RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 NMES1Q9C002 83 aa0.89□□□□□ -2.27
USH2A-204ENST00000481786 RSL24D1Q9UHA3 163 aaKnown RBP0.89□□□□□ -2.27
USH2A-204ENST00000481786 MUC5ACP98088 5654 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 A8MWP4 228 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 H3BP45 60 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 H3BVH4 76 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 BPY2O14599 106 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 NOL3O60936 208 aaKnown RBP0.88□□□□□ -2.27
USH2A-204ENST00000481786 ARMS2P0C7Q2 107 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 SLC25A6P12236 298 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 TPT1P13693 172 aaKnown RBP0.88□□□□□ -2.27
USH2A-204ENST00000481786 FGF7P21781 194 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 RPL12P30050 165 aaKnown RBP0.88□□□□□ -2.27
USH2A-204ENST00000481786 ZNF80P51504 273 aaPredicted RBP0.88□□□□□ -2.27
USH2A-204ENST00000481786 PRLHP81277 87 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 MXD1Q05195 221 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 MLLT11Q13015 90 aaPredicted RBP0.88□□□□□ -2.27
USH2A-204ENST00000481786 RNASE10Q5GAN6 216 aaKnown RBP0.88□□□□□ -2.27
USH2A-204ENST00000481786 FAM74A1Q5RGS3 127 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 ZFP1Q6P2D0 407 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 ATP11AUNQ6ZP68 121 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 FAM231DQ6ZW35 169 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 SSBP3-AS1Q7Z2R9 100 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 KRTAP8-1Q8IUC2 63 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 CLVS1Q8IUQ0 354 aaPredicted RBP0.88□□□□□ -2.27
USH2A-204ENST00000481786 OR5C1Q8NGR4 320 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 CMTM2Q8TAZ6 248 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 FXYD5Q96DB9 178 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 S100A16Q96FQ6 103 aaKnown RBP0.88□□□□□ -2.27
USH2A-204ENST00000481786 SPRR4Q96PI1 79 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 MGST2Q99735 147 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 CCDC32Q9BV29 185 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 GGACTQ9BVM4 153 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 SCN3BQ9NY72 215 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 CCDC59Q9P031 241 aaKnown RBP0.88□□□□□ -2.27
USH2A-204ENST00000481786 C6orf48Q9UBA6 75 aa0.88□□□□□ -2.27
USH2A-204ENST00000481786 C14orf166Q9Y224 244 aaKnown RBP0.88□□□□□ -2.27
USH2A-204ENST00000481786 LSM2Q9Y333 95 aaKnown RBP0.88□□□□□ -2.27
USH2A-204ENST00000481786 ZNF706Q9Y5V0 76 aaPredicted RBP0.88□□□□□ -2.27
USH2A-204ENST00000481786 TRBV30A0A0K0K1B3 111 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 FAM236DA0A1B0GTK5 79 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 SERTM2A0A1B0GWG4 89 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 TRDV1A0A1B0GX56 115 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 FABP5P3A8MUU1 101 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 C1orf196B1AJZ1 125 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 B4DEV8 164 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 M0QY20 66 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 FAM236CP0DP71 79 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 TMBIM6P55061 237 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 UBE2G2P60604 165 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 RRAS2P62070 204 aaPredicted RBP0.87□□□□□ -2.27
USH2A-204ENST00000481786 PPP1R1AQ13522 171 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 COTL1Q14019 142 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 DNAL1Q4LDG9 190 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 SAPCD1Q5SSQ6 148 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 MIC13Q5XKP0 118 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 RNASEKQ6P5S7 137 aaKnown RBP0.87□□□□□ -2.27
USH2A-204ENST00000481786 UQCC3Q6UW78 93 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 GOLT1AQ6ZVE7 132 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 FAM19A3Q7Z5A8 133 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 CBLN2Q8IUK8 224 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 ST20-AS1Q8NBB2 130 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 OR5H6Q8NGV6 325 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 AP3S1Q92572 193 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 FAM167A-AS1Q96KT0 104 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 HYLS1Q96M11 299 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 MARVELD1Q9BSK0 173 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 LIMD2Q9BT23 127 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 C9orf16Q9BUW7 83 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 OTORQ9NRC9 128 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 NDUFB11Q9NX14 153 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 PSENENQ9NZ42 101 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 ALG5Q9Y673 324 aa0.87□□□□□ -2.27
USH2A-204ENST00000481786 ZNF727A8MUV8 499 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 KRBOX1C9JBD0 128 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 NCR2O95944 276 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 MT1BP07438 61 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 METTL15P1P0C7V9 234 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 SMIM17P0DL12 118 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 MT4P47944 62 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 NKX2-5P52952 324 aaPredicted RBP0.86□□□□□ -2.27
USH2A-204ENST00000481786 IL15RAQ13261 267 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 IL18Q14116 193 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 C10orf91Q5T1B1 145 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 Q5VV11 94 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 C22orf42Q6IC83 251 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 TMEM14EPQ6UXP3 125 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 UNQ6190/PRO20217Q6UXQ8 127 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 FAM19A1Q7Z5A9 133 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 PACRGLQ8N7B6 248 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 ORAOV1Q8WV07 137 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 SMIM8Q96KF7 97 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 TMEM242Q9NWH2 141 aa0.86□□□□□ -2.27
USH2A-204ENST00000481786 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.85□□□□□ -2.27
USH2A-204ENST00000481786 SMIM31A0A1B0GVY4 71 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 IGKV2-29A2NJV5 120 aaPredicted RBP0.85□□□□□ -2.27
USH2A-204ENST00000481786 RAB19A4D1S5 217 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 GRIFINA4D1Z8 144 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 OR7C2O60412 319 aa0.85□□□□□ -2.27
USH2A-204ENST00000481786 UPK1BO75841 260 aa0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms