RNA–Protein interactions for RNA: ENST00000480181.1

CLIC3-202, Transcript of chloride intracellular channel 3, humanhuman

TSL 3

Gene CLIC3, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-202ENST00000480181 FOXI1Q12951 378 aa13.08□□□□□ -0.32
CLIC3-202ENST00000480181 TMEM18Q96B42 140 aa13.08□□□□□ -0.32
CLIC3-202ENST00000480181 LINC01600Q96MT4 127 aa13.08□□□□□ -0.32
CLIC3-202ENST00000480181 SPANXA1Q9NS26 97 aa13.08□□□□□ -0.32
CLIC3-202ENST00000480181 LRP2P98164 4655 aa13.07□□□□□ -0.32
CLIC3-202ENST00000480181 MRPS36P82909 103 aaKnown RBP13.07□□□□□ -0.32
CLIC3-202ENST00000480181 RNASE13Q5GAN3 156 aaKnown RBP13.07□□□□□ -0.32
CLIC3-202ENST00000480181 C15orf56Q8N910 161 aa13.07□□□□□ -0.32
CLIC3-202ENST00000480181 MRPL18Q9H0U6 180 aaKnown RBP13.07□□□□□ -0.32
CLIC3-202ENST00000480181 K7EMI3 77 aa13.06□□□□□ -0.32
CLIC3-202ENST00000480181 RAB5AP20339 215 aa13.06□□□□□ -0.32
CLIC3-202ENST00000480181 IFI27P40305 119 aaPredicted RBP13.06□□□□□ -0.32
CLIC3-202ENST00000480181 COX6A2Q02221 97 aa13.06□□□□□ -0.32
CLIC3-202ENST00000480181 MAJINQ3KP22 176 aa13.06□□□□□ -0.32
CLIC3-202ENST00000480181 NXT2Q9NPJ8 142 aaKnown RBP13.06□□□□□ -0.32
CLIC3-202ENST00000480181 PYGO1Q9Y3Y4 419 aa13.06□□□□□ -0.32
CLIC3-202ENST00000480181 LINC01546A6NGU7 62 aa13.05□□□□□ -0.32
CLIC3-202ENST00000480181 CCL25O15444 150 aa13.05□□□□□ -0.32
CLIC3-202ENST00000480181 OPRPNQ99935 248 aaPredicted RBP13.05□□□□□ -0.32
CLIC3-202ENST00000480181 LINC00474Q9P2X8 69 aa13.05□□□□□ -0.32
CLIC3-202ENST00000480181 XCL1P47992 114 aa13.03□□□□□ -0.32
CLIC3-202ENST00000480181 PRR3P79522 188 aaKnown RBP13.03□□□□□ -0.32
CLIC3-202ENST00000480181 FABP9Q0Z7S8 132 aa13.03□□□□□ -0.32
CLIC3-202ENST00000480181 IGLV4-3A0A075B6K6 122 aa13.02□□□□□ -0.33
CLIC3-202ENST00000480181 ORMDL2Q53FV1 153 aa13.02□□□□□ -0.33
CLIC3-202ENST00000480181 REG3GQ6UW15 175 aa13.02□□□□□ -0.33
CLIC3-202ENST00000480181 CD164L2Q6UWJ8 174 aa13.02□□□□□ -0.33
CLIC3-202ENST00000480181 STPG4Q8N801 248 aa13.02□□□□□ -0.33
CLIC3-202ENST00000480181 IGKV2-24A0A0C4DH68 120 aa13.01□□□□□ -0.33
CLIC3-202ENST00000480181 SS18Q15532 418 aa13.01□□□□□ -0.33
CLIC3-202ENST00000480181 C2orf66Q6UXQ4 117 aa13.01□□□□□ -0.33
CLIC3-202ENST00000480181 CBLN2Q8IUK8 224 aa13.01□□□□□ -0.33
CLIC3-202ENST00000480181 CYSLTR1Q9Y271 337 aa13.01□□□□□ -0.33
CLIC3-202ENST00000480181 GVQW2A0A096LPI5 108 aaPredicted RBP13□□□□□ -0.33
CLIC3-202ENST00000480181 IGIPA6NJ69 53 aa13□□□□□ -0.33
CLIC3-202ENST00000480181 C1orf196B1AJZ1 125 aa13□□□□□ -0.33
CLIC3-202ENST00000480181 SPINK6Q6UWN8 80 aa13□□□□□ -0.33
CLIC3-202ENST00000480181 PRSS3P2Q8NHM4 247 aa13□□□□□ -0.33
CLIC3-202ENST00000480181 RNF213Q63HN8 5207 aa13□□□□□ -0.33
CLIC3-202ENST00000480181 TRAV13-1A0A0B4J241 112 aa12.99□□□□□ -0.33
CLIC3-202ENST00000480181 A0A0J9YXV3 536 aa12.99□□□□□ -0.33
CLIC3-202ENST00000480181 HIGD2BQ4VC39 106 aa12.99□□□□□ -0.33
CLIC3-202ENST00000480181 LINC00173Q6ZV60 143 aa12.99□□□□□ -0.33
CLIC3-202ENST00000480181 TRAPPC1Q9Y5R8 145 aa12.99□□□□□ -0.33
CLIC3-202ENST00000480181 URB1-AS1Q96HZ7 61 aa12.98□□□□□ -0.33
CLIC3-202ENST00000480181 SMCO4Q9NRQ5 59 aa12.98□□□□□ -0.33
CLIC3-202ENST00000480181 NPSP0C0P6 89 aa12.97□□□□□ -0.33
CLIC3-202ENST00000480181 C18orf32Q8TCD1 76 aa12.97□□□□□ -0.33
CLIC3-202ENST00000480181 TOMM6Q96B49 74 aa12.96□□□□□ -0.33
CLIC3-202ENST00000480181 TMEM141Q96I45 108 aa12.96□□□□□ -0.33
CLIC3-202ENST00000480181 AMELXQ99217 191 aa12.96□□□□□ -0.33
CLIC3-202ENST00000480181 IGHV3OR16-9A0A0B4J2B5 98 aa12.95□□□□□ -0.34
CLIC3-202ENST00000480181 IGHV1-58A0A0C4DH39 117 aa12.94□□□□□ -0.34
CLIC3-202ENST00000480181 IFITM10A6NMD0 228 aa12.94□□□□□ -0.34
CLIC3-202ENST00000480181 ZC2HC1BQ5TFG8 222 aa12.94□□□□□ -0.34
CLIC3-202ENST00000480181 TIMM17AQ99595 171 aa12.94□□□□□ -0.34
CLIC3-202ENST00000480181 A0A096LNI7 61 aa12.93□□□□□ -0.34
CLIC3-202ENST00000480181 A0A096LNJ9 63 aa12.93□□□□□ -0.34
CLIC3-202ENST00000480181 KRTAP10-8P60410 259 aa12.93□□□□□ -0.34
CLIC3-202ENST00000480181 Q6ZRP5 223 aa12.93□□□□□ -0.34
CLIC3-202ENST00000480181 COX7A2LO14548 114 aa12.92□□□□□ -0.34
CLIC3-202ENST00000480181 UBE2D1P51668 147 aa12.92□□□□□ -0.34
CLIC3-202ENST00000480181 LINC00242Q5T6M2 205 aa12.92□□□□□ -0.34
CLIC3-202ENST00000480181 G0S2P27469 103 aa12.91□□□□□ -0.34
CLIC3-202ENST00000480181 TEX43Q6ZNM6 134 aa12.9□□□□□ -0.34
CLIC3-202ENST00000480181 FA2HQ7L5A8 372 aa12.9□□□□□ -0.34
CLIC3-202ENST00000480181 ERASQ7Z444 233 aa12.9□□□□□ -0.34
CLIC3-202ENST00000480181 FAM19A3Q7Z5A8 133 aa12.9□□□□□ -0.34
CLIC3-202ENST00000480181 C5orf38Q86SI9 138 aa12.9□□□□□ -0.34
CLIC3-202ENST00000480181 CARD19Q96LW7 228 aa12.9□□□□□ -0.34
CLIC3-202ENST00000480181 LINC00526Q96FQ7 95 aa12.89□□□□□ -0.35
CLIC3-202ENST00000480181 COLCA2A8K830 154 aa12.88□□□□□ -0.35
CLIC3-202ENST00000480181 ZNF561-AS1K7EIQ3 104 aa12.88□□□□□ -0.35
CLIC3-202ENST00000480181 LINC01549A6NIU2 74 aa12.87□□□□□ -0.35
CLIC3-202ENST00000480181 SRSF9Q13242 221 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLIC3-202ENST00000480181 Q6ZN92 141 aa12.87□□□□□ -0.35
CLIC3-202ENST00000480181 VCX2Q9H322 139 aa12.87□□□□□ -0.35
CLIC3-202ENST00000480181 LINC00614P0C842 121 aa12.86□□□□□ -0.35
CLIC3-202ENST00000480181 SCGB3A1Q96QR1 104 aa12.86□□□□□ -0.35
CLIC3-202ENST00000480181 A0A087WZ39 114 aa12.85□□□□□ -0.35
CLIC3-202ENST00000480181 SYCNQ0VAF6 134 aa12.85□□□□□ -0.35
CLIC3-202ENST00000480181 C2orf88Q9BSF0 95 aa12.85□□□□□ -0.35
CLIC3-202ENST00000480181 MALP21145 153 aa12.84□□□□□ -0.35
CLIC3-202ENST00000480181 PAPPA-AS1Q5QFB9 102 aa12.84□□□□□ -0.35
CLIC3-202ENST00000480181 IGLV4-69A0A075B6H9 119 aa12.83□□□□□ -0.36
CLIC3-202ENST00000480181 TRGC2P03986 189 aa12.83□□□□□ -0.36
CLIC3-202ENST00000480181 OR10D4PQ8NGN7 298 aa12.83□□□□□ -0.36
CLIC3-202ENST00000480181 LOC107984640A0A0U1RRK4 108 aa12.82□□□□□ -0.36
CLIC3-202ENST00000480181 PTTG1IPP53801 180 aa12.82□□□□□ -0.36
CLIC3-202ENST00000480181 PDZD11Q5EBL8 140 aa12.82□□□□□ -0.36
CLIC3-202ENST00000480181 LINC01561Q8N1V8 128 aa12.82□□□□□ -0.36
CLIC3-202ENST00000480181 C2orf48Q96LS8 159 aa12.82□□□□□ -0.36
CLIC3-202ENST00000480181 SCO1O75880 301 aa12.81□□□□□ -0.36
CLIC3-202ENST00000480181 APOMO95445 188 aa12.81□□□□□ -0.36
CLIC3-202ENST00000480181 HBDP02042 147 aa12.81□□□□□ -0.36
CLIC3-202ENST00000480181 SPAG11BQ08648 103 aa12.81□□□□□ -0.36
CLIC3-202ENST00000480181 KIAA0087Q14695 138 aa12.81□□□□□ -0.36
CLIC3-202ENST00000480181 RAB5BP61020 215 aa12.8□□□□□ -0.36
CLIC3-202ENST00000480181 ODF1Q14990 250 aa12.8□□□□□ -0.36
CLIC3-202ENST00000480181 PMCHL1Q16048 86 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms