RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 IGHV3-30-3P0DP02 117 aa6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 IGHV3-30-5P0DP03 117 aa6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 KRTDAPP60985 99 aa6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 RPL39P62891 51 aaKnown RBP6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 SMAGPQ0VAQ4 97 aa6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 NTM-AS1Q6ZSK4 140 aa6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 SCGB3A1Q96QR1 104 aa6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 MAP1LC3CQ9BXW4 147 aa6.3□□□□□ -1.4
SMARCB1-206ENST00000477836 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.29□□□□□ -1.4
SMARCB1-206ENST00000477836 TIRAPP58753 221 aa6.29□□□□□ -1.4
SMARCB1-206ENST00000477836 AMMECR1LQ6DCA0 310 aa6.29□□□□□ -1.4
SMARCB1-206ENST00000477836 LINC00173Q6ZV60 143 aa6.29□□□□□ -1.4
SMARCB1-206ENST00000477836 ERASQ7Z444 233 aa6.29□□□□□ -1.4
SMARCB1-206ENST00000477836 BAALCQ8WXS3 180 aa6.29□□□□□ -1.4
SMARCB1-206ENST00000477836 IFI27L1Q96BM0 104 aa6.29□□□□□ -1.4
SMARCB1-206ENST00000477836 TIMM17AQ99595 171 aa6.29□□□□□ -1.4
SMARCB1-206ENST00000477836 CHCHD5Q9BSY4 110 aa6.29□□□□□ -1.4
SMARCB1-206ENST00000477836 SPANXA1Q9NS26 97 aa6.29□□□□□ -1.4
SMARCB1-206ENST00000477836 FSIP2Q5CZC0 6907 aa6.29□□□□□ -1.4
SMARCB1-206ENST00000477836 C20orf202A1L168 122 aa6.28□□□□□ -1.4
SMARCB1-206ENST00000477836 H0Y8G0 127 aa6.28□□□□□ -1.4
SMARCB1-206ENST00000477836 H7C423 109 aa6.28□□□□□ -1.4
SMARCB1-206ENST00000477836 Q6ZN92 141 aa6.28□□□□□ -1.4
SMARCB1-206ENST00000477836 TMEM141Q96I45 108 aa6.28□□□□□ -1.4
SMARCB1-206ENST00000477836 UBE2D4Q9Y2X8 147 aa6.28□□□□□ -1.4
SMARCB1-206ENST00000477836 IGIPA6NJ69 53 aa6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 SYS1-DBNDD2H3BUS1 97 aa6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 NPSP0C0P6 89 aa6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 C3orf79P0CE67 100 aa6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 FGF6P10767 208 aa6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 ZNF25P17030 456 aaPredicted RBP6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 PKIAP61925 76 aa6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 PAPPA-AS1Q5QFB9 102 aa6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 DGAT2L7PQ6IED9 249 aa6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 MRPL52Q86TS9 123 aaKnown RBP6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 OR5A1Q8NGJ0 315 aa6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 TMEM101Q96IK0 257 aa6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 TIMM21Q9BVV7 248 aa6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 PYGO1Q9Y3Y4 419 aa6.27□□□□□ -1.41
SMARCB1-206ENST00000477836 TRAV8-6A0A0B4J262 113 aa6.26□□□□□ -1.41
SMARCB1-206ENST00000477836 A0A0U1RQV1 116 aa6.26□□□□□ -1.41
SMARCB1-206ENST00000477836 GAGE6Q13070 117 aa6.26□□□□□ -1.41
SMARCB1-206ENST00000477836 Q6ZUT4 128 aa6.26□□□□□ -1.41
SMARCB1-206ENST00000477836 Q8N976 141 aa6.26□□□□□ -1.41
SMARCB1-206ENST00000477836 IGLV4-3A0A075B6K6 122 aa6.25□□□□□ -1.41
SMARCB1-206ENST00000477836 PRSS1P07477 247 aa6.25□□□□□ -1.41
SMARCB1-206ENST00000477836 PET117Q6UWS5 81 aa6.25□□□□□ -1.41
SMARCB1-206ENST00000477836 LINC01600Q96MT4 127 aa6.25□□□□□ -1.41
SMARCB1-206ENST00000477836 CSDC2Q9Y534 153 aaKnown RBP6.25□□□□□ -1.41
SMARCB1-206ENST00000477836 A0A087WX48 190 aa6.24□□□□□ -1.41
SMARCB1-206ENST00000477836 TRAV12-1A0A0B4J245 112 aa6.24□□□□□ -1.41
SMARCB1-206ENST00000477836 TMEM262E9PQX1 116 aa6.24□□□□□ -1.41
SMARCB1-206ENST00000477836 SCGB1D1O95968 90 aa6.24□□□□□ -1.41
SMARCB1-206ENST00000477836 SMIM6P0DI80 62 aa6.24□□□□□ -1.41
SMARCB1-206ENST00000477836 MRPS36P82909 103 aaKnown RBP6.24□□□□□ -1.41
SMARCB1-206ENST00000477836 PMVKQ15126 192 aa6.24□□□□□ -1.41
SMARCB1-206ENST00000477836 MPV17L2Q567V2 206 aa6.24□□□□□ -1.41
SMARCB1-206ENST00000477836 TEX43Q6ZNM6 134 aa6.24□□□□□ -1.41
SMARCB1-206ENST00000477836 C2orf88Q9BSF0 95 aa6.24□□□□□ -1.41
SMARCB1-206ENST00000477836 TRAV8-3A0A0A6YYJ7 113 aa6.23□□□□□ -1.41
SMARCB1-206ENST00000477836 RBX1P62877 108 aa6.23□□□□□ -1.41
SMARCB1-206ENST00000477836 JOSD1Q15040 202 aaPredicted RBP6.23□□□□□ -1.41
SMARCB1-206ENST00000477836 RNASE13Q5GAN3 156 aaKnown RBP6.23□□□□□ -1.41
SMARCB1-206ENST00000477836 LINC01545Q5VT33 79 aa6.23□□□□□ -1.41
SMARCB1-206ENST00000477836 OPRPNQ99935 248 aaPredicted RBP6.23□□□□□ -1.41
SMARCB1-206ENST00000477836 VCX2Q9H322 139 aa6.23□□□□□ -1.41
SMARCB1-206ENST00000477836 F8VRH5 84 aa6.22□□□□□ -1.41
SMARCB1-206ENST00000477836 PLNP26678 52 aa6.22□□□□□ -1.41
SMARCB1-206ENST00000477836 PYY3Q5JQD4 70 aa6.22□□□□□ -1.41
SMARCB1-206ENST00000477836 ZNF664Q8N3J9 261 aa6.22□□□□□ -1.41
SMARCB1-206ENST00000477836 Q8N3U1 123 aa6.22□□□□□ -1.41
SMARCB1-206ENST00000477836 PMCHL2Q9BQD1 86 aa6.22□□□□□ -1.41
SMARCB1-206ENST00000477836 CST9LQ9H4G1 147 aa6.22□□□□□ -1.41
SMARCB1-206ENST00000477836 CDC42SE2Q9NRR3 84 aa6.22□□□□□ -1.41
SMARCB1-206ENST00000477836 CHTOPQ9Y3Y2 248 aaKnown RBP6.22□□□□□ -1.41
SMARCB1-206ENST00000477836 IGLV4-60A0A075B6I1 120 aa6.21□□□□□ -1.42
SMARCB1-206ENST00000477836 A0A1B0GUV1 79 aa6.21□□□□□ -1.42
SMARCB1-206ENST00000477836 DPM2O94777 84 aa6.21□□□□□ -1.42
SMARCB1-206ENST00000477836 LCE2AQ5TA79 106 aaPredicted RBP6.21□□□□□ -1.42
SMARCB1-206ENST00000477836 AMELXQ99217 191 aa6.21□□□□□ -1.42
SMARCB1-206ENST00000477836 MRPL35Q9NZE8 188 aaKnown RBP6.21□□□□□ -1.42
SMARCB1-206ENST00000477836 COX11Q9Y6N1 276 aa6.21□□□□□ -1.42
SMARCB1-206ENST00000477836 ANGP03950 147 aaKnown RBP6.2□□□□□ -1.42
SMARCB1-206ENST00000477836 ZC2HC1BQ5TFG8 222 aa6.2□□□□□ -1.42
SMARCB1-206ENST00000477836 FAM104AQ969W3 186 aa6.2□□□□□ -1.42
SMARCB1-206ENST00000477836 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.2□□□□□ -1.42
SMARCB1-206ENST00000477836 IGLV4-69A0A075B6H9 119 aa6.19□□□□□ -1.42
SMARCB1-206ENST00000477836 IGKV2D-24A0A075B6R9 120 aa6.19□□□□□ -1.42
SMARCB1-206ENST00000477836 TRAV13-1A0A0B4J241 112 aa6.19□□□□□ -1.42
SMARCB1-206ENST00000477836 IGKV3OR2-268A0A0C4DH90 116 aa6.19□□□□□ -1.42
SMARCB1-206ENST00000477836 A0A0J9YXV3 536 aa6.19□□□□□ -1.42
SMARCB1-206ENST00000477836 IGKCP01834 107 aa6.19□□□□□ -1.42
SMARCB1-206ENST00000477836 CRPP02741 224 aa6.19□□□□□ -1.42
SMARCB1-206ENST00000477836 UBE2D1P51668 147 aa6.19□□□□□ -1.42
SMARCB1-206ENST00000477836 CLPSL2Q6UWE3 100 aa6.19□□□□□ -1.42
SMARCB1-206ENST00000477836 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
SMARCB1-206ENST00000477836 HSBP1L1C9JCN9 74 aa6.18□□□□□ -1.42
SMARCB1-206ENST00000477836 PANO1I0J062 215 aa6.18□□□□□ -1.42
SMARCB1-206ENST00000477836 IGLC3P0DOY3 106 aa6.18□□□□□ -1.42
SMARCB1-206ENST00000477836 KRTAP10-8P60410 259 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms