RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 COX6A2Q02221 97 aa13.19□□□□□ -0.3
CTSA-206ENST00000480961 ERASQ7Z444 233 aa13.19□□□□□ -0.3
CTSA-206ENST00000480961 TIMM17AQ99595 171 aa13.19□□□□□ -0.3
CTSA-206ENST00000480961 C2orf88Q9BSF0 95 aa13.19□□□□□ -0.3
CTSA-206ENST00000480961 GVQW2A0A096LPI5 108 aaPredicted RBP13.18□□□□□ -0.3
CTSA-206ENST00000480961 UBE2D1P51668 147 aa13.18□□□□□ -0.3
CTSA-206ENST00000480961 LINC00242Q5T6M2 205 aa13.18□□□□□ -0.3
CTSA-206ENST00000480961 FAT1Q14517 4588 aa13.18□□□□□ -0.3
CTSA-206ENST00000480961 A0A096LNJ9 63 aa13.17□□□□□ -0.3
CTSA-206ENST00000480961 XGP55808 180 aa13.17□□□□□ -0.3
CTSA-206ENST00000480961 RAB5BP61020 215 aa13.17□□□□□ -0.3
CTSA-206ENST00000480961 IGHV3OR16-9A0A0B4J2B5 98 aa13.16□□□□□ -0.3
CTSA-206ENST00000480961 NPSP0C0P6 89 aa13.16□□□□□ -0.3
CTSA-206ENST00000480961 CNBPP62633 177 aaKnown RBP13.16□□□□□ -0.3
CTSA-206ENST00000480961 C9orf163Q8N9P6 203 aa13.15□□□□□ -0.3
CTSA-206ENST00000480961 PAPPA-AS1Q5QFB9 102 aa13.14□□□□□ -0.31
CTSA-206ENST00000480961 BAGE3Q86Y29 109 aa13.14□□□□□ -0.31
CTSA-206ENST00000480961 KRTAP17-1Q9BYP8 105 aa13.14□□□□□ -0.31
CTSA-206ENST00000480961 ZNF561-AS1K7EIQ3 104 aa13.13□□□□□ -0.31
CTSA-206ENST00000480961 HBDP02042 147 aa13.13□□□□□ -0.31
CTSA-206ENST00000480961 IGLV4-69A0A075B6H9 119 aa13.12□□□□□ -0.31
CTSA-206ENST00000480961 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.12□□□□□ -0.31
CTSA-206ENST00000480961 A0A0J9YXV3 536 aa13.11□□□□□ -0.31
CTSA-206ENST00000480961 LINC01549A6NIU2 74 aa13.11□□□□□ -0.31
CTSA-206ENST00000480961 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.11□□□□□ -0.31
CTSA-206ENST00000480961 PDZD11Q5EBL8 140 aa13.11□□□□□ -0.31
CTSA-206ENST00000480961 CST9LQ9H4G1 147 aa13.11□□□□□ -0.31
CTSA-206ENST00000480961 IGHV3-64A0A075B6Q5 118 aa13.1□□□□□ -0.31
CTSA-206ENST00000480961 APOMO95445 188 aa13.1□□□□□ -0.31
CTSA-206ENST00000480961 NDUFA6P56556 154 aa13.1□□□□□ -0.31
CTSA-206ENST00000480961 SPAG11BQ08648 103 aa13.1□□□□□ -0.31
CTSA-206ENST00000480961 SDIM1Q6ZPB5 146 aa13.1□□□□□ -0.31
CTSA-206ENST00000480961 ORAOV1Q8WV07 137 aa13.1□□□□□ -0.31
CTSA-206ENST00000480961 CHCHD1Q96BP2 118 aaKnown RBP13.1□□□□□ -0.31
CTSA-206ENST00000480961 A0A087WZ39 114 aa13.09□□□□□ -0.31
CTSA-206ENST00000480961 Q6ZSA8 131 aa13.09□□□□□ -0.31
CTSA-206ENST00000480961 ATP6V1G1O75348 118 aa13.08□□□□□ -0.32
CTSA-206ENST00000480961 PMVKQ15126 192 aa13.08□□□□□ -0.32
CTSA-206ENST00000480961 FAM19A2Q8N3H0 131 aa13.08□□□□□ -0.32
CTSA-206ENST00000480961 PANO1I0J062 215 aa13.07□□□□□ -0.32
CTSA-206ENST00000480961 SMR3BP02814 79 aaPredicted RBP13.07□□□□□ -0.32
CTSA-206ENST00000480961 SYCNQ0VAF6 134 aa13.07□□□□□ -0.32
CTSA-206ENST00000480961 FAM19A3Q7Z5A8 133 aa13.07□□□□□ -0.32
CTSA-206ENST00000480961 CARD19Q96LW7 228 aa13.07□□□□□ -0.32
CTSA-206ENST00000480961 GEMIN7Q9H840 131 aaKnown RBP13.07□□□□□ -0.32
CTSA-206ENST00000480961 HSBP1O75506 76 aa13.06□□□□□ -0.32
CTSA-206ENST00000480961 SERF1AO75920 110 aa13.06□□□□□ -0.32
CTSA-206ENST00000480961 LINC00310P59036 64 aa13.06□□□□□ -0.32
CTSA-206ENST00000480961 Q6ZRU5 148 aa13.06□□□□□ -0.32
CTSA-206ENST00000480961 OR10D4PQ8NGN7 298 aa13.06□□□□□ -0.32
CTSA-206ENST00000480961 CAMK2N2Q96S95 79 aa13.06□□□□□ -0.32
CTSA-206ENST00000480961 CDKN2A-AS1Q9UH64 79 aa13.06□□□□□ -0.32
CTSA-206ENST00000480961 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.06□□□□□ -0.32
CTSA-206ENST00000480961 ABCA13Q86UQ4 5058 aa13.05□□□□□ -0.32
CTSA-206ENST00000480961 NUPR1O60356 82 aa13.05□□□□□ -0.32
CTSA-206ENST00000480961 CHTF8P0CG12 524 aa13.05□□□□□ -0.32
CTSA-206ENST00000480961 HERVK_113P63121 156 aa13.05□□□□□ -0.32
CTSA-206ENST00000480961 ATP5LO75964 103 aa13.04□□□□□ -0.32
CTSA-206ENST00000480961 S100A1P23297 94 aa13.04□□□□□ -0.32
CTSA-206ENST00000480961 SEC11AP67812 179 aa13.04□□□□□ -0.32
CTSA-206ENST00000480961 SCXQ7RTU7 201 aa13.04□□□□□ -0.32
CTSA-206ENST00000480961 LINC00469Q8N7U9 141 aa13.04□□□□□ -0.32
CTSA-206ENST00000480961 TINCRA0A1B0GVN0 87 aa13.03□□□□□ -0.32
CTSA-206ENST00000480961 C2orf48Q96LS8 159 aa13.03□□□□□ -0.32
CTSA-206ENST00000480961 CHAC1Q9BUX1 264 aa13.03□□□□□ -0.32
CTSA-206ENST00000480961 CIRBP-AS1Q8TBR5 109 aa13.02□□□□□ -0.33
CTSA-206ENST00000480961 KIAA0087Q14695 138 aa13.01□□□□□ -0.33
CTSA-206ENST00000480961 C10orf25Q5T742 122 aa13.01□□□□□ -0.33
CTSA-206ENST00000480961 LINC01561Q8N1V8 128 aa13.01□□□□□ -0.33
CTSA-206ENST00000480961 DPH3Q96FX2 82 aa13.01□□□□□ -0.33
CTSA-206ENST00000480961 KRTAP4-5Q9BYR2 181 aa13.01□□□□□ -0.33
CTSA-206ENST00000480961 TOMM7Q9P0U1 55 aa13.01□□□□□ -0.33
CTSA-206ENST00000480961 IGKV2-24A0A0C4DH68 120 aa13□□□□□ -0.33
CTSA-206ENST00000480961 HIST1H2BKO60814 126 aa13□□□□□ -0.33
CTSA-206ENST00000480961 HIST1H2BJP06899 126 aa13□□□□□ -0.33
CTSA-206ENST00000480961 HIST1H2BOP23527 126 aa13□□□□□ -0.33
CTSA-206ENST00000480961 HIST1H2BBP33778 126 aa13□□□□□ -0.33
CTSA-206ENST00000480961 HIST1H2BDP58876 126 aa13□□□□□ -0.33
CTSA-206ENST00000480961 HIST1H2BCP62807 126 aa13□□□□□ -0.33
CTSA-206ENST00000480961 HIST2H2BEQ16778 126 aa13□□□□□ -0.33
CTSA-206ENST00000480961 HIST2H2BFQ5QNW6 126 aaPredicted RBP13□□□□□ -0.33
CTSA-206ENST00000480961 UNQ6190/PRO20217Q6UXQ8 127 aa13□□□□□ -0.33
CTSA-206ENST00000480961 Q8N1X5 172 aa13□□□□□ -0.33
CTSA-206ENST00000480961 HIST1H2BHQ93079 126 aa13□□□□□ -0.33
CTSA-206ENST00000480961 IFI27L1Q96BM0 104 aa13□□□□□ -0.33
CTSA-206ENST00000480961 HIST1H2BNQ99877 126 aa13□□□□□ -0.33
CTSA-206ENST00000480961 HIST1H2BMQ99879 126 aa13□□□□□ -0.33
CTSA-206ENST00000480961 C2orf82Q6UX34 121 aa12.99□□□□□ -0.33
CTSA-206ENST00000480961 PACRGQ96M98 296 aaPredicted RBP12.99□□□□□ -0.33
CTSA-206ENST00000480961 VPS13BQ7Z7G8 4022 aa12.99□□□□□ -0.33
CTSA-206ENST00000480961 IGLV5-45A0A087WSX0 123 aa12.97□□□□□ -0.33
CTSA-206ENST00000480961 A0A096LNI7 61 aa12.97□□□□□ -0.33
CTSA-206ENST00000480961 NDUFA1O15239 70 aa12.97□□□□□ -0.33
CTSA-206ENST00000480961 SPINK8P0C7L1 97 aa12.97□□□□□ -0.33
CTSA-206ENST00000480961 IGLC3P0DOY3 106 aa12.97□□□□□ -0.33
CTSA-206ENST00000480961 PCLOQ9Y6V0 5065 aa12.97□□□□□ -0.33
CTSA-206ENST00000480961 SMIM1B2RUZ4 78 aa12.96□□□□□ -0.33
CTSA-206ENST00000480961 PRSS2P07478 247 aa12.96□□□□□ -0.33
CTSA-206ENST00000480961 FABP4P15090 132 aa12.96□□□□□ -0.33
CTSA-206ENST00000480961 MAJINQ3KP22 176 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms