RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 ASCC3Q8N3C0 2202 aaKnown RBP3.05□□□□□ -1.92
RBM39-233ENST00000482563 NCOA2Q15596 1464 aa3.05□□□□□ -1.92
RBM39-233ENST00000482563 ZFHX3Q15911 3703 aa3.05□□□□□ -1.92
RBM39-233ENST00000482563 C10orf99Q6UWK7 81 aa3.05□□□□□ -1.92
RBM39-233ENST00000482563 TMEM131LA2VDJ0 1609 aa3.04□□□□□ -1.92
RBM39-233ENST00000482563 ANKARQ7Z5J8 1434 aa3.04□□□□□ -1.92
RBM39-233ENST00000482563 IQGAP3Q86VI3 1631 aa3.04□□□□□ -1.92
RBM39-233ENST00000482563 TRBV30A0A0K0K1B3 111 aa3.04□□□□□ -1.92
RBM39-233ENST00000482563 ARMS2P0C7Q2 107 aa3.04□□□□□ -1.92
RBM39-233ENST00000482563 LINC00472Q9H8W2 130 aa3.04□□□□□ -1.92
RBM39-233ENST00000482563 ACYP2P14621 99 aa3.03□□□□□ -1.92
RBM39-233ENST00000482563 C18orf32Q8TCD1 76 aa3.03□□□□□ -1.92
RBM39-233ENST00000482563 COL4A1P02462 1669 aa3.03□□□□□ -1.92
RBM39-233ENST00000482563 ACYP1P07311 99 aa3.02□□□□□ -1.93
RBM39-233ENST00000482563 SPRR4Q96PI1 79 aa3.02□□□□□ -1.93
RBM39-233ENST00000482563 ZC3H13Q5T200 1668 aaKnown RBP3.02□□□□□ -1.93
RBM39-233ENST00000482563 A0A087WVE0 104 aa3.02□□□□□ -1.93
RBM39-233ENST00000482563 KCPQ6ZWJ8 1503 aa3.01□□□□□ -1.93
RBM39-233ENST00000482563 UGGT2Q9NYU1 1516 aa3.01□□□□□ -1.93
RBM39-233ENST00000482563 A0A1B0GWA3 101 aa3.01□□□□□ -1.93
RBM39-233ENST00000482563 SPINT3P49223 89 aa3.01□□□□□ -1.93
RBM39-233ENST00000482563 PROK2Q9HC23 129 aa3.01□□□□□ -1.93
RBM39-233ENST00000482563 NCR3O14931 201 aa3□□□□□ -1.93
RBM39-233ENST00000482563 PRB1P04280 392 aa3□□□□□ -1.93
RBM39-233ENST00000482563 MAP2P11137 1827 aaKnown RBP3□□□□□ -1.93
RBM39-233ENST00000482563 F5P12259 2224 aa2.99□□□□□ -1.93
RBM39-233ENST00000482563 A0A096LNT2 108 aa2.99□□□□□ -1.93
RBM39-233ENST00000482563 ABCC2Q92887 1545 aa2.99□□□□□ -1.93
RBM39-233ENST00000482563 FBN1P35555 2871 aaKnown RBP2.99□□□□□ -1.93
RBM39-233ENST00000482563 LY6G6CO95867 125 aa2.99□□□□□ -1.93
RBM39-233ENST00000482563 PTPN23Q9H3S7 1636 aa2.98□□□□□ -1.93
RBM39-233ENST00000482563 LTN1O94822 1766 aa2.98□□□□□ -1.93
RBM39-233ENST00000482563 MYO5CQ9NQX4 1742 aa2.98□□□□□ -1.93
RBM39-233ENST00000482563 MYMXA0A1B0GTQ4 84 aa2.97□□□□□ -1.93
RBM39-233ENST00000482563 MGPP08493 103 aa2.97□□□□□ -1.93
RBM39-233ENST00000482563 TECTAO75443 2155 aa2.97□□□□□ -1.93
RBM39-233ENST00000482563 MYO7AQ13402 2215 aa2.96□□□□□ -1.93
RBM39-233ENST00000482563 LEPROTL1O95214 131 aa2.96□□□□□ -1.93
RBM39-233ENST00000482563 HMGN3Q15651 99 aa2.96□□□□□ -1.93
RBM39-233ENST00000482563 LINC00575Q6W349 94 aa2.96□□□□□ -1.93
RBM39-233ENST00000482563 NUP188Q5SRE5 1749 aa2.96□□□□□ -1.94
RBM39-233ENST00000482563 DNAJC13O75165 2243 aa2.96□□□□□ -1.94
RBM39-233ENST00000482563 ABCC1P33527 1531 aa2.96□□□□□ -1.94
RBM39-233ENST00000482563 PLAC4Q8WY50 150 aa2.96□□□□□ -1.94
RBM39-233ENST00000482563 PLAC8Q9NZF1 115 aa2.95□□□□□ -1.94
RBM39-233ENST00000482563 FLG2Q5D862 2391 aaPredicted RBP2.95□□□□□ -1.94
RBM39-233ENST00000482563 SSC5DA1L4H1 1573 aa2.94□□□□□ -1.94
RBM39-233ENST00000482563 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.94□□□□□ -1.94
RBM39-233ENST00000482563 RGPD2P0DJD1 1756 aa2.94□□□□□ -1.94
RBM39-233ENST00000482563 GVQW2A0A096LPI5 108 aaPredicted RBP2.93□□□□□ -1.94
RBM39-233ENST00000482563 KDM3BQ7LBC6 1761 aa2.93□□□□□ -1.94
RBM39-233ENST00000482563 D6R8Y8 96 aa2.93□□□□□ -1.94
RBM39-233ENST00000482563 HEPN1Q6WQI6 88 aa2.93□□□□□ -1.94
RBM39-233ENST00000482563 MUSTN1Q8IVN3 82 aa2.93□□□□□ -1.94
RBM39-233ENST00000482563 LINC00846Q9NV44 126 aa2.93□□□□□ -1.94
RBM39-233ENST00000482563 G3V318 75 aa2.92□□□□□ -1.94
RBM39-233ENST00000482563 SMIM4Q8WVI0 70 aa2.92□□□□□ -1.94
RBM39-233ENST00000482563 KNDC1Q76NI1 1749 aa2.92□□□□□ -1.94
RBM39-233ENST00000482563 ZDBF2Q9HCK1 2354 aa2.92□□□□□ -1.94
RBM39-233ENST00000482563 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
RBM39-233ENST00000482563 COX17Q14061 63 aa2.91□□□□□ -1.94
RBM39-233ENST00000482563 PLGLAQ15195 96 aa2.91□□□□□ -1.94
RBM39-233ENST00000482563 NHSL1Q5SYE7 1610 aa2.91□□□□□ -1.94
RBM39-233ENST00000482563 LRRC9Q6ZRR7 1453 aa2.91□□□□□ -1.94
RBM39-233ENST00000482563 DEFB121Q5J5C9 76 aa2.9□□□□□ -1.94
RBM39-233ENST00000482563 CUX1P39880 1505 aa2.9□□□□□ -1.94
RBM39-233ENST00000482563 Q6ZRX8 168 aa2.9□□□□□ -1.95
RBM39-233ENST00000482563 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
RBM39-233ENST00000482563 DEFB107AQ8IZN7 70 aa2.9□□□□□ -1.95
RBM39-233ENST00000482563 RAPGEF6Q8TEU7 1601 aa2.89□□□□□ -1.95
RBM39-233ENST00000482563 RGPD8O14715 1765 aaPredicted RBP2.89□□□□□ -1.95
RBM39-233ENST00000482563 RGPD5Q99666 1765 aa2.89□□□□□ -1.95
RBM39-233ENST00000482563 SPINK7P58062 85 aa2.89□□□□□ -1.95
RBM39-233ENST00000482563 CEBPZOSA8MTT3 80 aa2.88□□□□□ -1.95
RBM39-233ENST00000482563 SMIM11BQ8TCY0 68 aa2.88□□□□□ -1.95
RBM39-233ENST00000482563 MADDQ8WXG6 1647 aa2.88□□□□□ -1.95
RBM39-233ENST00000482563 RPL37P61927 97 aaKnown RBP2.88□□□□□ -1.95
RBM39-233ENST00000482563 OBSCNQ5VST9 7968 aa2.87□□□□□ -1.95
RBM39-233ENST00000482563 SMIM13P0DJ93 91 aa2.87□□□□□ -1.95
RBM39-233ENST00000482563 KRTAP13-1Q8IUC0 172 aa2.87□□□□□ -1.95
RBM39-233ENST00000482563 UBE2D4Q9Y2X8 147 aa2.87□□□□□ -1.95
RBM39-233ENST00000482563 MAGI3Q5TCQ9 1506 aa2.87□□□□□ -1.95
RBM39-233ENST00000482563 ARFGEF2Q9Y6D5 1785 aa2.87□□□□□ -1.95
RBM39-233ENST00000482563 CRYBG1Q9Y4K1 1723 aa2.86□□□□□ -1.95
RBM39-233ENST00000482563 SCN11AQ9UI33 1791 aa2.86□□□□□ -1.95
RBM39-233ENST00000482563 MROH1Q8NDA8 1641 aa2.85□□□□□ -1.95
RBM39-233ENST00000482563 C6orf201Q7Z4U5 140 aa2.85□□□□□ -1.95
RBM39-233ENST00000482563 TMEM263Q8WUH6 116 aaKnown RBP2.85□□□□□ -1.95
RBM39-233ENST00000482563 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
RBM39-233ENST00000482563 SPINK13Q1W4C9 94 aa2.85□□□□□ -1.95
RBM39-233ENST00000482563 C10orf113Q5VZT2 155 aa2.85□□□□□ -1.95
RBM39-233ENST00000482563 SPATA8Q6RVD6 105 aa2.85□□□□□ -1.95
RBM39-233ENST00000482563 C1orf167Q5SNV9 1468 aa2.84□□□□□ -1.95
RBM39-233ENST00000482563 SHPRHQ149N8 1683 aa2.84□□□□□ -1.95
RBM39-233ENST00000482563 CADP27708 2225 aa2.83□□□□□ -1.96
RBM39-233ENST00000482563 CACNA1CQ13936 2221 aa2.83□□□□□ -1.96
RBM39-233ENST00000482563 DUOX2Q9NRD8 1548 aa2.82□□□□□ -1.96
RBM39-233ENST00000482563 LRRC37A2A6NM11 1700 aa2.82□□□□□ -1.96
RBM39-233ENST00000482563 H0Y9P7 68 aa2.82□□□□□ -1.96
RBM39-233ENST00000482563 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms