RNA–Protein interactions for RNA: ENST00000484330.5

ERCC8-206, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 3

Gene ERCC8, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-206ENST00000484330 PCNX1Q96RV3 2341 aa-0.33□□□□□ -2.46
ERCC8-206ENST00000484330 MAGI1Q96QZ7 1491 aaPredicted RBP-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 MYH7P12883 1935 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 VPS13DQ5THJ4 4388 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 HERC2O95714 4834 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 TRBV7-3A0A075B6L6 115 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 TRBV7-4A0A0J9YYF1 115 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 LOC285095A0A1B0GVY8 99 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 IGLC7A0M8Q6 106 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 HMGN4O00479 90 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 SFT2D2O95562 160 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 MGPP08493 103 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 HIST1H1DP16402 221 aaKnown RBP-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 SMG6Q86US8 1419 aaKnown RBP-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 FAT3Q8TDW7 4589 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 LSM10Q969L4 123 aaKnown RBP-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 PPP3R2Q96LZ3 170 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 SNRNP25Q9BV90 132 aaKnown RBP-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 QRICH2Q9H0J4 1663 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 DNAH2Q9P225 4427 aa-0.34□□□□□ -2.46
ERCC8-206ENST00000484330 DNAH3Q8TD57 4116 aa-0.35□□□□□ -2.46
ERCC8-206ENST00000484330 HIVEP1P15822 2718 aa-0.35□□□□□ -2.46
ERCC8-206ENST00000484330 A0A0G2JMZ2 1700 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 DIP2CQ9Y2E4 1556 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 SETBP1Q9Y6X0 1596 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 NAIPQ13075 1403 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 FOCADQ5VW36 1801 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 MRPL54Q6P161 138 aaKnown RBP-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 DEFB105AQ8NG35 78 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 TMEM263Q8WUH6 116 aaKnown RBP-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 NAA60Q9H7X0 242 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 FAIMQ9NVQ4 179 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 TET3O43151 1660 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 SCN7AQ01118 1682 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 DNAH9Q9NYC9 4486 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 HTTP42858 3142 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 NUP188Q5SRE5 1749 aa-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 XRN1Q8IZH2 1706 aaKnown RBP-0.35□□□□□ -2.47
ERCC8-206ENST00000484330 EHBP1L1Q8N3D4 1523 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 LINC00959A0A1B0GUT2 108 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 MIF4GDA9UHW6 222 aaKnown RBP-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 FAM25AB3EWG3 89 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 FAM25CB3EWG5 89 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 FAM25GB3EWG6 89 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 SYS1-DBNDD2H3BUS1 97 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 SSSCA1O60232 199 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 COX8AP10176 69 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 SPRR2EP22531 72 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 BTG2P78543 158 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 WHAMMP3Q1A5X7 153 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 KRTAP6-2Q3LI66 62 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 C10orf113Q5VZT2 155 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 ARL11Q969Q4 196 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 USMG5Q96IX5 58 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 SPANXDQ9BXN6 97 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 NXT2Q9NPJ8 142 aaKnown RBP-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 UQCR10Q9UDW1 63 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 FMN2Q9NZ56 1722 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 ITPR3Q14573 2671 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 CCDC141Q6ZP82 1450 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 MBD5Q9P267 1494 aa-0.36□□□□□ -2.47
ERCC8-206ENST00000484330 CUL7Q14999 1698 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 ROBO1Q9Y6N7 1651 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 TACC2O95359 2948 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 PAPPA2Q9BXP8 1791 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 EPG5Q9HCE0 2579 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 AKAP9Q99996 3911 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 HMGXB3Q12766 1538 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 IFNGP01579 166 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 APOC2P02655 101 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 IGLC1P0CG04 106 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 SELENOWP63302 87 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 KLK9Q2XQG4 91 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 Q56UQ5 140 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 MEIG1Q5JSS6 88 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 COMMD6Q7Z4G1 85 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 C5orf38Q86SI9 138 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 C8orf59Q8N0T1 100 aaPredicted RBP-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 MYOZ3Q8TDC0 251 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 TSLPQ969D9 159 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 FAM167A-AS1Q96KT0 104 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 SPRR4Q96PI1 79 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 LINC00470Q9BZP3 86 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 CDC42SE2Q9NRR3 84 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 USH2AO75445 5202 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 KTN1Q86UP2 1357 aaKnown RBP-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 A2ML1A8K2U0 1454 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 C1orf167Q5SNV9 1468 aa-0.37□□□□□ -2.47
ERCC8-206ENST00000484330 ANK3Q12955 4377 aaKnown RBP-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 MYO18BQ8IUG5 2567 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 TOP2BQ02880 1626 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 REV3LO60673 3130 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 CHKB-CPT1BH3BT56 60 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 FGF7P21781 194 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 ATP5EP56381 51 aaPredicted RBP-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 UBA52P62987 128 aaKnown RBP-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 CATR1Q13166 79 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 DEFB135Q30KP9 77 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 FAM223AQ8IWN6 122 aa-0.38□□□□□ -2.47
ERCC8-206ENST00000484330 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms