RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 MAGI2Q86UL8 1455 aa1.29□□□□□ -2.2
CUL3-209ENST00000481135 IQGAP2Q13576 1575 aa1.29□□□□□ -2.2
CUL3-209ENST00000481135 CLTCL1P53675 1640 aa1.29□□□□□ -2.2
CUL3-209ENST00000481135 ITSN2Q9NZM3 1697 aa1.29□□□□□ -2.2
CUL3-209ENST00000481135 KANTRA0A1W2PQU2 76 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 COX6CP09669 75 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 FAUP35544 74 aaKnown RBP1.28□□□□□ -2.2
CUL3-209ENST00000481135 SNRPFP62306 86 aaKnown RBP1.28□□□□□ -2.2
CUL3-209ENST00000481135 SMIM5Q71RC9 77 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 ZNF720Q7Z2F6 126 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 NPVFQ9HCQ7 196 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 NXT2Q9NPJ8 142 aaKnown RBP1.28□□□□□ -2.2
CUL3-209ENST00000481135 ARL2-SNX15V9GYD0 113 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 V9GYS6 101 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 TROQ12816 1431 aaPredicted RBP1.28□□□□□ -2.2
CUL3-209ENST00000481135 ATP7BP35670 1465 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 IQSEC2Q5JU85 1478 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 HMGXB3Q12766 1538 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 DNMBPQ6XZF7 1577 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 WIZO95785 1651 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 GCC2Q8IWJ2 1684 aa1.28□□□□□ -2.2
CUL3-209ENST00000481135 POLR1AO95602 1720 aaPredicted RBP1.28□□□□□ -2.2
CUL3-209ENST00000481135 KIAA0586Q9BVV6 1533 aa1.27□□□□□ -2.21
CUL3-209ENST00000481135 DUOX2Q9NRD8 1548 aa1.27□□□□□ -2.21
CUL3-209ENST00000481135 ERVK-7P63135 1459 aa1.27□□□□□ -2.21
CUL3-209ENST00000481135 MAGI1Q96QZ7 1491 aaPredicted RBP1.27□□□□□ -2.21
CUL3-209ENST00000481135 NMBP08949 121 aa1.27□□□□□ -2.21
CUL3-209ENST00000481135 IGLC1P0CG04 106 aa1.27□□□□□ -2.21
CUL3-209ENST00000481135 FAM223AQ8IWN6 122 aa1.27□□□□□ -2.21
CUL3-209ENST00000481135 TOMM5Q8N4H5 51 aa1.27□□□□□ -2.21
CUL3-209ENST00000481135 SIPA1L3O60292 1781 aaPredicted RBP1.26□□□□□ -2.21
CUL3-209ENST00000481135 CFAP43Q8NDM7 1665 aa1.26□□□□□ -2.21
CUL3-209ENST00000481135 LAMC1P11047 1609 aa1.26□□□□□ -2.21
CUL3-209ENST00000481135 BIVM-ERCC5R4GMW8 1640 aa1.26□□□□□ -2.21
CUL3-209ENST00000481135 NFAT5O94916 1531 aa1.26□□□□□ -2.21
CUL3-209ENST00000481135 MAGI3Q5TCQ9 1506 aa1.26□□□□□ -2.21
CUL3-209ENST00000481135 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.26□□□□□ -2.21
CUL3-209ENST00000481135 FXYD6-FXYD2A0A087WZ82 144 aa1.26□□□□□ -2.21
CUL3-209ENST00000481135 SMIM11AP58511 58 aa1.26□□□□□ -2.21
CUL3-209ENST00000481135 C9orf62Q8N4C0 152 aa1.26□□□□□ -2.21
CUL3-209ENST00000481135 VAMP8Q9BV40 100 aa1.26□□□□□ -2.21
CUL3-209ENST00000481135 FXYD6Q9H0Q3 95 aa1.26□□□□□ -2.21
CUL3-209ENST00000481135 NESP48681 1621 aa1.26□□□□□ -2.21
CUL3-209ENST00000481135 SAMD9LQ8IVG5 1584 aa1.25□□□□□ -2.21
CUL3-209ENST00000481135 INO80Q9ULG1 1556 aaPredicted RBP1.25□□□□□ -2.21
CUL3-209ENST00000481135 LRRC7Q96NW7 1537 aa1.25□□□□□ -2.21
CUL3-209ENST00000481135 EDC4Q6P2E9 1401 aaKnown RBP1.25□□□□□ -2.21
CUL3-209ENST00000481135 SNRPGP15A8MWD9 76 aa1.25□□□□□ -2.21
CUL3-209ENST00000481135 COX17Q14061 63 aa1.25□□□□□ -2.21
CUL3-209ENST00000481135 ALKAL2Q6UX46 152 aa1.25□□□□□ -2.21
CUL3-209ENST00000481135 LOC285556D6RIA3 1793 aa1.25□□□□□ -2.21
CUL3-209ENST00000481135 KDM5AP29375 1690 aaKnown RBP1.25□□□□□ -2.21
CUL3-209ENST00000481135 ABCA9Q8IUA7 1624 aa1.25□□□□□ -2.21
CUL3-209ENST00000481135 ADCY10Q96PN6 1610 aa1.25□□□□□ -2.21
CUL3-209ENST00000481135 RNF17Q9BXT8 1623 aaKnown RBP1.25□□□□□ -2.21
CUL3-209ENST00000481135 TTC37Q6PGP7 1564 aa1.25□□□□□ -2.21
CUL3-209ENST00000481135 URB2Q14146 1524 aaKnown RBP1.25□□□□□ -2.21
CUL3-209ENST00000481135 MLH3Q9UHC1 1453 aa1.24□□□□□ -2.21
CUL3-209ENST00000481135 MAP2P11137 1827 aaKnown RBP1.24□□□□□ -2.21
CUL3-209ENST00000481135 CROCC2H7BZ55 1655 aa1.24□□□□□ -2.21
CUL3-209ENST00000481135 PRH1P02810 166 aa1.24□□□□□ -2.21
CUL3-209ENST00000481135 S100A3P33764 101 aa1.24□□□□□ -2.21
CUL3-209ENST00000481135 LCN9Q8WX39 176 aa1.24□□□□□ -2.21
CUL3-209ENST00000481135 S100A16Q96FQ6 103 aaKnown RBP1.24□□□□□ -2.21
CUL3-209ENST00000481135 PRO1933Q9H354 126 aa1.24□□□□□ -2.21
CUL3-209ENST00000481135 ABRACLQ9P1F3 81 aa1.24□□□□□ -2.21
CUL3-209ENST00000481135 TARBP1Q13395 1621 aaKnown RBP1.24□□□□□ -2.21
CUL3-209ENST00000481135 ABCA8O94911 1581 aa1.24□□□□□ -2.21
CUL3-209ENST00000481135 MAST1Q9Y2H9 1570 aa1.24□□□□□ -2.21
CUL3-209ENST00000481135 ABCC3O15438 1527 aa1.24□□□□□ -2.21
CUL3-209ENST00000481135 ABCC6O95255 1503 aa1.24□□□□□ -2.21
CUL3-209ENST00000481135 PARP14Q460N5 1801 aa1.24□□□□□ -2.21
CUL3-209ENST00000481135 M0R3E3 92 aa1.23□□□□□ -2.21
CUL3-209ENST00000481135 PIN1P1O15428 100 aa1.23□□□□□ -2.21
CUL3-209ENST00000481135 SFTA3P0C7M3 94 aa1.23□□□□□ -2.21
CUL3-209ENST00000481135 Q5BKY6 102 aa1.23□□□□□ -2.21
CUL3-209ENST00000481135 IFT172Q9UG01 1749 aa1.23□□□□□ -2.21
CUL3-209ENST00000481135 CDC42BPGQ6DT37 1551 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 TRPM2O94759 1503 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 CPS1P31327 1500 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 AGLP35573 1532 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 ATP7AQ04656 1500 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 A0A087WWC5 75 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 C7orf77A4D0Y5 90 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 FAM223BA6NKX1 122 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 UMAD1C9J7I0 102 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 ATOX1O00244 68 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 NDUFC1O43677 76 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 CFDP00746 253 aaPredicted RBP1.22□□□□□ -2.21
CUL3-209ENST00000481135 SPINK7P58062 85 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 SNRPGP62308 76 aaKnown RBP1.22□□□□□ -2.21
CUL3-209ENST00000481135 ADIRFQ15847 76 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 PMCHL1Q16048 86 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 PYY3Q5JQD4 70 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 CACFD1Q9UGQ2 172 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 CDC42BPAQ5VT25 1732 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 MYO5CQ9NQX4 1742 aa1.22□□□□□ -2.21
CUL3-209ENST00000481135 DIP2AQ14689 1571 aa1.21□□□□□ -2.22
CUL3-209ENST00000481135 UGGT1Q9NYU2 1555 aa1.21□□□□□ -2.22
CUL3-209ENST00000481135 ABCC1P33527 1531 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms