RNA–Protein interactions for RNA: ENST00000482785.1

SHQ1-208, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 3

Gene SHQ1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-208ENST00000482785 MEIS3P1A6NDR6 274 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 NAP1L6A6NFF2 107 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 CYB5BO43169 146 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 PMP2P02689 132 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 PRH1P02810 166 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 AKAIN1P0CW23 69 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 TRAPPC2P0DI81 140 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 TRAPPC2BP0DI82 140 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 DEFA4P12838 97 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 HRES1P13985 223 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 S100A4P26447 101 aaKnown RBP1.98□□□□□ -2.09
SHQ1-208ENST00000482785 FAUP35544 74 aaKnown RBP1.98□□□□□ -2.09
SHQ1-208ENST00000482785 ZNF80P51504 273 aaPredicted RBP1.98□□□□□ -2.09
SHQ1-208ENST00000482785 S100A12P80511 92 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 CATR1Q13166 79 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 ZNF846Q147U1 533 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 TMEM128Q5BJH2 165 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 RNASE10Q5GAN6 216 aaKnown RBP1.98□□□□□ -2.09
SHQ1-208ENST00000482785 C10orf55Q5SWW7 151 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 PRR9Q5T870 116 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 IDO2Q6ZQW0 420 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 ZNF818PQ6ZRF7 136 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 LCA10Q71F78 164 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 EXOC3-AS1Q8N2X6 119 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 TOMM5Q8N4H5 51 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 C10orf126Q8N4M7 172 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 NUP35Q8NFH5 326 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 OR4B1Q8NGF8 309 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 TERB2Q8NHR7 220 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 DNAJC30Q96LL9 226 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 CCDC32Q9BV29 185 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 NDUFA4L2Q9NRX3 87 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 SPANXA1Q9NS26 97 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 SLC39A9Q9NUM3 307 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 MRPL16Q9NX20 251 aaKnown RBP1.98□□□□□ -2.09
SHQ1-208ENST00000482785 FKBP11Q9NYL4 201 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 SCP2D1Q9UJQ7 156 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 V9GYH0 126 aa1.98□□□□□ -2.09
SHQ1-208ENST00000482785 PIGBOS1A0A0B4J2F0 54 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 DUXBA0A1W2PPF3 345 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 A0A1W2PRE2 83 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 GNRH2O43555 120 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 ZNF73O43830 326 aaPredicted RBP1.97□□□□□ -2.09
SHQ1-208ENST00000482785 SNAPC5O75971 98 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 CD3DP04234 171 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 APELAP0DMC3 54 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 SCGB1A1P11684 91 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 IL7P13232 177 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 LGALS3P17931 250 aaKnown RBP1.97□□□□□ -2.09
SHQ1-208ENST00000482785 FXYD4P59646 89 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 YPEL3P61236 119 aaPredicted RBP1.97□□□□□ -2.09
SHQ1-208ENST00000482785 WT1-ASQ06250 92 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 SURF2Q15527 256 aaPredicted RBP1.97□□□□□ -2.09
SHQ1-208ENST00000482785 SAMD13Q5VXD3 122 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 KTN1-AS1Q86SY8 53 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 LHFPL1Q86WI0 220 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 OR5C1Q8NGR4 320 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 CMTM2Q8TAZ6 248 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 LSM10Q969L4 123 aaKnown RBP1.97□□□□□ -2.09
SHQ1-208ENST00000482785 IMMP2LQ96T52 175 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 TSC22D3Q99576 134 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 SLC25A21Q9BQT8 299 aaPredicted RBP1.97□□□□□ -2.09
SHQ1-208ENST00000482785 ZNF471Q9BX82 626 aaPredicted RBP1.97□□□□□ -2.09
SHQ1-208ENST00000482785 LAMTOR3Q9UHA4 124 aa1.97□□□□□ -2.09
SHQ1-208ENST00000482785 C3orf85A0A1B0GTC6 90 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 C11orf86A6NJI1 115 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 I3L2K1 104 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 K7EIM0 57 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 NDUFA4O00483 81 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 LYRM1O43325 122 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 MT2AP02795 61 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 CTSDP07339 412 aaPredicted RBP1.96□□□□□ -2.1
SHQ1-208ENST00000482785 CTSGP08311 255 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 SRIP30626 198 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 RPL28P46779 137 aaKnown RBP1.96□□□□□ -2.1
SHQ1-208ENST00000482785 PRCDQ00LT1 54 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 RRN3P1Q2M238 152 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 LINC01554Q52M75 96 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 IGFL1Q6UW32 110 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 LYZL1Q6UWQ5 148 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 MIR17HGQ75NE6 70 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 OR4C16Q8NGL9 310 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 SCGB3A1Q96QR1 104 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 FXYD6Q9H0Q3 95 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 COPZ2Q9P299 210 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 CACFD1Q9UGQ2 172 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 NAT8Q9UHE5 227 aa1.96□□□□□ -2.1
SHQ1-208ENST00000482785 TRAV14DV4A0A0A6YYC5 116 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 TRAV2A0A0B4J234 112 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 TMEM189A5PLL7 270 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 OR2T8A6NH00 312 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 CRYM-AS1A6NIL9 109 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 G3V3Q6 166 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 H3BT86 120 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 CORTO00230 105 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 NDUFB6O95139 128 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 ERHP84090 104 aaKnown RBP1.95□□□□□ -2.1
SHQ1-208ENST00000482785 NMSQ5H8A3 153 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 HIST3H2BBQ8N257 126 aa1.95□□□□□ -2.1
SHQ1-208ENST00000482785 SPRR2FQ96RM1 72 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms