RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 A0A1B0GUV1 79 aa4.05□□□□□ -1.76
USF3-202ENST00000478658 LOC101927531A0A1B0GV80 90 aa4.05□□□□□ -1.76
USF3-202ENST00000478658 HRES1P13985 223 aa4.05□□□□□ -1.76
USF3-202ENST00000478658 LYPD2Q6UXB3 125 aa4.05□□□□□ -1.76
USF3-202ENST00000478658 RPL39LQ96EH5 51 aaKnown RBP4.05□□□□□ -1.76
USF3-202ENST00000478658 LTBP1Q14766 1721 aa4.05□□□□□ -1.76
USF3-202ENST00000478658 LINC01547P58512 204 aaPredicted RBP4.05□□□□□ -1.76
USF3-202ENST00000478658 C15orf65H3BRN8 121 aa4.05□□□□□ -1.76
USF3-202ENST00000478658 KPRPQ5T749 579 aaPredicted RBP4.05□□□□□ -1.76
USF3-202ENST00000478658 J3QL48 77 aa4.04□□□□□ -1.76
USF3-202ENST00000478658 HRCT1Q6UXD1 115 aa4.04□□□□□ -1.76
USF3-202ENST00000478658 ZNRD1Q9P1U0 126 aa4.04□□□□□ -1.76
USF3-202ENST00000478658 MSMPQ1L6U9 139 aa4.04□□□□□ -1.76
USF3-202ENST00000478658 C17orf58Q2M2W7 97 aa4.04□□□□□ -1.76
USF3-202ENST00000478658 CRYGAP11844 174 aa4.04□□□□□ -1.76
USF3-202ENST00000478658 IGHV7-81A0A0B4J1V7 117 aa4.04□□□□□ -1.76
USF3-202ENST00000478658 LY6HO94772 140 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 C1orf64Q8NEQ6 169 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 SONP18583 2426 aaKnown RBP4.03□□□□□ -1.76
USF3-202ENST00000478658 MLANAQ16655 118 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 NTM-AS1Q6ZSK4 140 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 Q8N814 137 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 SLURP2P0DP57 97 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 MOBPQ13875 183 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 C11orf53Q8IXP5 236 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 A0A096LNI7 61 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 TNFRSF13BO14836 293 aaPredicted RBP4.03□□□□□ -1.76
USF3-202ENST00000478658 LINC00313P59037 77 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 U3KQK5 164 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.03□□□□□ -1.76
USF3-202ENST00000478658 SLPIP03973 132 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 IGFL4Q6B9Z1 124 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 C10orf91Q5T1B1 145 aa4.03□□□□□ -1.76
USF3-202ENST00000478658 B3GALT5-AS1P59052 145 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 SPINK1P00995 79 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 LRRK2Q5S007 2527 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 LINC00526Q96FQ7 95 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 WT1-ASQ06250 92 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 SSBP3-AS1Q7Z2R9 100 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 IGKV2D-30A0A075B6S6 120 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 IGKV2-30P06310 120 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 C17orf82Q86X59 251 aaPredicted RBP4.02□□□□□ -1.77
USF3-202ENST00000478658 TMEM105Q8N8V8 129 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 IGKV2-28A0A075B6P5 120 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 IGKV2D-28P01615 120 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 LTBP2Q14767 1821 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 FAM208BQ5VWN6 2430 aa4.02□□□□□ -1.77
USF3-202ENST00000478658 ZNF22P17026 224 aaPredicted RBP4.01□□□□□ -1.77
USF3-202ENST00000478658 TSHBP01222 138 aa4.01□□□□□ -1.77
USF3-202ENST00000478658 Q8N6K4 173 aa4.01□□□□□ -1.77
USF3-202ENST00000478658 DEFB104AQ8WTQ1 72 aa4.01□□□□□ -1.77
USF3-202ENST00000478658 I3L2K1 104 aa4.01□□□□□ -1.77
USF3-202ENST00000478658 Q8N7P7 452 aa4.01□□□□□ -1.77
USF3-202ENST00000478658 DEFB136Q30KP8 78 aa4□□□□□ -1.77
USF3-202ENST00000478658 CYSRT1A8MQ03 144 aa4□□□□□ -1.77
USF3-202ENST00000478658 FBXL19-AS1Q494R0 122 aa4□□□□□ -1.77
USF3-202ENST00000478658 MYO9AB2RTY4 2548 aa4□□□□□ -1.77
USF3-202ENST00000478658 LINC01556Q5JQF7 62 aa4□□□□□ -1.77
USF3-202ENST00000478658 Q8NBF4 154 aa4□□□□□ -1.77
USF3-202ENST00000478658 CUL9Q8IWT3 2517 aa4□□□□□ -1.77
USF3-202ENST00000478658 WFDC2Q14508 124 aa4□□□□□ -1.77
USF3-202ENST00000478658 Q6YL49 198 aa4□□□□□ -1.77
USF3-202ENST00000478658 COL11A2P13942 1736 aaPredicted RBP4□□□□□ -1.77
USF3-202ENST00000478658 IGFBP6P24592 240 aaPredicted RBP3.99□□□□□ -1.77
USF3-202ENST00000478658 TTC28Q96AY4 2481 aa3.99□□□□□ -1.77
USF3-202ENST00000478658 DOPEY1Q5JWR5 2465 aa3.99□□□□□ -1.77
USF3-202ENST00000478658 CDKN2A-AS1Q9UH64 79 aa3.99□□□□□ -1.77
USF3-202ENST00000478658 RPL39P62891 51 aaKnown RBP3.99□□□□□ -1.77
USF3-202ENST00000478658 FXYD2P54710 66 aa3.99□□□□□ -1.77
USF3-202ENST00000478658 RPS28P62857 69 aaKnown RBP3.99□□□□□ -1.77
USF3-202ENST00000478658 PPDPFQ9H3Y8 114 aa3.99□□□□□ -1.77
USF3-202ENST00000478658 DEFB114Q30KQ6 69 aa3.98□□□□□ -1.77
USF3-202ENST00000478658 CYYR1Q96J86 154 aa3.98□□□□□ -1.77
USF3-202ENST00000478658 Q6ZRP5 223 aa3.98□□□□□ -1.77
USF3-202ENST00000478658 LYPD5Q6UWN5 251 aa3.98□□□□□ -1.77
USF3-202ENST00000478658 PSPHP1O15172 72 aa3.98□□□□□ -1.77
USF3-202ENST00000478658 C1orf147Q96MC9 270 aaPredicted RBP3.98□□□□□ -1.77
USF3-202ENST00000478658 HIVEP3Q5T1R4 2406 aa3.97□□□□□ -1.77
USF3-202ENST00000478658 BEAN1Q3B7T3 259 aa3.97□□□□□ -1.77
USF3-202ENST00000478658 RPL37AP61513 92 aaKnown RBP3.97□□□□□ -1.77
USF3-202ENST00000478658 PTPN13Q12923 2485 aa3.97□□□□□ -1.77
USF3-202ENST00000478658 A8MZ25 164 aa3.97□□□□□ -1.77
USF3-202ENST00000478658 ADORA2A-AS1P86434 159 aa3.97□□□□□ -1.77
USF3-202ENST00000478658 SMIM11BQ8TCY0 68 aa3.97□□□□□ -1.77
USF3-202ENST00000478658 POM121L12Q8N7R1 296 aa3.97□□□□□ -1.77
USF3-202ENST00000478658 PRO3102Q9H379 93 aa3.97□□□□□ -1.77
USF3-202ENST00000478658 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.77
USF3-202ENST00000478658 PIEZO1Q92508 2521 aa3.96□□□□□ -1.78
USF3-202ENST00000478658 PCSK5Q92824 1860 aa3.96□□□□□ -1.78
USF3-202ENST00000478658 K7EQG2 157 aa3.96□□□□□ -1.78
USF3-202ENST00000478658 IGLV3-1P01715 115 aa3.96□□□□□ -1.78
USF3-202ENST00000478658 LINC00959A0A1B0GUT2 108 aa3.96□□□□□ -1.78
USF3-202ENST00000478658 ZNF503-AS2A6NEH8 195 aa3.95□□□□□ -1.78
USF3-202ENST00000478658 SOSTDC1Q6X4U4 206 aa3.95□□□□□ -1.78
USF3-202ENST00000478658 Q8N3U1 123 aa3.95□□□□□ -1.78
USF3-202ENST00000478658 PSMG3-AS1Q96PY0 264 aa3.95□□□□□ -1.78
USF3-202ENST00000478658 PINLYPA6NC86 204 aa3.95□□□□□ -1.78
USF3-202ENST00000478658 ZNF80P51504 273 aaPredicted RBP3.95□□□□□ -1.78
USF3-202ENST00000478658 C9orf163Q8N9P6 203 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms