RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 BAALCQ8WXS3 180 aa4.34□□□□□ -1.72
HERC4-210ENST00000480158 A0A1B0GV90 55 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 TRIAP1O43715 76 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 ATP5LO75964 103 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 CRPP02741 224 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 LBHQ53QV2 105 aaPredicted RBP4.33□□□□□ -1.72
HERC4-210ENST00000480158 ENHOQ6UWT2 76 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 TEX43Q6ZNM6 134 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 TIMM17AQ99595 171 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 HSPB8Q9UJY1 196 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 PYGO1Q9Y3Y4 419 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 TRAV9-2A0A087WT02 112 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 NBDYA0A0U1RRE5 68 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 XCL1P47992 114 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 SMAGPQ0VAQ4 97 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 PACRGQ96M98 296 aaPredicted RBP4.33□□□□□ -1.72
HERC4-210ENST00000480158 TIMM21Q9BVV7 248 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 CSDC2Q9Y534 153 aaKnown RBP4.33□□□□□ -1.72
HERC4-210ENST00000480158 DNAH1Q9P2D7 4330 aa4.33□□□□□ -1.72
HERC4-210ENST00000480158 C3orf79P0CE67 100 aa4.32□□□□□ -1.72
HERC4-210ENST00000480158 PKIAP61925 76 aa4.32□□□□□ -1.72
HERC4-210ENST00000480158 OR10D4PQ8NGN7 298 aa4.32□□□□□ -1.72
HERC4-210ENST00000480158 MAP1LC3CQ9BXW4 147 aa4.32□□□□□ -1.72
HERC4-210ENST00000480158 CST9LQ9H4G1 147 aa4.32□□□□□ -1.72
HERC4-210ENST00000480158 IGKV2D-24A0A075B6R9 120 aa4.32□□□□□ -1.72
HERC4-210ENST00000480158 A0A0J9YXV3 536 aa4.32□□□□□ -1.72
HERC4-210ENST00000480158 LINC00959A0A1B0GUT2 108 aa4.32□□□□□ -1.72
HERC4-210ENST00000480158 MRPS36P82909 103 aaKnown RBP4.32□□□□□ -1.72
HERC4-210ENST00000480158 PMVKQ15126 192 aa4.32□□□□□ -1.72
HERC4-210ENST00000480158 SPATA12Q7Z6I5 190 aa4.32□□□□□ -1.72
HERC4-210ENST00000480158 C2orf88Q9BSF0 95 aa4.32□□□□□ -1.72
HERC4-210ENST00000480158 IBA57-AS1B1ANH7 110 aa4.31□□□□□ -1.72
HERC4-210ENST00000480158 CCL25O15444 150 aa4.31□□□□□ -1.72
HERC4-210ENST00000480158 PAPPA-AS1Q5QFB9 102 aa4.31□□□□□ -1.72
HERC4-210ENST00000480158 AMELXQ99217 191 aa4.31□□□□□ -1.72
HERC4-210ENST00000480158 LINC01549A6NIU2 74 aa4.31□□□□□ -1.72
HERC4-210ENST00000480158 SYS1-DBNDD2H3BUS1 97 aa4.31□□□□□ -1.72
HERC4-210ENST00000480158 COX6A2Q02221 97 aa4.31□□□□□ -1.72
HERC4-210ENST00000480158 SS18Q15532 418 aa4.31□□□□□ -1.72
HERC4-210ENST00000480158 C10orf126Q8N4M7 172 aa4.31□□□□□ -1.72
HERC4-210ENST00000480158 CHCHD10Q8WYQ3 142 aaPredicted RBP4.31□□□□□ -1.72
HERC4-210ENST00000480158 PRR34Q9NV39 138 aa4.31□□□□□ -1.72
HERC4-210ENST00000480158 MRPL35Q9NZE8 188 aaKnown RBP4.31□□□□□ -1.72
HERC4-210ENST00000480158 CHTOPQ9Y3Y2 248 aaKnown RBP4.31□□□□□ -1.72
HERC4-210ENST00000480158 KMT2AQ03164 3969 aa4.31□□□□□ -1.72
HERC4-210ENST00000480158 KMT2CQ8NEZ4 4911 aaKnown RBP4.31□□□□□ -1.72
HERC4-210ENST00000480158 HYDINQ4G0P3 5121 aa4.3□□□□□ -1.72
HERC4-210ENST00000480158 UBE2D1P51668 147 aa4.3□□□□□ -1.72
HERC4-210ENST00000480158 LINC00242Q5T6M2 205 aa4.3□□□□□ -1.72
HERC4-210ENST00000480158 ATOH7Q8N100 152 aa4.3□□□□□ -1.72
HERC4-210ENST00000480158 C14orf144Q96I85 54 aa4.3□□□□□ -1.72
HERC4-210ENST00000480158 TRAV8-3A0A0A6YYJ7 113 aa4.3□□□□□ -1.72
HERC4-210ENST00000480158 LCE6AA0A183 80 aa4.3□□□□□ -1.72
HERC4-210ENST00000480158 GAGE12HA6NDE8 117 aa4.3□□□□□ -1.72
HERC4-210ENST00000480158 LECT2O14960 151 aa4.3□□□□□ -1.72
HERC4-210ENST00000480158 MIAQ16674 131 aa4.3□□□□□ -1.72
HERC4-210ENST00000480158 TTC32Q5I0X7 151 aa4.3□□□□□ -1.72
HERC4-210ENST00000480158 C5orf38Q86SI9 138 aa4.3□□□□□ -1.72
HERC4-210ENST00000480158 GEMIN7Q9H840 131 aaKnown RBP4.3□□□□□ -1.72
HERC4-210ENST00000480158 IGHV3-64A0A075B6Q5 118 aa4.29□□□□□ -1.72
HERC4-210ENST00000480158 PSCAO43653 123 aa4.29□□□□□ -1.72
HERC4-210ENST00000480158 CHAC1Q9BUX1 264 aa4.29□□□□□ -1.72
HERC4-210ENST00000480158 IGLV4-69A0A075B6H9 119 aa4.29□□□□□ -1.72
HERC4-210ENST00000480158 C11orf86A6NJI1 115 aa4.29□□□□□ -1.72
HERC4-210ENST00000480158 TMEM170BQ5T4T1 132 aa4.29□□□□□ -1.72
HERC4-210ENST00000480158 Q6ZR54 194 aa4.29□□□□□ -1.72
HERC4-210ENST00000480158 MAPKAPK5-AS1Q8N8E1 139 aa4.29□□□□□ -1.72
HERC4-210ENST00000480158 KRTAP4-9Q9BYQ8 210 aa4.29□□□□□ -1.72
HERC4-210ENST00000480158 CDKN2A-AS1Q9UH64 79 aa4.29□□□□□ -1.72
HERC4-210ENST00000480158 TRAV12-1A0A0B4J245 112 aa4.28□□□□□ -1.72
HERC4-210ENST00000480158 F8VRH5 84 aa4.28□□□□□ -1.72
HERC4-210ENST00000480158 NPSP0C0P6 89 aa4.28□□□□□ -1.72
HERC4-210ENST00000480158 TRAV8-4A0A0B4J246 113 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 K7EP13 123 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 C1orf134Q5TEV5 83 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 CD164L2Q6UWJ8 174 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 PET117Q6UWS5 81 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 C6orf223Q8N319 242 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 VPS13DQ5THJ4 4388 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 TINCRA0A1B0GVN0 87 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 DPM2O94777 84 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 IGKCP01834 107 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 SPINK8P0C7L1 97 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 FOXI1Q12951 378 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 LINC01545Q5VT33 79 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 STPG4Q8N801 248 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 LINC00526Q96FQ7 95 aa4.27□□□□□ -1.73
HERC4-210ENST00000480158 IGHV3OR16-9A0A0B4J2B5 98 aa4.26□□□□□ -1.73
HERC4-210ENST00000480158 C20orf202A1L168 122 aa4.26□□□□□ -1.73
HERC4-210ENST00000480158 COX7A2LO14548 114 aa4.26□□□□□ -1.73
HERC4-210ENST00000480158 IGLC3P0DOY3 106 aa4.26□□□□□ -1.73
HERC4-210ENST00000480158 HERVK_113P63121 156 aa4.26□□□□□ -1.73
HERC4-210ENST00000480158 MAJINQ3KP22 176 aa4.26□□□□□ -1.73
HERC4-210ENST00000480158 KRTAP26-1Q6PEX3 210 aa4.26□□□□□ -1.73
HERC4-210ENST00000480158 RMI2Q96E14 147 aa4.26□□□□□ -1.73
HERC4-210ENST00000480158 DNAH10Q8IVF4 4471 aa4.26□□□□□ -1.73
HERC4-210ENST00000480158 ZNF22P17026 224 aaPredicted RBP4.26□□□□□ -1.73
HERC4-210ENST00000480158 PLNP26678 52 aa4.26□□□□□ -1.73
HERC4-210ENST00000480158 SEC11AP67812 179 aa4.26□□□□□ -1.73
HERC4-210ENST00000480158 WFDC2Q14508 124 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms