RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 PCDH15Q96QU1 1955 aa7.75□□□□□ -1.17
SRGAP3-207ENST00000485983 M0QXV9 152 aa7.75□□□□□ -1.17
SRGAP3-207ENST00000485983 TIMM17BO60830 172 aa7.75□□□□□ -1.17
SRGAP3-207ENST00000485983 ZNF73O43830 326 aaPredicted RBP7.74□□□□□ -1.17
SRGAP3-207ENST00000485983 MRPL55Q7Z7F7 128 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-207ENST00000485983 V9GYY9 64 aa7.74□□□□□ -1.17
SRGAP3-207ENST00000485983 MPLKIPQ8TAP9 179 aa7.74□□□□□ -1.17
SRGAP3-207ENST00000485983 MRPS36P82909 103 aaKnown RBP7.74□□□□□ -1.17
SRGAP3-207ENST00000485983 CIRBP-AS1Q8TBR5 109 aa7.74□□□□□ -1.17
SRGAP3-207ENST00000485983 G3V4G9 280 aa7.74□□□□□ -1.17
SRGAP3-207ENST00000485983 C1orf134Q5TEV5 83 aa7.74□□□□□ -1.17
SRGAP3-207ENST00000485983 TRBV30A0A0K0K1B3 111 aa7.73□□□□□ -1.17
SRGAP3-207ENST00000485983 TSHBP01222 138 aa7.73□□□□□ -1.17
SRGAP3-207ENST00000485983 FAM19A3Q7Z5A8 133 aa7.73□□□□□ -1.17
SRGAP3-207ENST00000485983 KLLNB2CW77 178 aa7.73□□□□□ -1.17
SRGAP3-207ENST00000485983 Q6ZS46 218 aa7.73□□□□□ -1.17
SRGAP3-207ENST00000485983 FAM236DA0A1B0GTK5 79 aa7.73□□□□□ -1.17
SRGAP3-207ENST00000485983 CYSRT1A8MQ03 144 aa7.73□□□□□ -1.17
SRGAP3-207ENST00000485983 FAM236CP0DP71 79 aa7.73□□□□□ -1.17
SRGAP3-207ENST00000485983 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.73□□□□□ -1.17
SRGAP3-207ENST00000485983 Q8IZM0 81 aa7.73□□□□□ -1.17
SRGAP3-207ENST00000485983 TRIAP1O43715 76 aa7.72□□□□□ -1.17
SRGAP3-207ENST00000485983 RNASE3P12724 160 aaKnown RBP7.72□□□□□ -1.17
SRGAP3-207ENST00000485983 RETNQ9HD89 108 aa7.72□□□□□ -1.17
SRGAP3-207ENST00000485983 CRIP1P50238 77 aa7.72□□□□□ -1.17
SRGAP3-207ENST00000485983 LST1O00453 97 aa7.72□□□□□ -1.17
SRGAP3-207ENST00000485983 C2CD3Q4AC94 2353 aa7.72□□□□□ -1.17
SRGAP3-207ENST00000485983 EGFEM1PQ0D2K5 195 aa7.72□□□□□ -1.17
SRGAP3-207ENST00000485983 COL4A4P53420 1690 aaPredicted RBP7.71□□□□□ -1.17
SRGAP3-207ENST00000485983 EIF4EBP1Q13541 118 aaPredicted RBP7.71□□□□□ -1.18
SRGAP3-207ENST00000485983 RNF185Q96GF1 192 aa7.71□□□□□ -1.18
SRGAP3-207ENST00000485983 UQCRQO14949 82 aa7.71□□□□□ -1.18
SRGAP3-207ENST00000485983 BRI3O95415 125 aa7.71□□□□□ -1.18
SRGAP3-207ENST00000485983 PRYO14603 147 aa7.7□□□□□ -1.18
SRGAP3-207ENST00000485983 FAM240AA0A1B0GVK7 77 aa7.7□□□□□ -1.18
SRGAP3-207ENST00000485983 A8MZ25 164 aa7.7□□□□□ -1.18
SRGAP3-207ENST00000485983 KRTAP10-9P60411 292 aa7.7□□□□□ -1.18
SRGAP3-207ENST00000485983 NHLRC4P0CG21 123 aaPredicted RBP7.7□□□□□ -1.18
SRGAP3-207ENST00000485983 AVPP01185 164 aa7.69□□□□□ -1.18
SRGAP3-207ENST00000485983 C6orf223Q8N319 242 aa7.69□□□□□ -1.18
SRGAP3-207ENST00000485983 NDUFC1O43677 76 aa7.69□□□□□ -1.18
SRGAP3-207ENST00000485983 IGLV1-51P01701 117 aa7.69□□□□□ -1.18
SRGAP3-207ENST00000485983 OBSL1O75147 1896 aa7.69□□□□□ -1.18
SRGAP3-207ENST00000485983 NDUFC2-KCTD14E9PQ53 114 aa7.69□□□□□ -1.18
SRGAP3-207ENST00000485983 PRM2P04554 102 aa7.69□□□□□ -1.18
SRGAP3-207ENST00000485983 NDUFV3P56181 108 aaKnown RBP7.69□□□□□ -1.18
SRGAP3-207ENST00000485983 CDC42SE2Q9NRR3 84 aa7.69□□□□□ -1.18
SRGAP3-207ENST00000485983 ODF3L2Q3SX64 289 aa7.69□□□□□ -1.18
SRGAP3-207ENST00000485983 REG3GQ6UW15 175 aa7.69□□□□□ -1.18
SRGAP3-207ENST00000485983 SMIM11BQ8TCY0 68 aa7.68□□□□□ -1.18
SRGAP3-207ENST00000485983 KIAA1549LQ6ZVL6 1849 aa7.68□□□□□ -1.18
SRGAP3-207ENST00000485983 Q6ZTC4 211 aa7.68□□□□□ -1.18
SRGAP3-207ENST00000485983 SERP2Q8N6R1 65 aa7.68□□□□□ -1.18
SRGAP3-207ENST00000485983 ZNF106Q9H2Y7 1883 aaKnown RBP7.68□□□□□ -1.18
SRGAP3-207ENST00000485983 LINC01556Q5JQF7 62 aa7.68□□□□□ -1.18
SRGAP3-207ENST00000485983 C1orf137Q5JT78 98 aa7.68□□□□□ -1.18
SRGAP3-207ENST00000485983 Q6ZPA2 131 aa7.68□□□□□ -1.18
SRGAP3-207ENST00000485983 ATP5EP56381 51 aaPredicted RBP7.67□□□□□ -1.18
SRGAP3-207ENST00000485983 LRRK2Q5S007 2527 aa7.67□□□□□ -1.18
SRGAP3-207ENST00000485983 MAPKAPK5-AS1Q8N8E1 139 aa7.67□□□□□ -1.18
SRGAP3-207ENST00000485983 POLR2KP53803 58 aaKnown RBP7.67□□□□□ -1.18
SRGAP3-207ENST00000485983 PRR9Q5T870 116 aa7.67□□□□□ -1.18
SRGAP3-207ENST00000485983 UNQ6190/PRO20217Q6UXQ8 127 aa7.67□□□□□ -1.18
SRGAP3-207ENST00000485983 C16orf95Q9H693 158 aa7.67□□□□□ -1.18
SRGAP3-207ENST00000485983 PLXNB1O43157 2135 aa7.66□□□□□ -1.18
SRGAP3-207ENST00000485983 ESRGQ1W209 222 aa7.66□□□□□ -1.18
SRGAP3-207ENST00000485983 A6NED7 52 aa7.66□□□□□ -1.18
SRGAP3-207ENST00000485983 NRACQ8N912 160 aa7.66□□□□□ -1.18
SRGAP3-207ENST00000485983 IGLV2-11P01706 119 aa7.65□□□□□ -1.18
SRGAP3-207ENST00000485983 CDSNQ15517 529 aa7.65□□□□□ -1.18
SRGAP3-207ENST00000485983 X6R8D5 127 aa7.65□□□□□ -1.18
SRGAP3-207ENST00000485983 ARHGAP21Q5T5U3 1957 aa7.65□□□□□ -1.18
SRGAP3-207ENST00000485983 Q6JHZ5 121 aa7.65□□□□□ -1.18
SRGAP3-207ENST00000485983 TP73-AS1Q9UF72 201 aa7.65□□□□□ -1.19
SRGAP3-207ENST00000485983 PRR4Q16378 134 aa7.65□□□□□ -1.19
SRGAP3-207ENST00000485983 C11orf21Q9P2W6 132 aa7.65□□□□□ -1.19
SRGAP3-207ENST00000485983 ZFYVE26Q68DK2 2539 aa7.64□□□□□ -1.19
SRGAP3-207ENST00000485983 RNASE8Q8TDE3 154 aaKnown RBP7.64□□□□□ -1.19
SRGAP3-207ENST00000485983 ZNF295-AS1Q8N0V1 137 aa7.64□□□□□ -1.19
SRGAP3-207ENST00000485983 MYO9AB2RTY4 2548 aa7.64□□□□□ -1.19
SRGAP3-207ENST00000485983 F8WDY8 70 aa7.63□□□□□ -1.19
SRGAP3-207ENST00000485983 LINC00337Q8N6G1 96 aa7.63□□□□□ -1.19
SRGAP3-207ENST00000485983 IGHV6-1A0A0B4J1U7 121 aa7.63□□□□□ -1.19
SRGAP3-207ENST00000485983 CRIP3Q6Q6R5 217 aa7.63□□□□□ -1.19
SRGAP3-207ENST00000485983 FAM30AQ9NZY2 134 aa7.62□□□□□ -1.19
SRGAP3-207ENST00000485983 SNURFQ9Y675 71 aa7.62□□□□□ -1.19
SRGAP3-207ENST00000485983 MRPS12O15235 138 aaKnown RBP7.62□□□□□ -1.19
SRGAP3-207ENST00000485983 MT-ATP8P03928 68 aa7.62□□□□□ -1.19
SRGAP3-207ENST00000485983 NTM-AS1Q6ZSK4 140 aa7.62□□□□□ -1.19
SRGAP3-207ENST00000485983 FASNP49327 2511 aaKnown RBP7.62□□□□□ -1.19
SRGAP3-207ENST00000485983 COX6A2Q02221 97 aa7.62□□□□□ -1.19
SRGAP3-207ENST00000485983 PTPRSQ13332 1948 aa7.62□□□□□ -1.19
SRGAP3-207ENST00000485983 TRBV10-3A0A0K0K1G6 114 aa7.61□□□□□ -1.19
SRGAP3-207ENST00000485983 LIMD2Q9BT23 127 aa7.61□□□□□ -1.19
SRGAP3-207ENST00000485983 MKI67P46013 3256 aaKnown RBP7.61□□□□□ -1.19
SRGAP3-207ENST00000485983 POM121L12Q8N7R1 296 aa7.61□□□□□ -1.19
SRGAP3-207ENST00000485983 LINC00242Q5T6M2 205 aa7.61□□□□□ -1.19
SRGAP3-207ENST00000485983 C2orf48Q96LS8 159 aa7.6□□□□□ -1.19
SRGAP3-207ENST00000485983 Q9BRP9 147 aa7.6□□□□□ -1.19
SRGAP3-207ENST00000485983 CEP295Q9C0D2 2601 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms