RNA–Protein interactions for RNA: ENST00000485306.1

TRIM54-203, Transcript of tripartite motif containing 54, humanhuman

TSL 2

Gene TRIM54, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-203ENST00000485306 LEPROTL1O95214 131 aa10.97□□□□□ -0.65
TRIM54-203ENST00000485306 MIAQ16674 131 aa10.97□□□□□ -0.65
TRIM54-203ENST00000485306 LINC00269Q8N2A0 174 aa10.97□□□□□ -0.65
TRIM54-203ENST00000485306 HSPB8Q9UJY1 196 aa10.97□□□□□ -0.65
TRIM54-203ENST00000485306 LECT2O14960 151 aa10.96□□□□□ -0.65
TRIM54-203ENST00000485306 REG3AQ06141 175 aa10.96□□□□□ -0.65
TRIM54-203ENST00000485306 Q6ZUT4 128 aa10.96□□□□□ -0.65
TRIM54-203ENST00000485306 BAALCQ8WXS3 180 aa10.96□□□□□ -0.65
TRIM54-203ENST00000485306 FAM104AQ969W3 186 aa10.96□□□□□ -0.65
TRIM54-203ENST00000485306 VCX2Q9H322 139 aa10.96□□□□□ -0.65
TRIM54-203ENST00000485306 TRAV8-4A0A0B4J246 113 aa10.95□□□□□ -0.66
TRIM54-203ENST00000485306 WFDC2Q14508 124 aa10.95□□□□□ -0.66
TRIM54-203ENST00000485306 TEX43Q6ZNM6 134 aa10.95□□□□□ -0.66
TRIM54-203ENST00000485306 AMELXQ99217 191 aa10.95□□□□□ -0.66
TRIM54-203ENST00000485306 C2orf88Q9BSF0 95 aa10.95□□□□□ -0.66
TRIM54-203ENST00000485306 ENHOQ6UWT2 76 aa10.94□□□□□ -0.66
TRIM54-203ENST00000485306 LINC00528Q8N1L1 170 aa10.94□□□□□ -0.66
TRIM54-203ENST00000485306 IFI27L1Q96BM0 104 aa10.94□□□□□ -0.66
TRIM54-203ENST00000485306 OPRPNQ99935 248 aaPredicted RBP10.94□□□□□ -0.66
TRIM54-203ENST00000485306 C1orf43Q9BWL3 253 aa10.94□□□□□ -0.66
TRIM54-203ENST00000485306 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.93□□□□□ -0.66
TRIM54-203ENST00000485306 IFITM10A6NMD0 228 aa10.92□□□□□ -0.66
TRIM54-203ENST00000485306 FAM229AH3BQW9 127 aa10.92□□□□□ -0.66
TRIM54-203ENST00000485306 S100A2P29034 98 aa10.92□□□□□ -0.66
TRIM54-203ENST00000485306 PMVKQ15126 192 aa10.92□□□□□ -0.66
TRIM54-203ENST00000485306 SS18Q15532 418 aa10.92□□□□□ -0.66
TRIM54-203ENST00000485306 HIST3H2BBQ8N257 126 aa10.92□□□□□ -0.66
TRIM54-203ENST00000485306 LINC00959A0A1B0GUT2 108 aa10.91□□□□□ -0.66
TRIM54-203ENST00000485306 C5orf52A6NGY3 159 aa10.91□□□□□ -0.66
TRIM54-203ENST00000485306 SMR3BP02814 79 aaPredicted RBP10.91□□□□□ -0.66
TRIM54-203ENST00000485306 SNRPEP62304 92 aaKnown RBP10.91□□□□□ -0.66
TRIM54-203ENST00000485306 Q5VSD8 79 aa10.91□□□□□ -0.66
TRIM54-203ENST00000485306 TRAV12-1A0A0B4J245 112 aa10.9□□□□□ -0.66
TRIM54-203ENST00000485306 PRSS1P07477 247 aa10.9□□□□□ -0.66
TRIM54-203ENST00000485306 FABP4P15090 132 aa10.9□□□□□ -0.66
TRIM54-203ENST00000485306 SEC11AP67812 179 aa10.9□□□□□ -0.66
TRIM54-203ENST00000485306 C14orf177Q52M58 125 aa10.9□□□□□ -0.66
TRIM54-203ENST00000485306 RNASE13Q5GAN3 156 aaKnown RBP10.9□□□□□ -0.66
TRIM54-203ENST00000485306 CLPSL2Q6UWE3 100 aa10.9□□□□□ -0.66
TRIM54-203ENST00000485306 LINC00173Q6ZV60 143 aa10.9□□□□□ -0.66
TRIM54-203ENST00000485306 CST9LQ9H4G1 147 aa10.9□□□□□ -0.66
TRIM54-203ENST00000485306 TRAV13-1A0A0B4J241 112 aa10.89□□□□□ -0.67
TRIM54-203ENST00000485306 IGKV3OR2-268A0A0C4DH90 116 aa10.89□□□□□ -0.67
TRIM54-203ENST00000485306 INAFM2P0DMQ5 153 aa10.89□□□□□ -0.67
TRIM54-203ENST00000485306 MAP1LC3CQ9BXW4 147 aa10.89□□□□□ -0.67
TRIM54-203ENST00000485306 UBE2D1P51668 147 aa10.88□□□□□ -0.67
TRIM54-203ENST00000485306 HAMPP81172 84 aa10.88□□□□□ -0.67
TRIM54-203ENST00000485306 FAM19A3Q7Z5A8 133 aa10.88□□□□□ -0.67
TRIM54-203ENST00000485306 FAM30AQ9NZY2 134 aa10.88□□□□□ -0.67
TRIM54-203ENST00000485306 CHCHD10Q8WYQ3 142 aaPredicted RBP10.87□□□□□ -0.67
TRIM54-203ENST00000485306 TMA7Q9Y2S6 64 aaKnown RBP10.87□□□□□ -0.67
TRIM54-203ENST00000485306 CD164L2Q6UWJ8 174 aa10.86□□□□□ -0.67
TRIM54-203ENST00000485306 HIST1H2BLQ99880 126 aa10.86□□□□□ -0.67
TRIM54-203ENST00000485306 LINC00242Q5T6M2 205 aa10.85□□□□□ -0.67
TRIM54-203ENST00000485306 Q6ZSA8 131 aa10.85□□□□□ -0.67
TRIM54-203ENST00000485306 IGLV10-54A0A075B6I4 117 aa10.84□□□□□ -0.67
TRIM54-203ENST00000485306 SYS1-DBNDD2H3BUS1 97 aa10.84□□□□□ -0.67
TRIM54-203ENST00000485306 HERVK_113P63121 156 aa10.84□□□□□ -0.67
TRIM54-203ENST00000485306 ZC2HC1BQ5TFG8 222 aa10.84□□□□□ -0.67
TRIM54-203ENST00000485306 PET117Q6UWS5 81 aa10.84□□□□□ -0.67
TRIM54-203ENST00000485306 CHTOPQ9Y3Y2 248 aaKnown RBP10.84□□□□□ -0.67
TRIM54-203ENST00000485306 DNAH8Q96JB1 4490 aa10.84□□□□□ -0.67
TRIM54-203ENST00000485306 TINCRA0A1B0GVN0 87 aa10.83□□□□□ -0.68
TRIM54-203ENST00000485306 GAGE12HA6NDE8 117 aa10.83□□□□□ -0.68
TRIM54-203ENST00000485306 F8VRH5 84 aa10.83□□□□□ -0.68
TRIM54-203ENST00000485306 IGLC3P0DOY3 106 aa10.83□□□□□ -0.68
TRIM54-203ENST00000485306 XCL1P47992 114 aa10.83□□□□□ -0.68
TRIM54-203ENST00000485306 KRTAP26-1Q6PEX3 210 aa10.83□□□□□ -0.68
TRIM54-203ENST00000485306 GEMIN7Q9H840 131 aaKnown RBP10.83□□□□□ -0.68
TRIM54-203ENST00000485306 USP17L23D6RBM5 183 aa10.82□□□□□ -0.68
TRIM54-203ENST00000485306 FOXI1Q12951 378 aa10.82□□□□□ -0.68
TRIM54-203ENST00000485306 LINC01620Q4KN68 170 aa10.82□□□□□ -0.68
TRIM54-203ENST00000485306 IGHV3OR16-9A0A0B4J2B5 98 aa10.81□□□□□ -0.68
TRIM54-203ENST00000485306 A0A0J9YXV3 536 aa10.81□□□□□ -0.68
TRIM54-203ENST00000485306 C3orf79P0CE67 100 aa10.81□□□□□ -0.68
TRIM54-203ENST00000485306 AKR1D1P51857 326 aa10.81□□□□□ -0.68
TRIM54-203ENST00000485306 ODF1Q14990 250 aa10.81□□□□□ -0.68
TRIM54-203ENST00000485306 LINC01561Q8N1V8 128 aa10.81□□□□□ -0.68
TRIM54-203ENST00000485306 IGLV5-45A0A087WSX0 123 aa10.8□□□□□ -0.68
TRIM54-203ENST00000485306 C20orf202A1L168 122 aa10.8□□□□□ -0.68
TRIM54-203ENST00000485306 COX7A2LO14548 114 aa10.8□□□□□ -0.68
TRIM54-203ENST00000485306 PLA2G1BP04054 148 aaKnown RBP10.8□□□□□ -0.68
TRIM54-203ENST00000485306 KRTDAPP60985 99 aa10.8□□□□□ -0.68
TRIM54-203ENST00000485306 MRPL35Q9NZE8 188 aaKnown RBP10.8□□□□□ -0.68
TRIM54-203ENST00000485306 IGLV4-69A0A075B6H9 119 aa10.79□□□□□ -0.68
TRIM54-203ENST00000485306 H0Y8G0 127 aa10.79□□□□□ -0.68
TRIM54-203ENST00000485306 PLNP26678 52 aa10.79□□□□□ -0.68
TRIM54-203ENST00000485306 CFAP161Q6P656 301 aa10.79□□□□□ -0.68
TRIM54-203ENST00000485306 CHAC1Q9BUX1 264 aa10.79□□□□□ -0.68
TRIM54-203ENST00000485306 A0A087WZ39 114 aa10.78□□□□□ -0.68
TRIM54-203ENST00000485306 H3BRM9 83 aa10.78□□□□□ -0.68
TRIM54-203ENST00000485306 APOMO95445 188 aa10.78□□□□□ -0.68
TRIM54-203ENST00000485306 COX6A2Q02221 97 aa10.78□□□□□ -0.68
TRIM54-203ENST00000485306 LINC01545Q5VT33 79 aa10.78□□□□□ -0.68
TRIM54-203ENST00000485306 SRRM2Q9UQ35 2752 aaKnown RBP10.78□□□□□ -0.68
TRIM54-203ENST00000485306 DPM2O94777 84 aa10.77□□□□□ -0.69
TRIM54-203ENST00000485306 MALP21145 153 aa10.77□□□□□ -0.69
TRIM54-203ENST00000485306 LINC00469Q8N7U9 141 aa10.77□□□□□ -0.69
TRIM54-203ENST00000485306 FAT1Q14517 4588 aa10.76□□□□□ -0.69
TRIM54-203ENST00000485306 IGHV1-58A0A0C4DH39 117 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms