RNA–Protein interactions for RNA: ENST00000482050.1

DDR1-243, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-243ENST00000482050 LRP1BQ9NZR2 4599 aa11.3□□□□□ -0.6
DDR1-243ENST00000482050 GVQW2A0A096LPI5 108 aaPredicted RBP11.3□□□□□ -0.6
DDR1-243ENST00000482050 LINC01549A6NIU2 74 aa11.3□□□□□ -0.6
DDR1-243ENST00000482050 HBDP02042 147 aa11.3□□□□□ -0.6
DDR1-243ENST00000482050 SLPIP03973 132 aa11.3□□□□□ -0.6
DDR1-243ENST00000482050 COX6A2Q02221 97 aa11.3□□□□□ -0.6
DDR1-243ENST00000482050 IGHV3OR16-9A0A0B4J2B5 98 aa11.29□□□□□ -0.6
DDR1-243ENST00000482050 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.28□□□□□ -0.6
DDR1-243ENST00000482050 S100A1P23297 94 aa11.28□□□□□ -0.6
DDR1-243ENST00000482050 HAMPP81172 84 aa11.28□□□□□ -0.6
DDR1-243ENST00000482050 CHCHD1Q96BP2 118 aaKnown RBP11.28□□□□□ -0.6
DDR1-243ENST00000482050 CNBPP62633 177 aaKnown RBP11.27□□□□□ -0.61
DDR1-243ENST00000482050 FAM30AQ9NZY2 134 aa11.27□□□□□ -0.61
DDR1-243ENST00000482050 A0A0J9YXV3 536 aa11.26□□□□□ -0.61
DDR1-243ENST00000482050 ZNF561-AS1K7EIQ3 104 aa11.26□□□□□ -0.61
DDR1-243ENST00000482050 NDUFA6P56556 154 aa11.26□□□□□ -0.61
DDR1-243ENST00000482050 PDZD11Q5EBL8 140 aa11.26□□□□□ -0.61
DDR1-243ENST00000482050 C9orf163Q8N9P6 203 aa11.26□□□□□ -0.61
DDR1-243ENST00000482050 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.25□□□□□ -0.61
DDR1-243ENST00000482050 HSBP1O75506 76 aa11.25□□□□□ -0.61
DDR1-243ENST00000482050 SERF1AO75920 110 aa11.25□□□□□ -0.61
DDR1-243ENST00000482050 CDK2AP2O75956 126 aa11.25□□□□□ -0.61
DDR1-243ENST00000482050 APOMO95445 188 aa11.25□□□□□ -0.61
DDR1-243ENST00000482050 FAM19A2Q8N3H0 131 aa11.25□□□□□ -0.61
DDR1-243ENST00000482050 ORAOV1Q8WV07 137 aa11.25□□□□□ -0.61
DDR1-243ENST00000482050 CST9LQ9H4G1 147 aa11.25□□□□□ -0.61
DDR1-243ENST00000482050 IGLV4-69A0A075B6H9 119 aa11.24□□□□□ -0.61
DDR1-243ENST00000482050 LINC00310P59036 64 aa11.24□□□□□ -0.61
DDR1-243ENST00000482050 SPAG11BQ08648 103 aa11.24□□□□□ -0.61
DDR1-243ENST00000482050 PMVKQ15126 192 aa11.24□□□□□ -0.61
DDR1-243ENST00000482050 GEMIN7Q9H840 131 aaKnown RBP11.24□□□□□ -0.61
DDR1-243ENST00000482050 KIAA1109Q2LD37 5005 aa11.23□□□□□ -0.61
DDR1-243ENST00000482050 IGHV3-64A0A075B6Q5 118 aa11.23□□□□□ -0.61
DDR1-243ENST00000482050 A0A087WZ39 114 aa11.23□□□□□ -0.61
DDR1-243ENST00000482050 NUPR1O60356 82 aa11.22□□□□□ -0.61
DDR1-243ENST00000482050 ATP5LO75964 103 aa11.22□□□□□ -0.61
DDR1-243ENST00000482050 XGP55808 180 aa11.22□□□□□ -0.61
DDR1-243ENST00000482050 HERVK_113P63121 156 aa11.22□□□□□ -0.61
DDR1-243ENST00000482050 FAM19A3Q7Z5A8 133 aa11.22□□□□□ -0.61
DDR1-243ENST00000482050 CDKN2A-AS1Q9UH64 79 aa11.22□□□□□ -0.61
DDR1-243ENST00000482050 SEC11AP67812 179 aa11.21□□□□□ -0.61
DDR1-243ENST00000482050 SYCNQ0VAF6 134 aa11.21□□□□□ -0.61
DDR1-243ENST00000482050 OR10D4PQ8NGN7 298 aa11.21□□□□□ -0.61
DDR1-243ENST00000482050 CARD19Q96LW7 228 aa11.21□□□□□ -0.61
DDR1-243ENST00000482050 HIST1H2BKO60814 126 aa11.2□□□□□ -0.62
DDR1-243ENST00000482050 HIST1H2BJP06899 126 aa11.2□□□□□ -0.62
DDR1-243ENST00000482050 HIST1H2BOP23527 126 aa11.2□□□□□ -0.62
DDR1-243ENST00000482050 HIST1H2BBP33778 126 aa11.2□□□□□ -0.62
DDR1-243ENST00000482050 HIST1H2BDP58876 126 aa11.2□□□□□ -0.62
DDR1-243ENST00000482050 HIST1H2BCP62807 126 aa11.2□□□□□ -0.62
DDR1-243ENST00000482050 HIST2H2BEQ16778 126 aa11.2□□□□□ -0.62
DDR1-243ENST00000482050 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.2□□□□□ -0.62
DDR1-243ENST00000482050 LINC00469Q8N7U9 141 aa11.2□□□□□ -0.62
DDR1-243ENST00000482050 HIST1H2BHQ93079 126 aa11.2□□□□□ -0.62
DDR1-243ENST00000482050 CAMK2N2Q96S95 79 aa11.2□□□□□ -0.62
DDR1-243ENST00000482050 HIST1H2BNQ99877 126 aa11.2□□□□□ -0.62
DDR1-243ENST00000482050 HIST1H2BMQ99879 126 aa11.2□□□□□ -0.62
DDR1-243ENST00000482050 TINCRA0A1B0GVN0 87 aa11.19□□□□□ -0.62
DDR1-243ENST00000482050 SDIM1Q6ZPB5 146 aa11.19□□□□□ -0.62
DDR1-243ENST00000482050 Q6ZRU5 148 aa11.19□□□□□ -0.62
DDR1-243ENST00000482050 Q6ZSA8 131 aa11.19□□□□□ -0.62
DDR1-243ENST00000482050 IFI27L1Q96BM0 104 aa11.19□□□□□ -0.62
DDR1-243ENST00000482050 PACRGQ96M98 296 aaPredicted RBP11.18□□□□□ -0.62
DDR1-243ENST00000482050 APOBP04114 4563 aaKnown RBP11.18□□□□□ -0.62
DDR1-243ENST00000482050 C2orf48Q96LS8 159 aa11.17□□□□□ -0.62
DDR1-243ENST00000482050 TOMM7Q9P0U1 55 aa11.17□□□□□ -0.62
DDR1-243ENST00000482050 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.17□□□□□ -0.62
DDR1-243ENST00000482050 PANO1I0J062 215 aa11.16□□□□□ -0.62
DDR1-243ENST00000482050 CHTF8P0CG12 524 aa11.16□□□□□ -0.62
DDR1-243ENST00000482050 SCXQ7RTU7 201 aa11.16□□□□□ -0.62
DDR1-243ENST00000482050 LINC01561Q8N1V8 128 aa11.16□□□□□ -0.62
DDR1-243ENST00000482050 CHAC1Q9BUX1 264 aa11.16□□□□□ -0.62
DDR1-243ENST00000482050 KRTAP17-1Q9BYP8 105 aa11.16□□□□□ -0.62
DDR1-243ENST00000482050 LEPROTL1O95214 131 aa11.15□□□□□ -0.62
DDR1-243ENST00000482050 SMR3BP02814 79 aaPredicted RBP11.15□□□□□ -0.62
DDR1-243ENST00000482050 IGLC3P0DOY3 106 aa11.15□□□□□ -0.62
DDR1-243ENST00000482050 FABP4P15090 132 aa11.15□□□□□ -0.62
DDR1-243ENST00000482050 KIAA0087Q14695 138 aa11.15□□□□□ -0.62
DDR1-243ENST00000482050 IGLV5-45A0A087WSX0 123 aa11.14□□□□□ -0.63
DDR1-243ENST00000482050 IGKV2-24A0A0C4DH68 120 aa11.14□□□□□ -0.63
DDR1-243ENST00000482050 H0Y8G0 127 aa11.14□□□□□ -0.63
DDR1-243ENST00000482050 NDUFA1O15239 70 aa11.14□□□□□ -0.63
DDR1-243ENST00000482050 SPINK8P0C7L1 97 aa11.14□□□□□ -0.63
DDR1-243ENST00000482050 C10orf25Q5T742 122 aa11.14□□□□□ -0.63
DDR1-243ENST00000482050 C2orf82Q6UX34 121 aa11.14□□□□□ -0.63
DDR1-243ENST00000482050 UNQ6190/PRO20217Q6UXQ8 127 aa11.14□□□□□ -0.63
DDR1-243ENST00000482050 CHTOPQ9Y3Y2 248 aaKnown RBP11.14□□□□□ -0.63
DDR1-243ENST00000482050 HSPG2P98160 4391 aa11.14□□□□□ -0.63
DDR1-243ENST00000482050 RYR1P21817 5038 aa11.13□□□□□ -0.63
DDR1-243ENST00000482050 SMIM1B2RUZ4 78 aa11.13□□□□□ -0.63
DDR1-243ENST00000482050 PRSS2P07478 247 aa11.13□□□□□ -0.63
DDR1-243ENST00000482050 DNAH8Q96JB1 4490 aa11.13□□□□□ -0.63
DDR1-243ENST00000482050 C11orf86A6NJI1 115 aa11.12□□□□□ -0.63
DDR1-243ENST00000482050 CIRBP-AS1Q8TBR5 109 aa11.12□□□□□ -0.63
DDR1-243ENST00000482050 DPH3Q96FX2 82 aa11.12□□□□□ -0.63
DDR1-243ENST00000482050 A0A096LNI7 61 aa11.11□□□□□ -0.63
DDR1-243ENST00000482050 H3BRM9 83 aa11.11□□□□□ -0.63
DDR1-243ENST00000482050 ZNF22P17026 224 aaPredicted RBP11.11□□□□□ -0.63
DDR1-243ENST00000482050 C6orf226Q5I0X4 101 aa11.11□□□□□ -0.63
DDR1-243ENST00000482050 HSPB8Q9UJY1 196 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 139.5 ms