RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 SMIM24O75264 130 aa-1.8□□□□□ -2.7
NCKAP1-204ENST00000477988 CBLN1P23435 193 aa-1.8□□□□□ -2.7
NCKAP1-204ENST00000477988 BAGE2Q86Y30 109 aa-1.8□□□□□ -2.7
NCKAP1-204ENST00000477988 HOPXQ9BPY8 73 aaPredicted RBP-1.8□□□□□ -2.7
NCKAP1-204ENST00000477988 MRPL40Q9NQ50 206 aaKnown RBP-1.8□□□□□ -2.7
NCKAP1-204ENST00000477988 NDUFA4L2Q9NRX3 87 aa-1.8□□□□□ -2.7
NCKAP1-204ENST00000477988 KIAA1551Q9HCM1 1747 aa-1.8□□□□□ -2.7
NCKAP1-204ENST00000477988 DMXL2Q8TDJ6 3036 aa-1.8□□□□□ -2.7
NCKAP1-204ENST00000477988 C9orf92A6NGG3 77 aa-1.81□□□□□ -2.7
NCKAP1-204ENST00000477988 F8VRH5 84 aa-1.81□□□□□ -2.7
NCKAP1-204ENST00000477988 ARPC5O15511 151 aa-1.81□□□□□ -2.7
NCKAP1-204ENST00000477988 SIX6O95475 246 aa-1.81□□□□□ -2.7
NCKAP1-204ENST00000477988 PAEPP09466 180 aa-1.81□□□□□ -2.7
NCKAP1-204ENST00000477988 BOLA2Q9H3K6 86 aa-1.81□□□□□ -2.7
NCKAP1-204ENST00000477988 CALML5Q9NZT1 146 aa-1.81□□□□□ -2.7
NCKAP1-204ENST00000477988 BOD1L1Q8NFC6 3051 aa-1.81□□□□□ -2.7
NCKAP1-204ENST00000477988 PRG4Q92954 1404 aaPredicted RBP-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 ROCK1Q13464 1354 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 SCN7AQ01118 1682 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 A6NIN4 97 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 APOC3P02656 99 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 MT1BP07438 61 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 TPPP2P59282 170 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 UBE2D3P61077 147 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 UBE2D2P62837 147 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 ALX1Q15699 326 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 KRTAP19-5Q3LI72 72 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 C10orf113Q5VZT2 155 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 PPP1R2P3Q6NXS1 205 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 OR8I2Q8N0Y5 310 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 Q8N8P6 123 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 PARVGQ9HBI0 331 aa-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 SPENQ96T58 3664 aaKnown RBP-1.82□□□□□ -2.7
NCKAP1-204ENST00000477988 MYH6P13533 1939 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 BPTFQ12830 3046 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 TRBV7-3A0A075B6L6 115 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 SSSCA1O60232 199 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 PFDN1O60925 122 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 KRTAP19-6Q3LI70 58 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 LELP1Q5T871 98 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 TMEM244Q5VVB8 128 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 TOMM20LQ6UXN7 152 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 OR9Q1Q8NGQ5 310 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 MAGOHBQ96A72 148 aaKnown RBP-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 LINC01558Q9Y6Z2 57 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 SPEF2Q9C093 1822 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 MAP3K1Q13233 1512 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 NUP188Q5SRE5 1749 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 PPIP5K1Q6PFW1 1433 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 NCOA3Q9Y6Q9 1424 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 TET3O43151 1660 aa-1.83□□□□□ -2.7
NCKAP1-204ENST00000477988 IGLC7A0M8Q6 106 aa-1.84□□□□□ -2.7
NCKAP1-204ENST00000477988 M0R129 80 aa-1.84□□□□□ -2.7
NCKAP1-204ENST00000477988 IL5P05113 134 aa-1.84□□□□□ -2.7
NCKAP1-204ENST00000477988 S100A7L2Q5SY68 101 aa-1.84□□□□□ -2.7
NCKAP1-204ENST00000477988 TMEM263Q8WUH6 116 aaKnown RBP-1.84□□□□□ -2.7
NCKAP1-204ENST00000477988 LINC01600Q96MT4 127 aa-1.84□□□□□ -2.7
NCKAP1-204ENST00000477988 SPRR4Q96PI1 79 aa-1.84□□□□□ -2.7
NCKAP1-204ENST00000477988 C1orf167Q5SNV9 1468 aa-1.84□□□□□ -2.7
NCKAP1-204ENST00000477988 ZNF518AQ6AHZ1 1483 aa-1.84□□□□□ -2.7
NCKAP1-204ENST00000477988 CCDC141Q6ZP82 1450 aa-1.84□□□□□ -2.7
NCKAP1-204ENST00000477988 ADGRG4Q8IZF6 3080 aa-1.85□□□□□ -2.7
NCKAP1-204ENST00000477988 TRAV13-2A0A0B4J235 113 aa-1.85□□□□□ -2.71
NCKAP1-204ENST00000477988 HCG22E2RYF7 251 aa-1.85□□□□□ -2.71
NCKAP1-204ENST00000477988 SCTP09683 121 aa-1.85□□□□□ -2.71
NCKAP1-204ENST00000477988 C10orf128Q5T292 105 aa-1.85□□□□□ -2.71
NCKAP1-204ENST00000477988 Q6ZUT4 128 aa-1.85□□□□□ -2.71
NCKAP1-204ENST00000477988 SPTBN5Q9NRC6 3674 aaKnown RBP-1.85□□□□□ -2.71
NCKAP1-204ENST00000477988 TRAV36DV7A0A075B6V5 113 aa-1.86□□□□□ -2.71
NCKAP1-204ENST00000477988 SAMD13Q5VXD3 122 aa-1.86□□□□□ -2.71
NCKAP1-204ENST00000477988 SCIMPQ6UWF3 145 aa-1.86□□□□□ -2.71
NCKAP1-204ENST00000477988 SEC11CQ9BY50 192 aa-1.86□□□□□ -2.71
NCKAP1-204ENST00000477988 CRIPTQ9P021 101 aa-1.86□□□□□ -2.71
NCKAP1-204ENST00000477988 ATPIF1Q9UII2 106 aa-1.86□□□□□ -2.71
NCKAP1-204ENST00000477988 PSME4Q14997 1843 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 DNAH10Q8IVF4 4471 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 FAM236AA0A1B0GUQ0 79 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 FAM236BA0A1B0GV22 79 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 A0A1B0GX51 115 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 MGPP08493 103 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 BTG2P78543 158 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 TCTE3Q8IZS6 198 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 TTC9CQ8N5M4 171 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 AQP10Q96PS8 301 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 CDK5RAP2Q96SN8 1893 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 SAR1AQ9NR31 198 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 ATMQ13315 3056 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 BCORQ6W2J9 1755 aa-1.87□□□□□ -2.71
NCKAP1-204ENST00000477988 PLEKHH2Q8IVE3 1493 aa-1.88□□□□□ -2.71
NCKAP1-204ENST00000477988 NLRP1Q9C000 1473 aa-1.88□□□□□ -2.71
NCKAP1-204ENST00000477988 LRRC37AA6NMS7 1700 aa-1.88□□□□□ -2.71
NCKAP1-204ENST00000477988 CEP152O94986 1710 aa-1.88□□□□□ -2.71
NCKAP1-204ENST00000477988 HMGN4O00479 90 aa-1.88□□□□□ -2.71
NCKAP1-204ENST00000477988 TNFSF15O95150 251 aa-1.88□□□□□ -2.71
NCKAP1-204ENST00000477988 SFT2D2O95562 160 aa-1.88□□□□□ -2.71
NCKAP1-204ENST00000477988 MT1GP13640 62 aa-1.88□□□□□ -2.71
NCKAP1-204ENST00000477988 RPS28P62857 69 aaKnown RBP-1.88□□□□□ -2.71
NCKAP1-204ENST00000477988 MRPS25P82663 173 aaKnown RBP-1.88□□□□□ -2.71
NCKAP1-204ENST00000477988 MT1MQ8N339 61 aa-1.88□□□□□ -2.71
NCKAP1-204ENST00000477988 TMEM35BQ8NCS4 154 aa-1.88□□□□□ -2.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms