RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 IGLV4-3A0A075B6K6 122 aa8.02□□□□□ -1.13
PTCD1-205ENST00000485746 TGIF2-C20orf24A0A0A6YYL0 155 aa8.02□□□□□ -1.13
PTCD1-205ENST00000485746 MT-ND6P03923 174 aa8.02□□□□□ -1.13
PTCD1-205ENST00000485746 SYCNQ0VAF6 134 aa8.02□□□□□ -1.13
PTCD1-205ENST00000485746 MAJINQ3KP22 176 aa8.02□□□□□ -1.13
PTCD1-205ENST00000485746 SVBPQ8N300 66 aa8.02□□□□□ -1.13
PTCD1-205ENST00000485746 MRPL18Q9H0U6 180 aaKnown RBP8.02□□□□□ -1.13
PTCD1-205ENST00000485746 VCX2Q9H322 139 aa8.02□□□□□ -1.13
PTCD1-205ENST00000485746 IGLV4-69A0A075B6H9 119 aa8.01□□□□□ -1.13
PTCD1-205ENST00000485746 IGKV2-24A0A0C4DH68 120 aa8.01□□□□□ -1.13
PTCD1-205ENST00000485746 CHTF8P0CG12 524 aa8.01□□□□□ -1.13
PTCD1-205ENST00000485746 CAMK2N2Q96S95 79 aa8.01□□□□□ -1.13
PTCD1-205ENST00000485746 PANO1I0J062 215 aa8□□□□□ -1.13
PTCD1-205ENST00000485746 SPAG11BQ08648 103 aa8□□□□□ -1.13
PTCD1-205ENST00000485746 PAPPA-AS1Q5QFB9 102 aa8□□□□□ -1.13
PTCD1-205ENST00000485746 FA2HQ7L5A8 372 aa8□□□□□ -1.13
PTCD1-205ENST00000485746 ORAOV1Q8WV07 137 aa8□□□□□ -1.13
PTCD1-205ENST00000485746 FAM104AQ969W3 186 aa8□□□□□ -1.13
PTCD1-205ENST00000485746 ALKBH7Q9BT30 221 aaPredicted RBP8□□□□□ -1.13
PTCD1-205ENST00000485746 SMCO4Q9NRQ5 59 aa8□□□□□ -1.13
PTCD1-205ENST00000485746 TRAPPC1Q9Y5R8 145 aa8□□□□□ -1.13
PTCD1-205ENST00000485746 DNAH8Q96JB1 4490 aa7.99□□□□□ -1.13
PTCD1-205ENST00000485746 A0A087WYN8 130 aa7.99□□□□□ -1.13
PTCD1-205ENST00000485746 RPL37AP61513 92 aaKnown RBP7.99□□□□□ -1.13
PTCD1-205ENST00000485746 SCGB3A1Q96QR1 104 aa7.99□□□□□ -1.13
PTCD1-205ENST00000485746 IGHV3OR16-9A0A0B4J2B5 98 aa7.98□□□□□ -1.13
PTCD1-205ENST00000485746 ZC2HC1BQ5TFG8 222 aa7.98□□□□□ -1.13
PTCD1-205ENST00000485746 OR10D4PQ8NGN7 298 aa7.98□□□□□ -1.13
PTCD1-205ENST00000485746 SPACA4Q8TDM5 124 aa7.98□□□□□ -1.13
PTCD1-205ENST00000485746 TOMM6Q96B49 74 aa7.98□□□□□ -1.13
PTCD1-205ENST00000485746 C2orf48Q96LS8 159 aa7.98□□□□□ -1.13
PTCD1-205ENST00000485746 LINC00474Q9P2X8 69 aa7.98□□□□□ -1.13
PTCD1-205ENST00000485746 NPSP0C0P6 89 aa7.97□□□□□ -1.13
PTCD1-205ENST00000485746 UBE2D1P51668 147 aa7.97□□□□□ -1.13
PTCD1-205ENST00000485746 GAGE2BQ13066 116 aa7.97□□□□□ -1.13
PTCD1-205ENST00000485746 CIRBPQ14011 172 aaKnown RBP7.97□□□□□ -1.13
PTCD1-205ENST00000485746 LINC00242Q5T6M2 205 aa7.97□□□□□ -1.13
PTCD1-205ENST00000485746 Q6ZRU5 148 aa7.97□□□□□ -1.13
PTCD1-205ENST00000485746 A0A096LNI7 61 aa7.96□□□□□ -1.14
PTCD1-205ENST00000485746 LOC107984640A0A0U1RRK4 108 aa7.96□□□□□ -1.14
PTCD1-205ENST00000485746 IGIPA6NJ69 53 aa7.96□□□□□ -1.14
PTCD1-205ENST00000485746 STPG4Q8N801 248 aa7.96□□□□□ -1.14
PTCD1-205ENST00000485746 C7orf33Q8WU49 177 aa7.96□□□□□ -1.14
PTCD1-205ENST00000485746 AMELXQ99217 191 aa7.96□□□□□ -1.14
PTCD1-205ENST00000485746 LINC01549A6NIU2 74 aa7.95□□□□□ -1.14
PTCD1-205ENST00000485746 F8WDY8 70 aa7.95□□□□□ -1.14
PTCD1-205ENST00000485746 NDUFA1O15239 70 aa7.95□□□□□ -1.14
PTCD1-205ENST00000485746 SEC11AP67812 179 aa7.95□□□□□ -1.14
PTCD1-205ENST00000485746 RPL18AQ02543 176 aaKnown RBP7.95□□□□□ -1.14
PTCD1-205ENST00000485746 ERASQ7Z444 233 aa7.95□□□□□ -1.14
PTCD1-205ENST00000485746 TIMM17AQ99595 171 aa7.95□□□□□ -1.14
PTCD1-205ENST00000485746 GEMIN7Q9H840 131 aaKnown RBP7.95□□□□□ -1.14
PTCD1-205ENST00000485746 FAT1Q14517 4588 aa7.94□□□□□ -1.14
PTCD1-205ENST00000485746 A0A087WZ39 114 aa7.94□□□□□ -1.14
PTCD1-205ENST00000485746 PRSS2P07478 247 aa7.94□□□□□ -1.14
PTCD1-205ENST00000485746 LINC00173Q6ZV60 143 aa7.94□□□□□ -1.14
PTCD1-205ENST00000485746 PLAC8Q9NZF1 115 aa7.94□□□□□ -1.14
PTCD1-205ENST00000485746 PCLOQ9Y6V0 5065 aa7.94□□□□□ -1.14
PTCD1-205ENST00000485746 ABCA13Q86UQ4 5058 aa7.93□□□□□ -1.14
PTCD1-205ENST00000485746 A0A0J9YXV3 536 aa7.93□□□□□ -1.14
PTCD1-205ENST00000485746 HERVK_113P63121 156 aa7.93□□□□□ -1.14
PTCD1-205ENST00000485746 PACRGQ96M98 296 aaPredicted RBP7.93□□□□□ -1.14
PTCD1-205ENST00000485746 TOMM7Q9P0U1 55 aa7.93□□□□□ -1.14
PTCD1-205ENST00000485746 LINC01546A6NGU7 62 aa7.92□□□□□ -1.14
PTCD1-205ENST00000485746 PTTG1IPP53801 180 aa7.92□□□□□ -1.14
PTCD1-205ENST00000485746 RAB5BP61020 215 aa7.92□□□□□ -1.14
PTCD1-205ENST00000485746 RNF151Q2KHN1 245 aa7.92□□□□□ -1.14
PTCD1-205ENST00000485746 LINC01561Q8N1V8 128 aa7.92□□□□□ -1.14
PTCD1-205ENST00000485746 J3QL48 77 aa7.91□□□□□ -1.14
PTCD1-205ENST00000485746 LINC00614P0C842 121 aa7.91□□□□□ -1.14
PTCD1-205ENST00000485746 NDUFA6P56556 154 aa7.91□□□□□ -1.14
PTCD1-205ENST00000485746 C6orf226Q5I0X4 101 aa7.91□□□□□ -1.14
PTCD1-205ENST00000485746 UNQ6190/PRO20217Q6UXQ8 127 aa7.91□□□□□ -1.14
PTCD1-205ENST00000485746 SLC7A5P1Q8MH63 180 aa7.91□□□□□ -1.14
PTCD1-205ENST00000485746 MRPL35Q9NZE8 188 aaKnown RBP7.91□□□□□ -1.14
PTCD1-205ENST00000485746 VPS13BQ7Z7G8 4022 aa7.91□□□□□ -1.14
PTCD1-205ENST00000485746 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.9□□□□□ -1.14
PTCD1-205ENST00000485746 CKS1BP61024 79 aa7.9□□□□□ -1.14
PTCD1-205ENST00000485746 C10orf25Q5T742 122 aa7.9□□□□□ -1.14
PTCD1-205ENST00000485746 LINC00469Q8N7U9 141 aa7.9□□□□□ -1.14
PTCD1-205ENST00000485746 C18orf32Q8TCD1 76 aa7.9□□□□□ -1.14
PTCD1-205ENST00000485746 PMVKQ15126 192 aa7.89□□□□□ -1.15
PTCD1-205ENST00000485746 FAM19A3Q7Z5A8 133 aa7.89□□□□□ -1.15
PTCD1-205ENST00000485746 CST9LQ9H4G1 147 aa7.89□□□□□ -1.15
PTCD1-205ENST00000485746 CDKN2A-AS1Q9UH64 79 aa7.89□□□□□ -1.15
PTCD1-205ENST00000485746 KIAA0087Q14695 138 aa7.88□□□□□ -1.15
PTCD1-205ENST00000485746 GAGE2EQ4V326 116 aa7.88□□□□□ -1.15
PTCD1-205ENST00000485746 C2orf82Q6UX34 121 aa7.88□□□□□ -1.15
PTCD1-205ENST00000485746 C6orf48Q9UBA6 75 aa7.88□□□□□ -1.15
PTCD1-205ENST00000485746 GAGE2DQ9UEU5 116 aa7.88□□□□□ -1.15
PTCD1-205ENST00000485746 TRBV30A0A0K0K1B3 111 aa7.87□□□□□ -1.15
PTCD1-205ENST00000485746 TINCRA0A1B0GVN0 87 aa7.87□□□□□ -1.15
PTCD1-205ENST00000485746 HBDP02042 147 aa7.87□□□□□ -1.15
PTCD1-205ENST00000485746 KRTAP10-4P60372 401 aaPredicted RBP7.87□□□□□ -1.15
PTCD1-205ENST00000485746 PMCHL1Q16048 86 aa7.87□□□□□ -1.15
PTCD1-205ENST00000485746 CBLN2Q8IUK8 224 aa7.87□□□□□ -1.15
PTCD1-205ENST00000485746 C9orf116Q5BN46 136 aaPredicted RBP7.86□□□□□ -1.15
PTCD1-205ENST00000485746 Q8IZM0 81 aa7.86□□□□□ -1.15
PTCD1-205ENST00000485746 SRRM2Q9UQ35 2752 aaKnown RBP7.85□□□□□ -1.15
PTCD1-205ENST00000485746 A0A1W2PNN7 141 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms