RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 NRACQ8N912 160 aa8.26□□□□□ -1.09
HMG20B-211ENST00000486028 HSPB8Q9UJY1 196 aa8.26□□□□□ -1.09
HMG20B-211ENST00000486028 HSBP1L1C9JCN9 74 aa8.25□□□□□ -1.09
HMG20B-211ENST00000486028 LEPROTL1O95214 131 aa8.25□□□□□ -1.09
HMG20B-211ENST00000486028 TSHBP01222 138 aa8.25□□□□□ -1.09
HMG20B-211ENST00000486028 SUMO2P61956 95 aaKnown RBP8.25□□□□□ -1.09
HMG20B-211ENST00000486028 AMMECR1LQ6DCA0 310 aa8.25□□□□□ -1.09
HMG20B-211ENST00000486028 SLC25A34Q6PIV7 304 aa8.25□□□□□ -1.09
HMG20B-211ENST00000486028 MAPKAPK5-AS1Q8N8E1 139 aa8.25□□□□□ -1.09
HMG20B-211ENST00000486028 C20orf203Q8NBC4 194 aa8.25□□□□□ -1.09
HMG20B-211ENST00000486028 NTN5Q8WTR8 489 aaPredicted RBP8.25□□□□□ -1.09
HMG20B-211ENST00000486028 BAALCQ8WXS3 180 aa8.25□□□□□ -1.09
HMG20B-211ENST00000486028 MAP1LC3CQ9BXW4 147 aa8.25□□□□□ -1.09
HMG20B-211ENST00000486028 IGLV4-60A0A075B6I1 120 aa8.24□□□□□ -1.09
HMG20B-211ENST00000486028 LECT2O14960 151 aa8.24□□□□□ -1.09
HMG20B-211ENST00000486028 PPBPP02775 128 aa8.24□□□□□ -1.09
HMG20B-211ENST00000486028 FCER1GP30273 86 aa8.24□□□□□ -1.09
HMG20B-211ENST00000486028 FUSP35637 526 aaKnown RBP eCLIP8.24□□□□□ -1.09
HMG20B-211ENST00000486028 REG3AQ06141 175 aa8.24□□□□□ -1.09
HMG20B-211ENST00000486028 CLPSL2Q6UWE3 100 aa8.24□□□□□ -1.09
HMG20B-211ENST00000486028 KIR2DL4Q99706 377 aa8.24□□□□□ -1.09
HMG20B-211ENST00000486028 C20orf78Q9BR46 151 aa8.24□□□□□ -1.09
HMG20B-211ENST00000486028 KIAA1109Q2LD37 5005 aa8.23□□□□□ -1.09
HMG20B-211ENST00000486028 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.23□□□□□ -1.09
HMG20B-211ENST00000486028 IGLV5-52A0A0A0MRZ9 124 aa8.23□□□□□ -1.09
HMG20B-211ENST00000486028 TRAV8-4A0A0B4J246 113 aa8.23□□□□□ -1.09
HMG20B-211ENST00000486028 IGKV2-29A2NJV5 120 aaPredicted RBP8.23□□□□□ -1.09
HMG20B-211ENST00000486028 TAX1BP3O14907 124 aa8.23□□□□□ -1.09
HMG20B-211ENST00000486028 FGF6P10767 208 aa8.23□□□□□ -1.09
HMG20B-211ENST00000486028 PCP4P48539 62 aa8.23□□□□□ -1.09
HMG20B-211ENST00000486028 WFDC2Q14508 124 aa8.23□□□□□ -1.09
HMG20B-211ENST00000486028 BVES-AS1Q5T3Y7 98 aa8.23□□□□□ -1.09
HMG20B-211ENST00000486028 LINC01545Q5VT33 79 aa8.23□□□□□ -1.09
HMG20B-211ENST00000486028 LINC00173Q6ZV60 143 aa8.23□□□□□ -1.09
HMG20B-211ENST00000486028 D6R8Y8 96 aa8.22□□□□□ -1.09
HMG20B-211ENST00000486028 GCSHP23434 173 aa8.22□□□□□ -1.09
HMG20B-211ENST00000486028 ORMDL3Q8N138 153 aa8.22□□□□□ -1.09
HMG20B-211ENST00000486028 TMEM101Q96IK0 257 aa8.22□□□□□ -1.09
HMG20B-211ENST00000486028 hDV102S1A0JD36 115 aa8.21□□□□□ -1.1
HMG20B-211ENST00000486028 CDK2AP2O75956 126 aa8.21□□□□□ -1.1
HMG20B-211ENST00000486028 RPL32P62910 135 aaKnown RBP8.21□□□□□ -1.1
HMG20B-211ENST00000486028 VAMP3Q15836 100 aa8.21□□□□□ -1.1
HMG20B-211ENST00000486028 C14orf177Q52M58 125 aa8.21□□□□□ -1.1
HMG20B-211ENST00000486028 PLA2G2DQ9UNK4 145 aa8.21□□□□□ -1.1
HMG20B-211ENST00000486028 LRP1BQ9NZR2 4599 aa8.21□□□□□ -1.1
HMG20B-211ENST00000486028 COX8AP10176 69 aa8.2□□□□□ -1.1
HMG20B-211ENST00000486028 SMAGPQ0VAQ4 97 aa8.2□□□□□ -1.1
HMG20B-211ENST00000486028 Q6ZVH6 145 aa8.2□□□□□ -1.1
HMG20B-211ENST00000486028 OR5A1Q8NGJ0 315 aa8.2□□□□□ -1.1
HMG20B-211ENST00000486028 PRELID3AQ96N28 172 aa8.2□□□□□ -1.1
HMG20B-211ENST00000486028 IGLV10-54A0A075B6I4 117 aa8.19□□□□□ -1.1
HMG20B-211ENST00000486028 NPYP01303 97 aa8.19□□□□□ -1.1
HMG20B-211ENST00000486028 DGAT2L7PQ6IED9 249 aa8.19□□□□□ -1.1
HMG20B-211ENST00000486028 KRTAP26-1Q6PEX3 210 aa8.19□□□□□ -1.1
HMG20B-211ENST00000486028 SMIM2Q9BVW6 85 aa8.19□□□□□ -1.1
HMG20B-211ENST00000486028 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.18□□□□□ -1.1
HMG20B-211ENST00000486028 IGKV3OR2-268A0A0C4DH90 116 aa8.18□□□□□ -1.1
HMG20B-211ENST00000486028 USP17L23D6RBM5 183 aa8.18□□□□□ -1.1
HMG20B-211ENST00000486028 KRTAP10-1P60331 282 aa8.18□□□□□ -1.1
HMG20B-211ENST00000486028 SEC11AP67812 179 aa8.18□□□□□ -1.1
HMG20B-211ENST00000486028 FA2HQ7L5A8 372 aa8.18□□□□□ -1.1
HMG20B-211ENST00000486028 DNAH5Q8TE73 4624 aa8.18□□□□□ -1.1
HMG20B-211ENST00000486028 HERC2O95714 4834 aa8.18□□□□□ -1.1
HMG20B-211ENST00000486028 LORP23490 312 aaPredicted RBP8.17□□□□□ -1.1
HMG20B-211ENST00000486028 C2orf91Q6ZV80 131 aa8.16□□□□□ -1.1
HMG20B-211ENST00000486028 PRSS3P2Q8NHM4 247 aa8.16□□□□□ -1.1
HMG20B-211ENST00000486028 MAP1LC3AQ9H492 121 aa8.16□□□□□ -1.1
HMG20B-211ENST00000486028 CDC42SE2Q9NRR3 84 aa8.16□□□□□ -1.1
HMG20B-211ENST00000486028 CSDC2Q9Y534 153 aaKnown RBP8.16□□□□□ -1.1
HMG20B-211ENST00000486028 RYR1P21817 5038 aa8.15□□□□□ -1.1
HMG20B-211ENST00000486028 GAGE12HA6NDE8 117 aa8.15□□□□□ -1.1
HMG20B-211ENST00000486028 CHCHD10Q8WYQ3 142 aaPredicted RBP8.15□□□□□ -1.1
HMG20B-211ENST00000486028 TIMM21Q9BVV7 248 aa8.15□□□□□ -1.1
HMG20B-211ENST00000486028 CST9LQ9H4G1 147 aa8.15□□□□□ -1.1
HMG20B-211ENST00000486028 LOC389332A0A1B0GUA5 103 aa8.14□□□□□ -1.11
HMG20B-211ENST00000486028 LINC00959A0A1B0GUT2 108 aa8.14□□□□□ -1.11
HMG20B-211ENST00000486028 H3BRM9 83 aa8.14□□□□□ -1.11
HMG20B-211ENST00000486028 SS18Q15532 418 aa8.14□□□□□ -1.11
HMG20B-211ENST00000486028 UBE2D4Q9Y2X8 147 aa8.14□□□□□ -1.11
HMG20B-211ENST00000486028 PRSS1P07477 247 aa8.13□□□□□ -1.11
HMG20B-211ENST00000486028 OCIAD2Q56VL3 154 aa8.13□□□□□ -1.11
HMG20B-211ENST00000486028 HSPG2P98160 4391 aa8.12□□□□□ -1.11
HMG20B-211ENST00000486028 A0A096LNJ9 63 aa8.12□□□□□ -1.11
HMG20B-211ENST00000486028 LINC01546A6NGU7 62 aa8.12□□□□□ -1.11
HMG20B-211ENST00000486028 C9orf118A6NHY6 69 aa8.12□□□□□ -1.11
HMG20B-211ENST00000486028 XCL1P47992 114 aa8.12□□□□□ -1.11
HMG20B-211ENST00000486028 RPL39P62891 51 aaKnown RBP8.12□□□□□ -1.11
HMG20B-211ENST00000486028 HSD52Q0P140 79 aa8.12□□□□□ -1.11
HMG20B-211ENST00000486028 BOD1L2Q8IYS8 172 aa8.12□□□□□ -1.11
HMG20B-211ENST00000486028 Q8N8P6 123 aa8.12□□□□□ -1.11
HMG20B-211ENST00000486028 SPANXA1Q9NS26 97 aa8.12□□□□□ -1.11
HMG20B-211ENST00000486028 TP73-AS1Q9UF72 201 aa8.12□□□□□ -1.11
HMG20B-211ENST00000486028 APOBP04114 4563 aaKnown RBP8.12□□□□□ -1.11
HMG20B-211ENST00000486028 A6NDN8 102 aa8.11□□□□□ -1.11
HMG20B-211ENST00000486028 HBDP02042 147 aa8.11□□□□□ -1.11
HMG20B-211ENST00000486028 IFI27P40305 119 aaPredicted RBP8.11□□□□□ -1.11
HMG20B-211ENST00000486028 XGP55808 180 aa8.11□□□□□ -1.11
HMG20B-211ENST00000486028 RNF151Q2KHN1 245 aa8.11□□□□□ -1.11
HMG20B-211ENST00000486028 NXT2Q9NPJ8 142 aaKnown RBP8.11□□□□□ -1.11
HMG20B-211ENST00000486028 K7EMI3 77 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms