RNA–Protein interactions for RNA: ENST00000483981.2

SHANK1-208, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-208ENST00000483981 SCXQ7RTU7 201 aa7.87□□□□□ -1.15
SHANK1-208ENST00000483981 PRSS3P2Q8NHM4 247 aa7.87□□□□□ -1.15
SHANK1-208ENST00000483981 CIRBP-AS1Q8TBR5 109 aa7.87□□□□□ -1.15
SHANK1-208ENST00000483981 LINC00526Q96FQ7 95 aa7.87□□□□□ -1.15
SHANK1-208ENST00000483981 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.87□□□□□ -1.15
SHANK1-208ENST00000483981 IFITM10A6NMD0 228 aa7.86□□□□□ -1.15
SHANK1-208ENST00000483981 UBE2D1P51668 147 aa7.86□□□□□ -1.15
SHANK1-208ENST00000483981 COX6A2Q02221 97 aa7.86□□□□□ -1.15
SHANK1-208ENST00000483981 C5orf38Q86SI9 138 aa7.86□□□□□ -1.15
SHANK1-208ENST00000483981 CBLN2Q8IUK8 224 aa7.86□□□□□ -1.15
SHANK1-208ENST00000483981 C18orf32Q8TCD1 76 aa7.86□□□□□ -1.15
SHANK1-208ENST00000483981 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.85□□□□□ -1.15
SHANK1-208ENST00000483981 G0S2P27469 103 aa7.85□□□□□ -1.15
SHANK1-208ENST00000483981 FAM19A3Q7Z5A8 133 aa7.85□□□□□ -1.15
SHANK1-208ENST00000483981 TIMM17AQ99595 171 aa7.85□□□□□ -1.15
SHANK1-208ENST00000483981 IGHV3-64A0A075B6Q5 118 aa7.84□□□□□ -1.15
SHANK1-208ENST00000483981 A0A096LNJ9 63 aa7.84□□□□□ -1.15
SHANK1-208ENST00000483981 EPM2AB3EWF7 344 aa7.84□□□□□ -1.15
SHANK1-208ENST00000483981 TEX43Q6ZNM6 134 aa7.84□□□□□ -1.15
SHANK1-208ENST00000483981 ERASQ7Z444 233 aa7.84□□□□□ -1.15
SHANK1-208ENST00000483981 VCX2Q9H322 139 aa7.84□□□□□ -1.15
SHANK1-208ENST00000483981 SMCO4Q9NRQ5 59 aa7.84□□□□□ -1.15
SHANK1-208ENST00000483981 IGLV4-69A0A075B6H9 119 aa7.83□□□□□ -1.16
SHANK1-208ENST00000483981 A0A087WZ39 114 aa7.83□□□□□ -1.16
SHANK1-208ENST00000483981 Q5VSD8 79 aa7.83□□□□□ -1.16
SHANK1-208ENST00000483981 MALP21145 153 aa7.82□□□□□ -1.16
SHANK1-208ENST00000483981 Q6ZN92 141 aa7.82□□□□□ -1.16
SHANK1-208ENST00000483981 FA2HQ7L5A8 372 aa7.82□□□□□ -1.16
SHANK1-208ENST00000483981 C2orf48Q96LS8 159 aa7.82□□□□□ -1.16
SHANK1-208ENST00000483981 LINC01549A6NIU2 74 aa7.81□□□□□ -1.16
SHANK1-208ENST00000483981 ZNF561-AS1K7EIQ3 104 aa7.81□□□□□ -1.16
SHANK1-208ENST00000483981 APOMO95445 188 aa7.81□□□□□ -1.16
SHANK1-208ENST00000483981 LINC00614P0C842 121 aa7.81□□□□□ -1.16
SHANK1-208ENST00000483981 CHTF8P0CG12 524 aa7.81□□□□□ -1.16
SHANK1-208ENST00000483981 SYCNQ0VAF6 134 aa7.81□□□□□ -1.16
SHANK1-208ENST00000483981 KIAA0087Q14695 138 aa7.81□□□□□ -1.16
SHANK1-208ENST00000483981 OR10D4PQ8NGN7 298 aa7.81□□□□□ -1.16
SHANK1-208ENST00000483981 SPACA4Q8TDM5 124 aa7.81□□□□□ -1.16
SHANK1-208ENST00000483981 SCGB3A1Q96QR1 104 aa7.81□□□□□ -1.16
SHANK1-208ENST00000483981 C2orf88Q9BSF0 95 aa7.81□□□□□ -1.16
SHANK1-208ENST00000483981 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
SHANK1-208ENST00000483981 PAPPA-AS1Q5QFB9 102 aa7.8□□□□□ -1.16
SHANK1-208ENST00000483981 Q6ZRU5 148 aa7.8□□□□□ -1.16
SHANK1-208ENST00000483981 LINC00528Q8N1L1 170 aa7.8□□□□□ -1.16
SHANK1-208ENST00000483981 LINC01561Q8N1V8 128 aa7.8□□□□□ -1.16
SHANK1-208ENST00000483981 CARD19Q96LW7 228 aa7.8□□□□□ -1.16
SHANK1-208ENST00000483981 COLCA2A8K830 154 aa7.79□□□□□ -1.16
SHANK1-208ENST00000483981 FAM229AH3BQW9 127 aa7.79□□□□□ -1.16
SHANK1-208ENST00000483981 SPAG11BQ08648 103 aa7.79□□□□□ -1.16
SHANK1-208ENST00000483981 ORAOV1Q8WV07 137 aa7.79□□□□□ -1.16
SHANK1-208ENST00000483981 SRRM2Q9UQ35 2752 aaKnown RBP7.79□□□□□ -1.16
SHANK1-208ENST00000483981 A0A087WYN8 130 aa7.78□□□□□ -1.16
SHANK1-208ENST00000483981 A0A096LNI7 61 aa7.78□□□□□ -1.16
SHANK1-208ENST00000483981 PDZD11Q5EBL8 140 aa7.78□□□□□ -1.16
SHANK1-208ENST00000483981 CAMK2N2Q96S95 79 aa7.78□□□□□ -1.16
SHANK1-208ENST00000483981 CST9LQ9H4G1 147 aa7.78□□□□□ -1.16
SHANK1-208ENST00000483981 PLAC8Q9NZF1 115 aa7.78□□□□□ -1.16
SHANK1-208ENST00000483981 VPS13BQ7Z7G8 4022 aa7.77□□□□□ -1.17
SHANK1-208ENST00000483981 A0A0J9YXV3 536 aa7.77□□□□□ -1.17
SHANK1-208ENST00000483981 F8WDY8 70 aa7.77□□□□□ -1.17
SHANK1-208ENST00000483981 TRGC2P03986 189 aa7.77□□□□□ -1.17
SHANK1-208ENST00000483981 PMCHL1Q16048 86 aa7.77□□□□□ -1.17
SHANK1-208ENST00000483981 RNF151Q2KHN1 245 aa7.77□□□□□ -1.17
SHANK1-208ENST00000483981 C10orf25Q5T742 122 aa7.77□□□□□ -1.17
SHANK1-208ENST00000483981 MRPL35Q9NZE8 188 aaKnown RBP7.77□□□□□ -1.17
SHANK1-208ENST00000483981 CDKN2A-AS1Q9UH64 79 aa7.77□□□□□ -1.17
SHANK1-208ENST00000483981 IGLV5-45A0A087WSX0 123 aa7.76□□□□□ -1.17
SHANK1-208ENST00000483981 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.76□□□□□ -1.17
SHANK1-208ENST00000483981 HBDP02042 147 aa7.76□□□□□ -1.17
SHANK1-208ENST00000483981 RAB5BP61020 215 aa7.76□□□□□ -1.17
SHANK1-208ENST00000483981 HERVK_113P63121 156 aa7.76□□□□□ -1.17
SHANK1-208ENST00000483981 SEC11AP67812 179 aa7.76□□□□□ -1.17
SHANK1-208ENST00000483981 PMVKQ15126 192 aa7.76□□□□□ -1.17
SHANK1-208ENST00000483981 TINCRA0A1B0GVN0 87 aa7.75□□□□□ -1.17
SHANK1-208ENST00000483981 UNQ6190/PRO20217Q6UXQ8 127 aa7.75□□□□□ -1.17
SHANK1-208ENST00000483981 CHCHD1Q96BP2 118 aaKnown RBP7.75□□□□□ -1.17
SHANK1-208ENST00000483981 IGKV2-24A0A0C4DH68 120 aa7.74□□□□□ -1.17
SHANK1-208ENST00000483981 PLA2G1BP04054 148 aaKnown RBP7.74□□□□□ -1.17
SHANK1-208ENST00000483981 INAFM2P0DMQ5 153 aa7.74□□□□□ -1.17
SHANK1-208ENST00000483981 PTTG1IPP53801 180 aa7.74□□□□□ -1.17
SHANK1-208ENST00000483981 LINC00310P59036 64 aa7.74□□□□□ -1.17
SHANK1-208ENST00000483981 MAJINQ3KP22 176 aa7.74□□□□□ -1.17
SHANK1-208ENST00000483981 C6orf48Q9UBA6 75 aa7.74□□□□□ -1.17
SHANK1-208ENST00000483981 LOC107984640A0A0U1RRK4 108 aa7.73□□□□□ -1.17
SHANK1-208ENST00000483981 NDUFA1O15239 70 aa7.73□□□□□ -1.17
SHANK1-208ENST00000483981 SCO1O75880 301 aa7.73□□□□□ -1.17
SHANK1-208ENST00000483981 TLX1NBP0CAT3 122 aa7.73□□□□□ -1.17
SHANK1-208ENST00000483981 C2orf82Q6UX34 121 aa7.73□□□□□ -1.17
SHANK1-208ENST00000483981 GEMIN7Q9H840 131 aaKnown RBP7.73□□□□□ -1.17
SHANK1-208ENST00000483981 LINC00474Q9P2X8 69 aa7.73□□□□□ -1.17
SHANK1-208ENST00000483981 SMIM1B2RUZ4 78 aa7.72□□□□□ -1.17
SHANK1-208ENST00000483981 IGLC3P0DOY3 106 aa7.72□□□□□ -1.17
SHANK1-208ENST00000483981 Q8IZM0 81 aa7.72□□□□□ -1.17
SHANK1-208ENST00000483981 STPG4Q8N801 248 aa7.72□□□□□ -1.17
SHANK1-208ENST00000483981 DPH3Q96FX2 82 aa7.72□□□□□ -1.17
SHANK1-208ENST00000483981 PKIGQ9Y2B9 76 aa7.72□□□□□ -1.17
SHANK1-208ENST00000483981 ATP5LO75964 103 aa7.71□□□□□ -1.18
SHANK1-208ENST00000483981 GAGE2BQ13066 116 aa7.71□□□□□ -1.18
SHANK1-208ENST00000483981 TRBV30A0A0K0K1B3 111 aa7.7□□□□□ -1.18
SHANK1-208ENST00000483981 A0A1W2PNN7 141 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms