RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 LINC00846Q9NV44 126 aa1.72□□□□□ -2.13
PTCD3-214ENST00000483925 DLG5Q8TDM6 1919 aa1.72□□□□□ -2.13
PTCD3-214ENST00000483925 SDK1Q7Z5N4 2213 aa1.71□□□□□ -2.14
PTCD3-214ENST00000483925 PIN1P1O15428 100 aa1.71□□□□□ -2.14
PTCD3-214ENST00000483925 KRTAP12-4P60329 112 aa1.71□□□□□ -2.14
PTCD3-214ENST00000483925 WFDC2Q14508 124 aa1.71□□□□□ -2.14
PTCD3-214ENST00000483925 RGPD3A6NKT7 1758 aaPredicted RBP1.71□□□□□ -2.14
PTCD3-214ENST00000483925 SUPT6HQ7KZ85 1726 aaKnown RBP1.71□□□□□ -2.14
PTCD3-214ENST00000483925 SCN7AQ01118 1682 aa1.71□□□□□ -2.14
PTCD3-214ENST00000483925 SPTBP11277 2137 aa1.7□□□□□ -2.14
PTCD3-214ENST00000483925 RAPGEF6Q8TEU7 1601 aa1.7□□□□□ -2.14
PTCD3-214ENST00000483925 PRB1P04280 392 aa1.7□□□□□ -2.14
PTCD3-214ENST00000483925 KRTAP21-3Q3LHN1 58 aa1.7□□□□□ -2.14
PTCD3-214ENST00000483925 KCPQ6ZWJ8 1503 aa1.7□□□□□ -2.14
PTCD3-214ENST00000483925 DIP2BQ9P265 1576 aa1.69□□□□□ -2.14
PTCD3-214ENST00000483925 WNK3Q9BYP7 1800 aa1.69□□□□□ -2.14
PTCD3-214ENST00000483925 K7EIL1 84 aa1.69□□□□□ -2.14
PTCD3-214ENST00000483925 LEPROTL1O95214 131 aa1.69□□□□□ -2.14
PTCD3-214ENST00000483925 SPINT3P49223 89 aa1.69□□□□□ -2.14
PTCD3-214ENST00000483925 TMEM263Q8WUH6 116 aaKnown RBP1.69□□□□□ -2.14
PTCD3-214ENST00000483925 PSENENQ9NZ42 101 aa1.69□□□□□ -2.14
PTCD3-214ENST00000483925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.69□□□□□ -2.148e-6■□□□□ 8.1
PTCD3-214ENST00000483925 LRRC37A2A6NM11 1700 aa1.69□□□□□ -2.14
PTCD3-214ENST00000483925 ANKARQ7Z5J8 1434 aa1.68□□□□□ -2.14
PTCD3-214ENST00000483925 CUX1P39880 1505 aa1.68□□□□□ -2.14
PTCD3-214ENST00000483925 A0A087WVE0 104 aa1.68□□□□□ -2.14
PTCD3-214ENST00000483925 D6R8Y8 96 aa1.68□□□□□ -2.14
PTCD3-214ENST00000483925 KRTAP12-3P60328 96 aa1.68□□□□□ -2.14
PTCD3-214ENST00000483925 BVES-AS1Q5T3Y7 98 aa1.68□□□□□ -2.14
PTCD3-214ENST00000483925 Q6ZSA8 131 aa1.68□□□□□ -2.14
PTCD3-214ENST00000483925 MUSTN1Q8IVN3 82 aa1.68□□□□□ -2.14
PTCD3-214ENST00000483925 LINC00472Q9H8W2 130 aa1.68□□□□□ -2.14
PTCD3-214ENST00000483925 MAP2P11137 1827 aaKnown RBP1.68□□□□□ -2.14
PTCD3-214ENST00000483925 ABCC1P33527 1531 aa1.67□□□□□ -2.14
PTCD3-214ENST00000483925 MYMXA0A1B0GTQ4 84 aa1.67□□□□□ -2.14
PTCD3-214ENST00000483925 IGLC2P0DOY2 106 aa1.67□□□□□ -2.14
PTCD3-214ENST00000483925 IGLC3P0DOY3 106 aa1.67□□□□□ -2.14
PTCD3-214ENST00000483925 PROK2Q9HC23 129 aa1.67□□□□□ -2.14
PTCD3-214ENST00000483925 LRRC9Q6ZRR7 1453 aa1.67□□□□□ -2.14
PTCD3-214ENST00000483925 NEXMIFQ5QGS0 1516 aa1.66□□□□□ -2.14
PTCD3-214ENST00000483925 IQCF6A8MYZ5 107 aa1.66□□□□□ -2.14
PTCD3-214ENST00000483925 G3V318 75 aa1.66□□□□□ -2.14
PTCD3-214ENST00000483925 SMCO4Q9NRQ5 59 aa1.66□□□□□ -2.14
PTCD3-214ENST00000483925 CCDC88BA6NC98 1476 aa1.66□□□□□ -2.14
PTCD3-214ENST00000483925 DOCK11Q5JSL3 2073 aa1.65□□□□□ -2.14
PTCD3-214ENST00000483925 SSC5DA1L4H1 1573 aa1.65□□□□□ -2.15
PTCD3-214ENST00000483925 CFAP74Q9C0B2 1584 aa1.65□□□□□ -2.15
PTCD3-214ENST00000483925 H3BUT2 72 aa1.65□□□□□ -2.15
PTCD3-214ENST00000483925 PLGLAQ15195 96 aa1.65□□□□□ -2.15
PTCD3-214ENST00000483925 Q6JHZ5 121 aa1.65□□□□□ -2.15
PTCD3-214ENST00000483925 ASCC3Q8N3C0 2202 aaKnown RBP1.64□□□□□ -2.15
PTCD3-214ENST00000483925 NCOA2Q15596 1464 aa1.64□□□□□ -2.15
PTCD3-214ENST00000483925 CCDC141Q6ZP82 1450 aa1.64□□□□□ -2.15
PTCD3-214ENST00000483925 BTAF1O14981 1849 aa1.64□□□□□ -2.15
PTCD3-214ENST00000483925 TECTAO75443 2155 aa1.64□□□□□ -2.15
PTCD3-214ENST00000483925 ARL14EPLP0DKL9 152 aa1.64□□□□□ -2.15
PTCD3-214ENST00000483925 C10orf113Q5VZT2 155 aa1.64□□□□□ -2.15
PTCD3-214ENST00000483925 FDCSPQ8NFU4 85 aa1.64□□□□□ -2.15
PTCD3-214ENST00000483925 PDCD11Q14690 1871 aaKnown RBP1.63□□□□□ -2.15
PTCD3-214ENST00000483925 PTPN23Q9H3S7 1636 aa1.63□□□□□ -2.15
PTCD3-214ENST00000483925 CEBPZOSA8MTT3 80 aa1.63□□□□□ -2.15
PTCD3-214ENST00000483925 H0Y9P7 68 aa1.63□□□□□ -2.15
PTCD3-214ENST00000483925 HAMPP81172 84 aa1.63□□□□□ -2.15
PTCD3-214ENST00000483925 NUP188Q5SRE5 1749 aa1.63□□□□□ -2.15
PTCD3-214ENST00000483925 UBR1Q8IWV7 1749 aa1.63□□□□□ -2.15
PTCD3-214ENST00000483925 ZNF236Q9UL36 1845 aa1.62□□□□□ -2.15
PTCD3-214ENST00000483925 TRBV6-1A0A0K0K1D8 114 aa1.62□□□□□ -2.15
PTCD3-214ENST00000483925 PDCD5O14737 125 aa1.62□□□□□ -2.15
PTCD3-214ENST00000483925 GNGT1P63211 74 aa1.62□□□□□ -2.15
PTCD3-214ENST00000483925 DEFB107AQ8IZN7 70 aa1.62□□□□□ -2.15
PTCD3-214ENST00000483925 UBE2D4Q9Y2X8 147 aa1.62□□□□□ -2.15
PTCD3-214ENST00000483925 C1orf167Q5SNV9 1468 aa1.62□□□□□ -2.15
PTCD3-214ENST00000483925 FLG2Q5D862 2391 aaPredicted RBP1.61□□□□□ -2.15
PTCD3-214ENST00000483925 S100A3P33764 101 aa1.61□□□□□ -2.15
PTCD3-214ENST00000483925 SPINK9Q5DT21 86 aa1.61□□□□□ -2.15
PTCD3-214ENST00000483925 SPATA8Q6RVD6 105 aa1.61□□□□□ -2.15
PTCD3-214ENST00000483925 UBE2DNLQ8IWF7 75 aa1.61□□□□□ -2.15
PTCD3-214ENST00000483925 C18orf32Q8TCD1 76 aa1.61□□□□□ -2.15
PTCD3-214ENST00000483925 ZFHX3Q15911 3703 aa1.61□□□□□ -2.15
PTCD3-214ENST00000483925 ERICH3Q5RHP9 1530 aa1.61□□□□□ -2.15
PTCD3-214ENST00000483925 DEFA5Q01523 94 aa1.6□□□□□ -2.15
PTCD3-214ENST00000483925 PLAC8Q9NZF1 115 aa1.6□□□□□ -2.15
PTCD3-214ENST00000483925 DNMBPQ6XZF7 1577 aa1.59□□□□□ -2.15
PTCD3-214ENST00000483925 SMIM31A0A1B0GVY4 71 aa1.59□□□□□ -2.15
PTCD3-214ENST00000483925 CFDP00746 253 aaPredicted RBP1.59□□□□□ -2.15
PTCD3-214ENST00000483925 ABCA8O94911 1581 aa1.59□□□□□ -2.16
PTCD3-214ENST00000483925 NCOA6Q14686 2063 aaPredicted RBP1.59□□□□□ -2.16
PTCD3-214ENST00000483925 MED13LQ71F56 2210 aa1.58□□□□□ -2.16
PTCD3-214ENST00000483925 CNTRLQ7Z7A1 2325 aa1.57□□□□□ -2.16
PTCD3-214ENST00000483925 DEFB121Q5J5C9 76 aa1.57□□□□□ -2.16
PTCD3-214ENST00000483925 SHPRHQ149N8 1683 aa1.57□□□□□ -2.16
PTCD3-214ENST00000483925 KNDC1Q76NI1 1749 aa1.57□□□□□ -2.16
PTCD3-214ENST00000483925 ATP7BP35670 1465 aa1.56□□□□□ -2.16
PTCD3-214ENST00000483925 TMEM131LA2VDJ0 1609 aa1.56□□□□□ -2.16
PTCD3-214ENST00000483925 FBN1P35555 2871 aaKnown RBP1.56□□□□□ -2.16
PTCD3-214ENST00000483925 A0A1B0GUT8 65 aa1.56□□□□□ -2.16
PTCD3-214ENST00000483925 SMIM13P0DJ93 91 aa1.56□□□□□ -2.16
PTCD3-214ENST00000483925 ATP5EP2Q5VTU8 51 aa1.56□□□□□ -2.16
PTCD3-214ENST00000483925 C6orf201Q7Z4U5 140 aa1.56□□□□□ -2.16
PTCD3-214ENST00000483925 LRRIQ1Q96JM4 1722 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms