00000486032 CHAC1Q9BUX1 264 aa3.71□□□□□ -1.82
COPS3-208ENST00000486032 TOMM7Q9P0U1 55 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms