RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 ZNF492Q9P255 531 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 CYSLTR1Q9Y271 337 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 KLF12Q9Y4X4 402 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 V9GYV3 84 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 FBN2P35556 2912 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 SORL1Q92673 2214 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 F8P00451 2351 aa0.82□□□□□ -2.28
SRRM1-211ENST00000478890 FCGBPQ9Y6R7 5405 aaPredicted RBP0.82□□□□□ -2.28
SRRM1-211ENST00000478890 COL12A1Q99715 3063 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 PKD1L1Q8TDX9 2849 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 NACAE9PAV3 2078 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.81□□□□□ -2.28
SRRM1-211ENST00000478890 A0A096LNJ9 63 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 TRAV2A0A0B4J234 112 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 IGHV1-24A0A0C4DH33 117 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 IGKV2-29A2NJV5 120 aaPredicted RBP0.81□□□□□ -2.28
SRRM1-211ENST00000478890 SDHAF1A6NFY7 115 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 ZNF815PA8K554 130 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 A8MWV9 139 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 LINC00587B1AMM8 73 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 H3BMM0 161 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 SYS1-DBNDD2H3BUS1 97 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 I3L3M4 83 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 LGALS9O00182 355 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 PSCAO43653 123 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 NPYP01303 97 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 IGKCP01834 107 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 CRPP02741 224 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 ANGP03950 147 aaKnown RBP0.81□□□□□ -2.28
SRRM1-211ENST00000478890 PRM2P04554 102 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 C3orf79P0CE67 100 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 SPART-AS1P0CW21 52 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 SMIM13P0DJ93 91 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 P0DMU3 169 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 FAM231AP0DMU4 169 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 FAM231CP0DMU5 169 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 IGLC2P0DOY2 106 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 HLA-DRB4P13762 266 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 PSMB8P28062 276 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 PFN2P35080 140 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 INSL3P51460 131 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 ZNF80P51504 273 aaPredicted RBP0.81□□□□□ -2.28
SRRM1-211ENST00000478890 LINC00158P58513 81 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 CKS1BP61024 79 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 NPC2P61916 151 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 Q0VG73 95 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 SS18Q15532 418 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 TAL2Q16559 108 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 DEFB135Q30KP9 77 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 DEFB116Q30KQ4 102 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 MPV17L2Q567V2 206 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 RNASE13Q5GAN3 156 aaKnown RBP0.81□□□□□ -2.28
SRRM1-211ENST00000478890 MEIG1Q5JSS6 88 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 GDF5OSQ5U4N7 250 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 MORN3Q6PF18 240 aaPredicted RBP0.81□□□□□ -2.28
SRRM1-211ENST00000478890 SFTA2Q6UW10 78 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 CLPSL2Q6UWE3 100 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 LINC00322Q6ZN03 302 aaPredicted RBP0.81□□□□□ -2.28
SRRM1-211ENST00000478890 FAM231DQ6ZW35 169 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 PCP2Q8IVA1 136 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 Q8N8P6 123 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 ATP6V0E2Q8NHE4 81 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 ZNRF2Q8NHG8 242 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 C18orf32Q8TCD1 76 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 PLEKHB2Q96CS7 222 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 RPL39LQ96EH5 51 aaKnown RBP0.81□□□□□ -2.28
SRRM1-211ENST00000478890 ZNF625Q96I27 306 aaPredicted RBP0.81□□□□□ -2.28
SRRM1-211ENST00000478890 CAMK2N2Q96S95 79 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 TIMM21Q9BVV7 248 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 SMIM2Q9BVW6 85 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 WFDC10AQ9H1F0 79 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 UQCR10Q9UDW1 63 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 HHLA3Q9XRX5 114 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 TP53TG1Q9Y2A0 90 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 LENEPQ9Y5L5 61 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 HLA-DRB4X5D2U9 266 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 LAMA3Q16787 3333 aa0.81□□□□□ -2.28
SRRM1-211ENST00000478890 VWFP04275 2813 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 ADGRG4Q8IZF6 3080 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 KMT2BQ9UMN6 2715 aaPredicted RBP0.8□□□□□ -2.28
SRRM1-211ENST00000478890 IGLV4-69A0A075B6H9 119 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 IGLV10-54A0A075B6I4 117 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 IGLV2-33A0A075B6J2 118 aaPredicted RBP0.8□□□□□ -2.28
SRRM1-211ENST00000478890 TRBV25-1A0A075B6N4 114 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 TRAV8-2A0A0B4J237 113 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 TRAV8-4A0A0B4J246 113 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 A0A0J9YXV3 536 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 TRBV6-1A0A0K0K1D8 114 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 MYMXA0A1B0GTQ4 84 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 A0A1B0GV90 55 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 FAM240AA0A1B0GVK7 77 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 C19orf71A6NCJ1 209 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 LRCOL1A6NCL2 159 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 LINC01549A6NIU2 74 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 IGLL5B9A064 214 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 NUPR1O60356 82 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 NDUFS6O75380 124 aaKnown RBP0.8□□□□□ -2.28
SRRM1-211ENST00000478890 APOMO95445 188 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 OXTP01178 125 aa0.8□□□□□ -2.28
SRRM1-211ENST00000478890 IGLV2-8P01709 118 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms