RNA–Protein interactions for RNA: ENST00000485454.1

SFPQ-209, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 339 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-209ENST00000485454 Q6AWC8 147 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 Q6ZUT4 128 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 SPRR2FQ96RM1 72 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 SEC11CQ9BY50 192 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 PBRM1Q86U86 1689 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 KNL1Q8NG31 2342 aa-1.23□□□□□ -2.61
SFPQ-209ENST00000485454 DOCK2Q92608 1830 aa-1.24□□□□□ -2.61
SFPQ-209ENST00000485454 DOCK1Q14185 1865 aa-1.24□□□□□ -2.61
SFPQ-209ENST00000485454 SYNJ1O43426 1573 aa-1.24□□□□□ -2.61
SFPQ-209ENST00000485454 DEFA5Q01523 94 aa-1.24□□□□□ -2.61
SFPQ-209ENST00000485454 TAC4Q86UU9 113 aa-1.24□□□□□ -2.61
SFPQ-209ENST00000485454 CDC26Q8NHZ8 85 aa-1.24□□□□□ -2.61
SFPQ-209ENST00000485454 USMG5Q96IX5 58 aa-1.24□□□□□ -2.61
SFPQ-209ENST00000485454 DNAH3Q8TD57 4116 aa-1.24□□□□□ -2.61
SFPQ-209ENST00000485454 DISP2A7MBM2 1401 aa-1.24□□□□□ -2.61
SFPQ-209ENST00000485454 ZNF518AQ6AHZ1 1483 aa-1.24□□□□□ -2.61
SFPQ-209ENST00000485454 TULP4Q9NRJ4 1543 aa-1.25□□□□□ -2.61
SFPQ-209ENST00000485454 RAPGEF6Q8TEU7 1601 aa-1.25□□□□□ -2.61
SFPQ-209ENST00000485454 DEFB112Q30KQ8 113 aa-1.25□□□□□ -2.61
SFPQ-209ENST00000485454 C10orf128Q5T292 105 aa-1.25□□□□□ -2.61
SFPQ-209ENST00000485454 ZZEF1O43149 2961 aa-1.25□□□□□ -2.61
SFPQ-209ENST00000485454 BOD1L1Q8NFC6 3051 aa-1.25□□□□□ -2.61
SFPQ-209ENST00000485454 MYOM3Q5VTT5 1437 aa-1.25□□□□□ -2.61
SFPQ-209ENST00000485454 SACSQ9NZJ4 4579 aa-1.25□□□□□ -2.61
SFPQ-209ENST00000485454 KIAA0556O60303 1618 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 DNAH1Q9P2D7 4330 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 ANK3Q12955 4377 aaKnown RBP-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 TRAV13-2A0A0B4J235 113 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 FAM236AA0A1B0GUQ0 79 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 FAM236BA0A1B0GV22 79 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 HCG22E2RYF7 251 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 F8VRH5 84 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 PITX3O75364 302 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 B2MP61769 119 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 S100A7L2Q5SY68 101 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 ARHGEF12Q9NZN5 1544 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 ZFHX4Q86UP3 3567 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 SETBP1Q9Y6X0 1596 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 PATJQ8NI35 1801 aa-1.26□□□□□ -2.61
SFPQ-209ENST00000485454 J3QR89 54 aa-1.27□□□□□ -2.61
SFPQ-209ENST00000485454 M0R129 80 aa-1.27□□□□□ -2.61
SFPQ-209ENST00000485454 FABP1P07148 127 aa-1.27□□□□□ -2.61
SFPQ-209ENST00000485454 TSPAN19P0C672 248 aa-1.27□□□□□ -2.61
SFPQ-209ENST00000485454 IGLC6P0CF74 106 aa-1.27□□□□□ -2.61
SFPQ-209ENST00000485454 SMIM15Q7Z3B0 74 aa-1.27□□□□□ -2.61
SFPQ-209ENST00000485454 PPIP5K1Q6PFW1 1433 aa-1.27□□□□□ -2.61
SFPQ-209ENST00000485454 RIMS1Q86UR5 1692 aaKnown RBP-1.28□□□□□ -2.61
SFPQ-209ENST00000485454 GUCA1AP43080 201 aaPredicted RBP-1.28□□□□□ -2.61
SFPQ-209ENST00000485454 C9orf62Q8N4C0 152 aa-1.28□□□□□ -2.61
SFPQ-209ENST00000485454 TTC9CQ8N5M4 171 aa-1.28□□□□□ -2.61
SFPQ-209ENST00000485454 NDUFA4L2Q9NRX3 87 aa-1.28□□□□□ -2.61
SFPQ-209ENST00000485454 LINC01558Q9Y6Z2 57 aa-1.28□□□□□ -2.61
SFPQ-209ENST00000485454 LRBAP50851 2863 aa-1.28□□□□□ -2.61
SFPQ-209ENST00000485454 DMXL1Q9Y485 3027 aa-1.29□□□□□ -2.62
SFPQ-209ENST00000485454 TMEM263Q8WUH6 116 aaKnown RBP-1.29□□□□□ -2.62
SFPQ-209ENST00000485454 GSKIPQ9P0R6 139 aa-1.29□□□□□ -2.62
SFPQ-209ENST00000485454 APLNQ9ULZ1 77 aa-1.29□□□□□ -2.62
SFPQ-209ENST00000485454 VPS13BQ7Z7G8 4022 aa-1.29□□□□□ -2.62
SFPQ-209ENST00000485454 LOC285095A0A1B0GVY8 99 aa-1.3□□□□□ -2.62
SFPQ-209ENST00000485454 ARPC5O15511 151 aa-1.3□□□□□ -2.62
SFPQ-209ENST00000485454 MT1AP04731 61 aa-1.3□□□□□ -2.62
SFPQ-209ENST00000485454 KCNRGQ8N5I3 272 aa-1.3□□□□□ -2.62
SFPQ-209ENST00000485454 MGST2Q99735 147 aa-1.3□□□□□ -2.62
SFPQ-209ENST00000485454 DYNLRB1Q9NP97 96 aa-1.3□□□□□ -2.62
SFPQ-209ENST00000485454 PRG4Q92954 1404 aaPredicted RBP-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 SPEF2Q9C093 1822 aa-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 VPS13DQ5THJ4 4388 aa-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 TRBV7-3A0A075B6L6 115 aa-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 IGLC7A0M8Q6 106 aa-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 CPSF4LA6NMK7 179 aaKnown RBP-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 MGPP08493 103 aa-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 NBEAP1P0C6P0 100 aa-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 S100A5P33763 92 aa-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 C12orf73Q69YU5 71 aa-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 Q8N8P6 123 aa-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 NAA60Q9H7X0 242 aa-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 CRYBG3Q68DQ2 2970 aa-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 AKAP9Q99996 3911 aa-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 MAGI1Q96QZ7 1491 aaPredicted RBP-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 DYNC1H1Q14204 4646 aaKnown RBP-1.31□□□□□ -2.62
SFPQ-209ENST00000485454 ARAP2Q8WZ64 1704 aa-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 ANKRD30AQ9BXX3 1397 aa-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 CSMD2Q7Z408 3487 aa-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 LINC00959A0A1B0GUT2 108 aa-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 SSSCA1O60232 199 aa-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 LINC00694P0DN24 101 aa-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 NEFHP12036 1026 aa-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 COL14A1Q05707 1796 aaKnown RBP-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 PAPPA2Q9BXP8 1791 aa-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 HTTP42858 3142 aa-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 CCDC141Q6ZP82 1450 aa-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 FMN2Q9NZ56 1722 aa-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 DNAH9Q9NYC9 4486 aa-1.32□□□□□ -2.62
SFPQ-209ENST00000485454 HMGXB3Q12766 1538 aa-1.33□□□□□ -2.62
SFPQ-209ENST00000485454 M0R2Z0 102 aa-1.33□□□□□ -2.62
SFPQ-209ENST00000485454 SFT2D2O95562 160 aa-1.33□□□□□ -2.62
SFPQ-209ENST00000485454 C10orf113Q5VZT2 155 aa-1.33□□□□□ -2.62
SFPQ-209ENST00000485454 ZFHX3Q15911 3703 aa-1.33□□□□□ -2.62
SFPQ-209ENST00000485454 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.34□□□□□ -2.62
SFPQ-209ENST00000485454 K7ERU9 68 aa-1.34□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms