RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 ZNF702PQ9H963 129 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 MGAQ8IWI9 3026 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 DCHS2Q6V1P9 2916 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 MAP1BP46821 2468 aaKnown RBP3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 CEP250Q9BV73 2442 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 WNK2Q9Y3S1 2297 aa3.31□□□□□ -1.88
SMARCC1-206ENST00000485737 CNOT1A5YKK6 2376 aaKnown RBP3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 IBA57-AS1B1ANH7 110 aa3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 NTM-AS1Q6ZSK4 140 aa3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 COX7B2Q8TF08 81 aa3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 UPK3BQ9BT76 320 aa3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 TMEM243Q9BU79 118 aa3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 SND1-IT1Q9HBX3 110 aa3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 KLK5Q9Y337 293 aaPredicted RBP3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 ASPMQ8IZT6 3477 aa3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 TLN1Q9Y490 2541 aaKnown RBP3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 EP300Q09472 2414 aaPredicted RBP3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 TPRP12270 2363 aaKnown RBP3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 PCNX1Q96RV3 2341 aa3.3□□□□□ -1.88
SMARCC1-206ENST00000485737 ACACAQ13085 2346 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 A0A096LNT2 108 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 TRAV13-1A0A0B4J241 112 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 TRAV25A0A0B4J276 109 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 HTN1P15515 57 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 ATP5J2P56134 94 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 C5orf47Q569G3 176 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 S100A7L2Q5SY68 101 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 C1orf158Q8N1D5 194 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 MIR7-3HGQ8N6C7 128 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 SERP2Q8N6R1 65 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 C3orf56Q8N813 242 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 SMIM11BQ8TCY0 68 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 C4orf3Q8WVX3 66 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 NACAE9PAV3 2078 aa3.29□□□□□ -1.88
SMARCC1-206ENST00000485737 PRRC2AP48634 2157 aaKnown RBP3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 TACC2O95359 2948 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 DCHS1Q96JQ0 3298 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 A0A087WYN8 130 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 A0A0U1RRA0 63 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 NDUFC2-KCTD14E9PQ53 114 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 PRM2P04554 102 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 CCL18P55774 89 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 SS18Q15532 418 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 DEFB114Q30KQ6 69 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 ODF3L2Q3SX64 289 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 LINC01561Q8N1V8 128 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 C11orf44Q8N8P7 122 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 Q9HAA7 133 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 DMXL1Q9Y485 3027 aa3.28□□□□□ -1.88
SMARCC1-206ENST00000485737 PTPRQQ9UMZ3 2332 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 A0A087WZ39 114 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 TRGV1A0A0A0MS02 117 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 IGHV3OR16-9A0A0B4J2B5 98 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 TRBV10-3A0A0K0K1G6 114 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 TRBV6-4A0A1B0GX49 114 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 hADV29S1A0JD25 119 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 SMIM9A6NGZ8 99 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 USP17L23D6RBM5 183 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 UBE2L6O14933 153 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 BCE1O60756 84 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 CCKP06307 115 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 C9orf129Q5T035 196 aaKnown RBP3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 LYPD5Q6UWN5 251 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 FAM19A5Q7Z5A7 132 aaPredicted RBP3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 OR13C6PQ8NH95 151 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 DYNLRB2Q8TF09 96 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 C14orf132Q9NPU4 83 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 LINC00846Q9NV44 126 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 ORMDL1Q9P0S3 153 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 DOPEY2Q9Y3R5 2298 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 ATMQ13315 3056 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 GVINP1Q7Z2Y8 2422 aa3.27□□□□□ -1.89
SMARCC1-206ENST00000485737 LOC107984640A0A0U1RRK4 108 aa3.26□□□□□ -1.89
SMARCC1-206ENST00000485737 PLAC8L1A1L4L8 177 aa3.26□□□□□ -1.89
SMARCC1-206ENST00000485737 JMJD7-PLA2G4BH0Y9G9 81 aa3.26□□□□□ -1.89
SMARCC1-206ENST00000485737 LECT2O14960 151 aa3.26□□□□□ -1.89
SMARCC1-206ENST00000485737 DEFB136Q30KP8 78 aa3.26□□□□□ -1.89
SMARCC1-206ENST00000485737 Q6ZTI0 123 aa3.26□□□□□ -1.89
SMARCC1-206ENST00000485737 C18orf65Q6ZTR6 163 aa3.26□□□□□ -1.89
SMARCC1-206ENST00000485737 C16orf74Q96GX8 76 aa3.26□□□□□ -1.89
SMARCC1-206ENST00000485737 CYSTM1Q9H1C7 97 aa3.26□□□□□ -1.89
SMARCC1-206ENST00000485737 PTPRZ1P23471 2315 aaPredicted RBP3.26□□□□□ -1.89
SMARCC1-206ENST00000485737 LRBAP50851 2863 aa3.26□□□□□ -1.89
SMARCC1-206ENST00000485737 TTC28Q96AY4 2481 aa3.25□□□□□ -1.89
SMARCC1-206ENST00000485737 IGKV3D-7A0A0C4DH55 119 aa3.25□□□□□ -1.89
SMARCC1-206ENST00000485737 NCR3O14931 201 aa3.25□□□□□ -1.89
SMARCC1-206ENST00000485737 NDUFC2O95298 119 aa3.25□□□□□ -1.89
SMARCC1-206ENST00000485737 GNLYP22749 145 aa3.25□□□□□ -1.89
SMARCC1-206ENST00000485737 CMC4P56277 68 aaPredicted RBP3.25□□□□□ -1.89
SMARCC1-206ENST00000485737 LINC00158P58513 81 aa3.25□□□□□ -1.89
SMARCC1-206ENST00000485737 STHQ8IWL8 128 aa3.25□□□□□ -1.89
SMARCC1-206ENST00000485737 Q8IZM0 81 aa3.25□□□□□ -1.89
SMARCC1-206ENST00000485737 DPH3Q96FX2 82 aa3.25□□□□□ -1.89
SMARCC1-206ENST00000485737 XCL2Q9UBD3 114 aa3.25□□□□□ -1.89
SMARCC1-206ENST00000485737 CSMD1Q96PZ7 3565 aa3.24□□□□□ -1.89
SMARCC1-206ENST00000485737 A0A087WVE0 104 aa3.24□□□□□ -1.89
SMARCC1-206ENST00000485737 TRBV6-8A0A0A6YYG3 113 aa3.24□□□□□ -1.89
SMARCC1-206ENST00000485737 EPM2AB3EWF7 344 aa3.24□□□□□ -1.89
SMARCC1-206ENST00000485737 OXTP01178 125 aa3.24□□□□□ -1.89
SMARCC1-206ENST00000485737 GIG44P09565 113 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms