RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 COX6A2Q02221 97 aa8.13□□□□□ -1.11
SHROOM3-205ENST00000481002 C14orf177Q52M58 125 aa8.13□□□□□ -1.11
SHROOM3-205ENST00000481002 CFAP161Q6P656 301 aa8.13□□□□□ -1.11
SHROOM3-205ENST00000481002 Q8N814 137 aa8.13□□□□□ -1.11
SHROOM3-205ENST00000481002 IFI27L1Q96BM0 104 aa8.13□□□□□ -1.11
SHROOM3-205ENST00000481002 COX7A2LO14548 114 aa8.12□□□□□ -1.11
SHROOM3-205ENST00000481002 LEPROTL1O95214 131 aa8.12□□□□□ -1.11
SHROOM3-205ENST00000481002 PGPEP1Q9NXJ5 209 aa8.12□□□□□ -1.11
SHROOM3-205ENST00000481002 A0A0J9YXV3 536 aa8.11□□□□□ -1.11
SHROOM3-205ENST00000481002 KRTAP10-2P60368 255 aa8.11□□□□□ -1.11
SHROOM3-205ENST00000481002 SPATA12Q7Z6I5 190 aa8.11□□□□□ -1.11
SHROOM3-205ENST00000481002 C5orf38Q86SI9 138 aa8.11□□□□□ -1.11
SHROOM3-205ENST00000481002 C15orf56Q8N910 161 aa8.11□□□□□ -1.11
SHROOM3-205ENST00000481002 HSPB8Q9UJY1 196 aa8.11□□□□□ -1.11
SHROOM3-205ENST00000481002 A0A087WZ39 114 aa8.1□□□□□ -1.11
SHROOM3-205ENST00000481002 TRAV12-1A0A0B4J245 112 aa8.1□□□□□ -1.11
SHROOM3-205ENST00000481002 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
SHROOM3-205ENST00000481002 TINCRA0A1B0GVN0 87 aa8.1□□□□□ -1.11
SHROOM3-205ENST00000481002 PRSS1P07477 247 aa8.1□□□□□ -1.11
SHROOM3-205ENST00000481002 HERVK_113P63121 156 aa8.1□□□□□ -1.11
SHROOM3-205ENST00000481002 LINC01561Q8N1V8 128 aa8.1□□□□□ -1.11
SHROOM3-205ENST00000481002 NTN5Q8WTR8 489 aaPredicted RBP8.1□□□□□ -1.11
SHROOM3-205ENST00000481002 PACRGQ96M98 296 aaPredicted RBP8.1□□□□□ -1.11
SHROOM3-205ENST00000481002 HECTD4Q9Y4D8 3996 aa8.1□□□□□ -1.11
SHROOM3-205ENST00000481002 FABP4P15090 132 aa8.09□□□□□ -1.11
SHROOM3-205ENST00000481002 MALP21145 153 aa8.09□□□□□ -1.11
SHROOM3-205ENST00000481002 GEMIN7Q9H840 131 aaKnown RBP8.09□□□□□ -1.11
SHROOM3-205ENST00000481002 IGLV5-45A0A087WSX0 123 aa8.08□□□□□ -1.12
SHROOM3-205ENST00000481002 GVQW2A0A096LPI5 108 aaPredicted RBP8.08□□□□□ -1.12
SHROOM3-205ENST00000481002 APOMO95445 188 aa8.08□□□□□ -1.12
SHROOM3-205ENST00000481002 CDPF1Q6NVV7 123 aa8.08□□□□□ -1.12
SHROOM3-205ENST00000481002 IGLV4-69A0A075B6H9 119 aa8.07□□□□□ -1.12
SHROOM3-205ENST00000481002 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.07□□□□□ -1.12
SHROOM3-205ENST00000481002 IGHV3-64A0A075B6Q5 118 aa8.07□□□□□ -1.12
SHROOM3-205ENST00000481002 hDV102S1A0JD36 115 aa8.07□□□□□ -1.12
SHROOM3-205ENST00000481002 IGLC3P0DOY3 106 aa8.07□□□□□ -1.12
SHROOM3-205ENST00000481002 CDKN2A-AS1Q9UH64 79 aa8.07□□□□□ -1.12
SHROOM3-205ENST00000481002 FUSP35637 526 aaKnown RBP eCLIP8.06□□□□□ -1.12
SHROOM3-205ENST00000481002 HIGD2BQ4VC39 106 aa8.06□□□□□ -1.12
SHROOM3-205ENST00000481002 CHTOPQ9Y3Y2 248 aaKnown RBP8.06□□□□□ -1.12
SHROOM3-205ENST00000481002 IGLV5-52A0A0A0MRZ9 124 aa8.05□□□□□ -1.12
SHROOM3-205ENST00000481002 F8VRH5 84 aa8.05□□□□□ -1.12
SHROOM3-205ENST00000481002 SLPIP03973 132 aa8.05□□□□□ -1.12
SHROOM3-205ENST00000481002 CNBPP62633 177 aaKnown RBP8.05□□□□□ -1.12
SHROOM3-205ENST00000481002 ODF1Q14990 250 aa8.05□□□□□ -1.12
SHROOM3-205ENST00000481002 LINC00469Q8N7U9 141 aa8.05□□□□□ -1.12
SHROOM3-205ENST00000481002 OR10D4PQ8NGN7 298 aa8.05□□□□□ -1.12
SHROOM3-205ENST00000481002 CHAC1Q9BUX1 264 aa8.05□□□□□ -1.12
SHROOM3-205ENST00000481002 MAP1LC3CQ9BXW4 147 aa8.05□□□□□ -1.12
SHROOM3-205ENST00000481002 PKHD1P08F94 4074 aa8.05□□□□□ -1.12
SHROOM3-205ENST00000481002 C11orf86A6NJI1 115 aa8.04□□□□□ -1.12
SHROOM3-205ENST00000481002 ZNF561-AS1K7EIQ3 104 aa8.04□□□□□ -1.12
SHROOM3-205ENST00000481002 S100A6P06703 90 aa8.04□□□□□ -1.12
SHROOM3-205ENST00000481002 ORAOV1Q8WV07 137 aa8.04□□□□□ -1.12
SHROOM3-205ENST00000481002 C2orf48Q96LS8 159 aa8.04□□□□□ -1.12
SHROOM3-205ENST00000481002 MRPL35Q9NZE8 188 aaKnown RBP8.04□□□□□ -1.12
SHROOM3-205ENST00000481002 C16orf90A8MZG2 172 aa8.03□□□□□ -1.12
SHROOM3-205ENST00000481002 H0Y8G0 127 aa8.03□□□□□ -1.12
SHROOM3-205ENST00000481002 ZNF22P17026 224 aaPredicted RBP8.03□□□□□ -1.12
SHROOM3-205ENST00000481002 KIAA0087Q14695 138 aa8.03□□□□□ -1.12
SHROOM3-205ENST00000481002 HIST3H2BBQ8N257 126 aa8.03□□□□□ -1.12
SHROOM3-205ENST00000481002 C9orf163Q8N9P6 203 aa8.03□□□□□ -1.12
SHROOM3-205ENST00000481002 LINC00526Q96FQ7 95 aa8.03□□□□□ -1.12
SHROOM3-205ENST00000481002 DNAH5Q8TE73 4624 aa8.03□□□□□ -1.12
SHROOM3-205ENST00000481002 SMIM1B2RUZ4 78 aa8.02□□□□□ -1.13
SHROOM3-205ENST00000481002 F8WDY8 70 aa8.02□□□□□ -1.13
SHROOM3-205ENST00000481002 H3BRM9 83 aa8.02□□□□□ -1.13
SHROOM3-205ENST00000481002 SYS1-DBNDD2H3BUS1 97 aa8.02□□□□□ -1.13
SHROOM3-205ENST00000481002 GCSHP23434 173 aa8.02□□□□□ -1.13
SHROOM3-205ENST00000481002 SPAG11BQ08648 103 aa8.02□□□□□ -1.13
SHROOM3-205ENST00000481002 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.01□□□□□ -1.13
SHROOM3-205ENST00000481002 C5orf52A6NGY3 159 aa8.01□□□□□ -1.13
SHROOM3-205ENST00000481002 C3orf79P0CE67 100 aa8.01□□□□□ -1.13
SHROOM3-205ENST00000481002 SNRPEP62304 92 aaKnown RBP8.01□□□□□ -1.13
SHROOM3-205ENST00000481002 PET117Q6UWS5 81 aa8.01□□□□□ -1.13
SHROOM3-205ENST00000481002 IGLV5-39A0A0G2JS06 123 aa8□□□□□ -1.13
SHROOM3-205ENST00000481002 SPINK8P0C7L1 97 aa8□□□□□ -1.13
SHROOM3-205ENST00000481002 S100A2P29034 98 aa8□□□□□ -1.13
SHROOM3-205ENST00000481002 KRTAP10-1P60331 282 aa8□□□□□ -1.13
SHROOM3-205ENST00000481002 SYCNQ0VAF6 134 aa8□□□□□ -1.13
SHROOM3-205ENST00000481002 TMEM170BQ5T4T1 132 aa8□□□□□ -1.13
SHROOM3-205ENST00000481002 Q8IZM0 81 aa8□□□□□ -1.13
SHROOM3-205ENST00000481002 DPM2O94777 84 aa7.99□□□□□ -1.13
SHROOM3-205ENST00000481002 PLNP26678 52 aa7.99□□□□□ -1.13
SHROOM3-205ENST00000481002 LINC01620Q4KN68 170 aa7.99□□□□□ -1.13
SHROOM3-205ENST00000481002 C6orf226Q5I0X4 101 aa7.99□□□□□ -1.13
SHROOM3-205ENST00000481002 LINC01545Q5VT33 79 aa7.99□□□□□ -1.13
SHROOM3-205ENST00000481002 CARD19Q96LW7 228 aa7.99□□□□□ -1.13
SHROOM3-205ENST00000481002 CAMK2N2Q96S95 79 aa7.99□□□□□ -1.13
SHROOM3-205ENST00000481002 HIST1H2BLQ99880 126 aa7.99□□□□□ -1.13
SHROOM3-205ENST00000481002 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
SHROOM3-205ENST00000481002 TMEM223A0PJW6 202 aa7.98□□□□□ -1.13
SHROOM3-205ENST00000481002 PRSS2P07478 247 aa7.98□□□□□ -1.13
SHROOM3-205ENST00000481002 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
SHROOM3-205ENST00000481002 Q6ZRU5 148 aa7.98□□□□□ -1.13
SHROOM3-205ENST00000481002 COX7B2Q8TF08 81 aa7.98□□□□□ -1.13
SHROOM3-205ENST00000481002 PMCHL2Q9BQD1 86 aa7.98□□□□□ -1.13
SHROOM3-205ENST00000481002 TOMM7Q9P0U1 55 aa7.98□□□□□ -1.13
SHROOM3-205ENST00000481002 EPPK1P58107 5090 aaKnown RBP7.98□□□□□ -1.13
SHROOM3-205ENST00000481002 NDUFA1O15239 70 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms