RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 VAMP8Q9BV40 100 aa8.5□□□□□ -1.05
SIK3-209ENST00000480222 PLECQ15149 4684 aaKnown RBP8.49□□□□□ -1.05
SIK3-209ENST00000480222 TRAV8-3A0A0A6YYJ7 113 aa8.49□□□□□ -1.05
SIK3-209ENST00000480222 HERVK_113P61574 105 aa8.49□□□□□ -1.05
SIK3-209ENST00000480222 TMEM170BQ5T4T1 132 aa8.49□□□□□ -1.05
SIK3-209ENST00000480222 LINC00469Q8N7U9 141 aa8.49□□□□□ -1.05
SIK3-209ENST00000480222 CD164L2Q6UWJ8 174 aa8.48□□□□□ -1.05
SIK3-209ENST00000480222 CHCHD10Q8WYQ3 142 aaPredicted RBP8.48□□□□□ -1.05
SIK3-209ENST00000480222 RMI2Q96E14 147 aa8.48□□□□□ -1.05
SIK3-209ENST00000480222 C12orf57Q99622 126 aa8.48□□□□□ -1.05
SIK3-209ENST00000480222 IGHV3OR16-9A0A0B4J2B5 98 aa8.47□□□□□ -1.05
SIK3-209ENST00000480222 XCL1P47992 114 aa8.47□□□□□ -1.05
SIK3-209ENST00000480222 CDPF1Q6NVV7 123 aa8.47□□□□□ -1.05
SIK3-209ENST00000480222 LINC00518Q8N0U6 118 aa8.47□□□□□ -1.05
SIK3-209ENST00000480222 LINC01561Q8N1V8 128 aa8.47□□□□□ -1.05
SIK3-209ENST00000480222 C1orf43Q9BWL3 253 aa8.47□□□□□ -1.05
SIK3-209ENST00000480222 SACSQ9NZJ4 4579 aa8.47□□□□□ -1.05
SIK3-209ENST00000480222 LYSTQ99698 3801 aa8.46□□□□□ -1.05
SIK3-209ENST00000480222 IGLV10-54A0A075B6I4 117 aa8.46□□□□□ -1.06
SIK3-209ENST00000480222 A0A087WZ39 114 aa8.46□□□□□ -1.06
SIK3-209ENST00000480222 hDV102S1A0JD36 115 aa8.46□□□□□ -1.06
SIK3-209ENST00000480222 TMEM223A0PJW6 202 aa8.46□□□□□ -1.06
SIK3-209ENST00000480222 COX6A2Q02221 97 aa8.46□□□□□ -1.06
SIK3-209ENST00000480222 LINC00476Q8WZB0 136 aa8.46□□□□□ -1.06
SIK3-209ENST00000480222 CDKN2A-AS1Q9UH64 79 aa8.46□□□□□ -1.06
SIK3-209ENST00000480222 NBDYA0A0U1RRE5 68 aa8.45□□□□□ -1.06
SIK3-209ENST00000480222 E9PLD3 99 aa8.45□□□□□ -1.06
SIK3-209ENST00000480222 SPATA45Q537H7 98 aa8.45□□□□□ -1.06
SIK3-209ENST00000480222 PAM16Q9Y3D7 125 aa8.45□□□□□ -1.06
SIK3-209ENST00000480222 COX11Q9Y6N1 276 aa8.45□□□□□ -1.06
SIK3-209ENST00000480222 COX7A2LO14548 114 aa8.44□□□□□ -1.06
SIK3-209ENST00000480222 FOXI1Q12951 378 aa8.44□□□□□ -1.06
SIK3-209ENST00000480222 STPG4Q8N801 248 aa8.44□□□□□ -1.06
SIK3-209ENST00000480222 KRTAP1-5Q9BYS1 174 aa8.44□□□□□ -1.06
SIK3-209ENST00000480222 ALMS1Q8TCU4 4167 aa8.44□□□□□ -1.06
SIK3-209ENST00000480222 TENM2Q9NT68 2774 aa8.44□□□□□ -1.06
SIK3-209ENST00000480222 IGKV2D-24A0A075B6R9 120 aa8.43□□□□□ -1.06
SIK3-209ENST00000480222 IGHV1-58A0A0C4DH39 117 aa8.43□□□□□ -1.06
SIK3-209ENST00000480222 GAGE12HA6NDE8 117 aa8.43□□□□□ -1.06
SIK3-209ENST00000480222 SMIM1B2RUZ4 78 aa8.43□□□□□ -1.06
SIK3-209ENST00000480222 MAJINQ3KP22 176 aa8.43□□□□□ -1.06
SIK3-209ENST00000480222 ANKRD39Q53RE8 183 aa8.43□□□□□ -1.06
SIK3-209ENST00000480222 Q9HAA7 133 aa8.43□□□□□ -1.06
SIK3-209ENST00000480222 DNAH1Q9P2D7 4330 aa8.43□□□□□ -1.06
SIK3-209ENST00000480222 IGLV5-39A0A0G2JS06 123 aa8.42□□□□□ -1.06
SIK3-209ENST00000480222 APOMO95445 188 aa8.42□□□□□ -1.06
SIK3-209ENST00000480222 SPINK8P0C7L1 97 aa8.42□□□□□ -1.06
SIK3-209ENST00000480222 MALP21145 153 aa8.42□□□□□ -1.06
SIK3-209ENST00000480222 PLEKHB2Q96CS7 222 aa8.42□□□□□ -1.06
SIK3-209ENST00000480222 TM2D2Q9BX73 214 aa8.42□□□□□ -1.06
SIK3-209ENST00000480222 LEPROTO15243 131 aa8.41□□□□□ -1.06
SIK3-209ENST00000480222 LY6G6CO95867 125 aa8.41□□□□□ -1.06
SIK3-209ENST00000480222 NMUP48645 174 aa8.41□□□□□ -1.06
SIK3-209ENST00000480222 KRTAP26-1Q6PEX3 210 aa8.41□□□□□ -1.06
SIK3-209ENST00000480222 C5orf38Q86SI9 138 aa8.41□□□□□ -1.06
SIK3-209ENST00000480222 VPS13DQ5THJ4 4388 aa8.4□□□□□ -1.06
SIK3-209ENST00000480222 IGHV3-64A0A075B6Q5 118 aa8.39□□□□□ -1.07
SIK3-209ENST00000480222 IGKV2D-26A0A0A0MRZ7 120 aa8.39□□□□□ -1.07
SIK3-209ENST00000480222 J3QQQ9 107 aa8.39□□□□□ -1.07
SIK3-209ENST00000480222 LGALS3P17931 250 aaKnown RBP8.39□□□□□ -1.07
SIK3-209ENST00000480222 SFTA2Q6UW10 78 aa8.39□□□□□ -1.07
SIK3-209ENST00000480222 Q6ZR54 194 aa8.39□□□□□ -1.07
SIK3-209ENST00000480222 TSTD3H0UI37 97 aa8.38□□□□□ -1.07
SIK3-209ENST00000480222 COX8AP10176 69 aa8.38□□□□□ -1.07
SIK3-209ENST00000480222 Q8IZM0 81 aa8.38□□□□□ -1.07
SIK3-209ENST00000480222 DNAH6Q9C0G6 4158 aa8.38□□□□□ -1.07
SIK3-209ENST00000480222 DLEU1O43261 78 aa8.37□□□□□ -1.07
SIK3-209ENST00000480222 CXCL5P42830 114 aa8.37□□□□□ -1.07
SIK3-209ENST00000480222 TSPEAR-AS2P59090 65 aa8.37□□□□□ -1.07
SIK3-209ENST00000480222 CFAP161Q6P656 301 aa8.37□□□□□ -1.07
SIK3-209ENST00000480222 COX7B2Q8TF08 81 aa8.37□□□□□ -1.07
SIK3-209ENST00000480222 ORAOV1Q8WV07 137 aa8.37□□□□□ -1.07
SIK3-209ENST00000480222 PRSS2P07478 247 aa8.36□□□□□ -1.07
SIK3-209ENST00000480222 SPAG11BQ08648 103 aa8.36□□□□□ -1.07
SIK3-209ENST00000480222 SLC25A34Q6PIV7 304 aa8.36□□□□□ -1.07
SIK3-209ENST00000480222 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
SIK3-209ENST00000480222 UQCR10Q9UDW1 63 aa8.36□□□□□ -1.07
SIK3-209ENST00000480222 GVQW2A0A096LPI5 108 aaPredicted RBP8.35□□□□□ -1.07
SIK3-209ENST00000480222 ZNF815PA8K554 130 aa8.35□□□□□ -1.07
SIK3-209ENST00000480222 NDUFA1O15239 70 aa8.35□□□□□ -1.07
SIK3-209ENST00000480222 PSCAO43653 123 aa8.35□□□□□ -1.07
SIK3-209ENST00000480222 PCP2Q8IVA1 136 aa8.35□□□□□ -1.07
SIK3-209ENST00000480222 C6orf223Q8N319 242 aa8.35□□□□□ -1.07
SIK3-209ENST00000480222 TOMM7Q9P0U1 55 aa8.35□□□□□ -1.07
SIK3-209ENST00000480222 NDUFA12Q9UI09 145 aa8.35□□□□□ -1.07
SIK3-209ENST00000480222 HYDINQ4G0P3 5121 aa8.34□□□□□ -1.07
SIK3-209ENST00000480222 MYMXA0A1B0GTQ4 84 aa8.34□□□□□ -1.07
SIK3-209ENST00000480222 F8WDY8 70 aa8.34□□□□□ -1.07
SIK3-209ENST00000480222 Q6ZRN7 208 aaPredicted RBP8.34□□□□□ -1.07
SIK3-209ENST00000480222 C15orf56Q8N910 161 aa8.34□□□□□ -1.07
SIK3-209ENST00000480222 C14orf144Q96I85 54 aa8.34□□□□□ -1.07
SIK3-209ENST00000480222 LCE6AA0A183 80 aa8.33□□□□□ -1.08
SIK3-209ENST00000480222 M0R2N4 97 aa8.33□□□□□ -1.08
SIK3-209ENST00000480222 HERV-K104P63124 156 aa8.33□□□□□ -1.08
SIK3-209ENST00000480222 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
SIK3-209ENST00000480222 ZNF625Q96I27 306 aaPredicted RBP8.33□□□□□ -1.08
SIK3-209ENST00000480222 PRO1933Q9H354 126 aa8.33□□□□□ -1.08
SIK3-209ENST00000480222 USP17L23D6RBM5 183 aa8.32□□□□□ -1.08
SIK3-209ENST00000480222 ZNF561-AS1K7EIQ3 104 aa8.32□□□□□ -1.08
SIK3-209ENST00000480222 CKS1BP61024 79 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms