RNA–Protein interactions for RNA: ENST00000484454.1

TARBP1-208, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

TSL 2

Gene TARBP1, Length 426 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-208ENST00000484454 HECTD4Q9Y4D8 3996 aa-0.39□□□□□ -2.47
TARBP1-208ENST00000484454 SHROOM2Q13796 1616 aa-0.39□□□□□ -2.47
TARBP1-208ENST00000484454 CSPG4Q6UVK1 2322 aa-0.39□□□□□ -2.47
TARBP1-208ENST00000484454 LRP1BQ9NZR2 4599 aa-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 TCHHQ07283 1943 aa-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 BCL9LQ86UU0 1499 aa-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 KTN1Q86UP2 1357 aaKnown RBP-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 LAMA5O15230 3695 aa-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 CHKB-CPT1BH3BT56 60 aa-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 SFT2D2O95562 160 aa-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 TNFP01375 233 aa-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 SPRR2DP22532 72 aa-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 MT4P47944 62 aa-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 PIGYQ3MUY2 71 aa-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 GOLGA4Q13439 2230 aaKnown RBP-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 MAP1BP46821 2468 aaKnown RBP-0.4□□□□□ -2.47
TARBP1-208ENST00000484454 A2ML1A8K2U0 1454 aa-0.41□□□□□ -2.47
TARBP1-208ENST00000484454 ZFHX3Q15911 3703 aa-0.41□□□□□ -2.47
TARBP1-208ENST00000484454 LOC285095A0A1B0GVY8 99 aa-0.41□□□□□ -2.48
TARBP1-208ENST00000484454 C9orf153Q5TBE3 101 aa-0.41□□□□□ -2.48
TARBP1-208ENST00000484454 MYOZ3Q8TDC0 251 aa-0.41□□□□□ -2.48
TARBP1-208ENST00000484454 CUL7Q14999 1698 aa-0.42□□□□□ -2.48
TARBP1-208ENST00000484454 SNAPC5O75971 98 aa-0.42□□□□□ -2.48
TARBP1-208ENST00000484454 RPL13AP3Q6NVV1 102 aa-0.42□□□□□ -2.48
TARBP1-208ENST00000484454 SETD2Q9BYW2 2564 aaPredicted RBP-0.43□□□□□ -2.48
TARBP1-208ENST00000484454 KDM5AP29375 1690 aaKnown RBP-0.43□□□□□ -2.48
TARBP1-208ENST00000484454 MYOM1P52179 1685 aa-0.43□□□□□ -2.48
TARBP1-208ENST00000484454 ALMS1Q8TCU4 4167 aa-0.43□□□□□ -2.48
TARBP1-208ENST00000484454 SPTA1P02549 2419 aa-0.43□□□□□ -2.48
TARBP1-208ENST00000484454 FLGP20930 4061 aaPredicted RBP-0.43□□□□□ -2.48
TARBP1-208ENST00000484454 TSC2P49815 1807 aa-0.43□□□□□ -2.48
TARBP1-208ENST00000484454 BIRC6Q9NR09 4857 aa-0.43□□□□□ -2.48
TARBP1-208ENST00000484454 RYR2Q92736 4967 aa-0.44□□□□□ -2.48
TARBP1-208ENST00000484454 ARHGEF5Q12774 1597 aa-0.44□□□□□ -2.48
TARBP1-208ENST00000484454 NBPF19A0A087WUL8 3843 aa-0.44□□□□□ -2.48
TARBP1-208ENST00000484454 NALCNQ8IZF0 1738 aa-0.44□□□□□ -2.48
TARBP1-208ENST00000484454 STAB2Q8WWQ8 2551 aa-0.45□□□□□ -2.48
TARBP1-208ENST00000484454 FLNBO75369 2602 aaKnown RBP-0.45□□□□□ -2.48
TARBP1-208ENST00000484454 RAPGEF6Q8TEU7 1601 aa-0.45□□□□□ -2.48
TARBP1-208ENST00000484454 NSD3Q9BZ95 1437 aa-0.45□□□□□ -2.48
TARBP1-208ENST00000484454 SHANK2Q9UPX8 1470 aa-0.45□□□□□ -2.48
TARBP1-208ENST00000484454 UBE2L5PA0A1B0GUS4 154 aa-0.45□□□□□ -2.48
TARBP1-208ENST00000484454 A0A1B0GV90 55 aa-0.45□□□□□ -2.48
TARBP1-208ENST00000484454 UBE2L3P68036 154 aaKnown RBP-0.45□□□□□ -2.48
TARBP1-208ENST00000484454 NXT2Q9NPJ8 142 aaKnown RBP-0.45□□□□□ -2.48
TARBP1-208ENST00000484454 RNF213Q63HN8 5207 aa-0.45□□□□□ -2.48
TARBP1-208ENST00000484454 ARHGEF12Q9NZN5 1544 aa-0.45□□□□□ -2.48
TARBP1-208ENST00000484454 LAMA2P24043 3122 aaKnown RBP-0.45□□□□□ -2.48
TARBP1-208ENST00000484454 USP9YO00507 2555 aaPredicted RBP-0.46□□□□□ -2.48
TARBP1-208ENST00000484454 HECTD1Q9ULT8 2610 aa-0.46□□□□□ -2.48
TARBP1-208ENST00000484454 COL6A3P12111 3177 aa-0.46□□□□□ -2.48
TARBP1-208ENST00000484454 TGP01266 2768 aa-0.46□□□□□ -2.48
TARBP1-208ENST00000484454 MGPP08493 103 aa-0.46□□□□□ -2.48
TARBP1-208ENST00000484454 IGLC1P0CG04 106 aa-0.46□□□□□ -2.48
TARBP1-208ENST00000484454 DPH3P1Q9H4G8 78 aa-0.46□□□□□ -2.48
TARBP1-208ENST00000484454 CDC42SE2Q9NRR3 84 aa-0.46□□□□□ -2.48
TARBP1-208ENST00000484454 UQCR10Q9UDW1 63 aa-0.46□□□□□ -2.48
TARBP1-208ENST00000484454 MXRA5Q9NR99 2828 aa-0.46□□□□□ -2.48
TARBP1-208ENST00000484454 ACANP16112 2415 aa-0.47□□□□□ -2.48
TARBP1-208ENST00000484454 K7EQZ3 153 aa-0.47□□□□□ -2.48
TARBP1-208ENST00000484454 SPRR1BP22528 89 aa-0.47□□□□□ -2.48
TARBP1-208ENST00000484454 GNG11P61952 73 aa-0.47□□□□□ -2.48
TARBP1-208ENST00000484454 FAIMQ9NVQ4 179 aa-0.47□□□□□ -2.48
TARBP1-208ENST00000484454 ARL2-SNX15V9GYD0 113 aa-0.47□□□□□ -2.48
TARBP1-208ENST00000484454 WNK1Q9H4A3 2382 aa-0.47□□□□□ -2.49
TARBP1-208ENST00000484454 DNAH3Q8TD57 4116 aa-0.47□□□□□ -2.49
TARBP1-208ENST00000484454 SMG6Q86US8 1419 aaKnown RBP-0.47□□□□□ -2.49
TARBP1-208ENST00000484454 WDR7Q9Y4E6 1490 aa-0.48□□□□□ -2.49
TARBP1-208ENST00000484454 NIPBLQ6KC79 2804 aaeCLIP-0.48□□□□□ -2.49
TARBP1-208ENST00000484454 EP300Q09472 2414 aaPredicted RBP-0.48□□□□□ -2.49
TARBP1-208ENST00000484454 DLEU1O43261 78 aa-0.48□□□□□ -2.49
TARBP1-208ENST00000484454 COX6B1P14854 86 aa-0.48□□□□□ -2.49
TARBP1-208ENST00000484454 FAM223AQ8IWN6 122 aa-0.48□□□□□ -2.49
TARBP1-208ENST00000484454 TEP1Q99973 2627 aaKnown RBP-0.48□□□□□ -2.49
TARBP1-208ENST00000484454 DNAH6Q9C0G6 4158 aa-0.48□□□□□ -2.49
TARBP1-208ENST00000484454 POLA1P09884 1462 aaPredicted RBP-0.48□□□□□ -2.49
TARBP1-208ENST00000484454 MYOM2P54296 1465 aa-0.48□□□□□ -2.49
TARBP1-208ENST00000484454 DSPP15924 2871 aaKnown RBP-0.49□□□□□ -2.49
TARBP1-208ENST00000484454 PKHD1P08F94 4074 aa-0.49□□□□□ -2.49
TARBP1-208ENST00000484454 FAM24AA6NFZ4 105 aa-0.49□□□□□ -2.49
TARBP1-208ENST00000484454 C10orf113Q5VZT2 155 aa-0.49□□□□□ -2.49
TARBP1-208ENST00000484454 TMEM263Q8WUH6 116 aaKnown RBP-0.49□□□□□ -2.49
TARBP1-208ENST00000484454 SPRR4Q96PI1 79 aa-0.49□□□□□ -2.49
TARBP1-208ENST00000484454 TET3O43151 1660 aa-0.49□□□□□ -2.49
TARBP1-208ENST00000484454 ITPR3Q14573 2671 aa-0.5□□□□□ -2.49
TARBP1-208ENST00000484454 APC2O95996 2303 aa-0.5□□□□□ -2.49
TARBP1-208ENST00000484454 UBA52P62987 128 aaKnown RBP-0.5□□□□□ -2.49
TARBP1-208ENST00000484454 SFTA2Q6UW10 78 aa-0.5□□□□□ -2.49
TARBP1-208ENST00000484454 DEFB123Q8N688 67 aa-0.5□□□□□ -2.49
TARBP1-208ENST00000484454 MANBALQ9NQG1 85 aa-0.5□□□□□ -2.49
TARBP1-208ENST00000484454 HMGXB3Q12766 1538 aa-0.5□□□□□ -2.49
TARBP1-208ENST00000484454 EFCAB10A6NFE3 127 aa-0.51□□□□□ -2.49
TARBP1-208ENST00000484454 SONP18583 2426 aaKnown RBP-0.51□□□□□ -2.49
TARBP1-208ENST00000484454 ATP5EP56381 51 aaPredicted RBP-0.51□□□□□ -2.49
TARBP1-208ENST00000484454 EPG5Q9HCE0 2579 aa-0.51□□□□□ -2.49
TARBP1-208ENST00000484454 PRRC2CQ9Y520 2896 aaKnown RBP-0.51□□□□□ -2.49
TARBP1-208ENST00000484454 CHD8Q9HCK8 2581 aa-0.51□□□□□ -2.49
TARBP1-208ENST00000484454 FASNP49327 2511 aaKnown RBP-0.52□□□□□ -2.49
TARBP1-208ENST00000484454 PKHD1L1Q86WI1 4243 aa-0.52□□□□□ -2.49
TARBP1-208ENST00000484454 SCAPERQ9BY12 1400 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms