RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 LINC00269Q8N2A0 174 aa9.51□□□□□ -0.89
SMAD9-204ENST00000483941 VAMP8Q9BV40 100 aa9.51□□□□□ -0.89
SMAD9-204ENST00000483941 IGHV3-30P01768 117 aa9.5□□□□□ -0.89
SMAD9-204ENST00000483941 IGHV3-33P01772 117 aa9.5□□□□□ -0.89
SMAD9-204ENST00000483941 IGHV3-30-3P0DP02 117 aa9.5□□□□□ -0.89
SMAD9-204ENST00000483941 IGHV3-30-5P0DP03 117 aa9.5□□□□□ -0.89
SMAD9-204ENST00000483941 MIAQ16674 131 aa9.5□□□□□ -0.89
SMAD9-204ENST00000483941 PMCHL2Q9BQD1 86 aa9.5□□□□□ -0.89
SMAD9-204ENST00000483941 CHAC1Q9BUX1 264 aa9.5□□□□□ -0.89
SMAD9-204ENST00000483941 Q9H8V8 135 aa9.5□□□□□ -0.89
SMAD9-204ENST00000483941 PRR34Q9NV39 138 aa9.5□□□□□ -0.89
SMAD9-204ENST00000483941 KLK12Q9UKR0 248 aa9.5□□□□□ -0.89
SMAD9-204ENST00000483941 IGLV4-69A0A075B6H9 119 aa9.49□□□□□ -0.89
SMAD9-204ENST00000483941 A0A0J9YXV3 536 aa9.49□□□□□ -0.89
SMAD9-204ENST00000483941 LINC00959A0A1B0GUT2 108 aa9.49□□□□□ -0.89
SMAD9-204ENST00000483941 C11orf86A6NJI1 115 aa9.49□□□□□ -0.89
SMAD9-204ENST00000483941 TMEM170BQ5T4T1 132 aa9.49□□□□□ -0.89
SMAD9-204ENST00000483941 ZC2HC1BQ5TFG8 222 aa9.49□□□□□ -0.89
SMAD9-204ENST00000483941 C12orf57Q99622 126 aa9.49□□□□□ -0.89
SMAD9-204ENST00000483941 TRAV8-3A0A0A6YYJ7 113 aa9.48□□□□□ -0.89
SMAD9-204ENST00000483941 IGKV3OR2-268A0A0C4DH90 116 aa9.48□□□□□ -0.89
SMAD9-204ENST00000483941 LINC00242Q5T6M2 205 aa9.48□□□□□ -0.89
SMAD9-204ENST00000483941 LINC00518Q8N0U6 118 aa9.48□□□□□ -0.89
SMAD9-204ENST00000483941 RMI2Q96E14 147 aa9.48□□□□□ -0.89
SMAD9-204ENST00000483941 DNAH17Q9UFH2 4485 aa9.48□□□□□ -0.89
SMAD9-204ENST00000483941 TTC32Q5I0X7 151 aa9.47□□□□□ -0.89
SMAD9-204ENST00000483941 ATOH7Q8N100 152 aa9.47□□□□□ -0.89
SMAD9-204ENST00000483941 LINC00469Q8N7U9 141 aa9.47□□□□□ -0.89
SMAD9-204ENST00000483941 UBE2WQ96B02 151 aa9.47□□□□□ -0.89
SMAD9-204ENST00000483941 IGLV5-45A0A087WSX0 123 aa9.46□□□□□ -0.9
SMAD9-204ENST00000483941 CD164L2Q6UWJ8 174 aa9.46□□□□□ -0.9
SMAD9-204ENST00000483941 LINC01561Q8N1V8 128 aa9.46□□□□□ -0.9
SMAD9-204ENST00000483941 DNAH11Q96DT5 4516 aa9.46□□□□□ -0.9
SMAD9-204ENST00000483941 IBA57-AS1B1ANH7 110 aa9.45□□□□□ -0.9
SMAD9-204ENST00000483941 CHCHD10Q8WYQ3 142 aaPredicted RBP9.45□□□□□ -0.9
SMAD9-204ENST00000483941 COX11Q9Y6N1 276 aa9.45□□□□□ -0.9
SMAD9-204ENST00000483941 ZNF22P17026 224 aaPredicted RBP9.44□□□□□ -0.9
SMAD9-204ENST00000483941 SPATA45Q537H7 98 aa9.44□□□□□ -0.9
SMAD9-204ENST00000483941 CLPSL2Q6UWE3 100 aa9.44□□□□□ -0.9
SMAD9-204ENST00000483941 ENHOQ6UWT2 76 aa9.44□□□□□ -0.9
SMAD9-204ENST00000483941 C1orf43Q9BWL3 253 aa9.44□□□□□ -0.9
SMAD9-204ENST00000483941 PAM16Q9Y3D7 125 aa9.44□□□□□ -0.9
SMAD9-204ENST00000483941 E9PLD3 99 aa9.43□□□□□ -0.9
SMAD9-204ENST00000483941 XCL1P47992 114 aa9.43□□□□□ -0.9
SMAD9-204ENST00000483941 Q8N3U1 123 aa9.43□□□□□ -0.9
SMAD9-204ENST00000483941 STPG4Q8N801 248 aa9.43□□□□□ -0.9
SMAD9-204ENST00000483941 PLEKHB2Q96CS7 222 aa9.43□□□□□ -0.9
SMAD9-204ENST00000483941 CDKN2A-AS1Q9UH64 79 aa9.43□□□□□ -0.9
SMAD9-204ENST00000483941 PKD1P98161 4303 aa9.42□□□□□ -0.9
SMAD9-204ENST00000483941 A0A087WZ39 114 aa9.42□□□□□ -0.9
SMAD9-204ENST00000483941 IGHV3OR16-9A0A0B4J2B5 98 aa9.42□□□□□ -0.9
SMAD9-204ENST00000483941 hDV102S1A0JD36 115 aa9.42□□□□□ -0.9
SMAD9-204ENST00000483941 TMEM223A0PJW6 202 aa9.42□□□□□ -0.9
SMAD9-204ENST00000483941 COX7A2LO14548 114 aa9.42□□□□□ -0.9
SMAD9-204ENST00000483941 APOMO95445 188 aa9.42□□□□□ -0.9
SMAD9-204ENST00000483941 TM2D2Q9BX73 214 aa9.42□□□□□ -0.9
SMAD9-204ENST00000483941 IGHV1-58A0A0C4DH39 117 aa9.41□□□□□ -0.9
SMAD9-204ENST00000483941 TSTD3H0UI37 97 aa9.41□□□□□ -0.9
SMAD9-204ENST00000483941 MALP21145 153 aa9.41□□□□□ -0.9
SMAD9-204ENST00000483941 COX6A2Q02221 97 aa9.41□□□□□ -0.9
SMAD9-204ENST00000483941 LEPROTO15243 131 aa9.4□□□□□ -0.9
SMAD9-204ENST00000483941 SFTA2Q6UW10 78 aa9.4□□□□□ -0.9
SMAD9-204ENST00000483941 HSPG2P98160 4391 aa9.39□□□□□ -0.91
SMAD9-204ENST00000483941 IGLV10-54A0A075B6I4 117 aa9.39□□□□□ -0.91
SMAD9-204ENST00000483941 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
SMAD9-204ENST00000483941 LGALS3P17931 250 aaKnown RBP9.39□□□□□ -0.91
SMAD9-204ENST00000483941 NMUP48645 174 aa9.39□□□□□ -0.91
SMAD9-204ENST00000483941 CFAP161Q6P656 301 aa9.39□□□□□ -0.91
SMAD9-204ENST00000483941 IGKV2D-24A0A075B6R9 120 aa9.38□□□□□ -0.91
SMAD9-204ENST00000483941 NBDYA0A0U1RRE5 68 aa9.38□□□□□ -0.91
SMAD9-204ENST00000483941 MAJINQ3KP22 176 aa9.38□□□□□ -0.91
SMAD9-204ENST00000483941 ANKRD39Q53RE8 183 aa9.38□□□□□ -0.91
SMAD9-204ENST00000483941 CDPF1Q6NVV7 123 aa9.38□□□□□ -0.91
SMAD9-204ENST00000483941 IGLV5-39A0A0G2JS06 123 aa9.37□□□□□ -0.91
SMAD9-204ENST00000483941 J3QQQ9 107 aa9.37□□□□□ -0.91
SMAD9-204ENST00000483941 DLEU1O43261 78 aa9.37□□□□□ -0.91
SMAD9-204ENST00000483941 PRSS2P07478 247 aa9.37□□□□□ -0.91
SMAD9-204ENST00000483941 SPINK8P0C7L1 97 aa9.37□□□□□ -0.91
SMAD9-204ENST00000483941 COX8AP10176 69 aa9.37□□□□□ -0.91
SMAD9-204ENST00000483941 FOXI1Q12951 378 aa9.37□□□□□ -0.91
SMAD9-204ENST00000483941 C5orf38Q86SI9 138 aa9.37□□□□□ -0.91
SMAD9-204ENST00000483941 Q9HAA7 133 aa9.37□□□□□ -0.91
SMAD9-204ENST00000483941 UQCR10Q9UDW1 63 aa9.37□□□□□ -0.91
SMAD9-204ENST00000483941 SMIM1B2RUZ4 78 aa9.36□□□□□ -0.91
SMAD9-204ENST00000483941 SLC25A34Q6PIV7 304 aa9.36□□□□□ -0.91
SMAD9-204ENST00000483941 IGHV3-64A0A075B6Q5 118 aa9.34□□□□□ -0.91
SMAD9-204ENST00000483941 MYMXA0A1B0GTQ4 84 aa9.34□□□□□ -0.91
SMAD9-204ENST00000483941 CXCL5P42830 114 aa9.34□□□□□ -0.91
SMAD9-204ENST00000483941 C6orf226Q5I0X4 101 aa9.34□□□□□ -0.91
SMAD9-204ENST00000483941 Q8IZM0 81 aa9.34□□□□□ -0.91
SMAD9-204ENST00000483941 COX7B2Q8TF08 81 aa9.34□□□□□ -0.91
SMAD9-204ENST00000483941 LINC00587B1AMM8 73 aa9.33□□□□□ -0.92
SMAD9-204ENST00000483941 F8WDY8 70 aa9.33□□□□□ -0.92
SMAD9-204ENST00000483941 HERV-K104P63124 156 aa9.33□□□□□ -0.92
SMAD9-204ENST00000483941 BOD1L2Q8IYS8 172 aa9.33□□□□□ -0.92
SMAD9-204ENST00000483941 C14orf144Q96I85 54 aa9.33□□□□□ -0.92
SMAD9-204ENST00000483941 MIEN1Q9BRT3 115 aa9.33□□□□□ -0.92
SMAD9-204ENST00000483941 IGKV2D-26A0A0A0MRZ7 120 aa9.32□□□□□ -0.92
SMAD9-204ENST00000483941 ZNF815PA8K554 130 aa9.32□□□□□ -0.92
SMAD9-204ENST00000483941 PSCAO43653 123 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms