RNA–Protein interactions for RNA: ENST00000477552.1

PTPRD-209, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 4

Gene PTPRD, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-209ENST00000477552 KRTAP3-2Q9BYR7 98 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 CDIP1Q9H305 208 aa5.95□□□□□ -1.46
PTPRD-209ENST00000477552 CSMD1Q96PZ7 3565 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 A0A087WZ39 114 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 TRAV8-4A0A0B4J246 113 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 PLAC8L1A1L4L8 177 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 GAGE7O76087 117 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 GIG44P09565 113 aaPredicted RBP5.94□□□□□ -1.46
PTPRD-209ENST00000477552 GAGE12FP0CL80 117 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 GAGE12GP0CL81 117 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 GAGE12IP0CL82 117 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 INAFM2P0DMQ5 153 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 LINC00694P0DN24 101 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 CXCL5P42830 114 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 KRTAP1-1Q07627 177 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 SS18Q15532 418 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 RNASE13Q5GAN3 156 aaKnown RBP5.94□□□□□ -1.46
PTPRD-209ENST00000477552 PRO0255Q9UI72 69 aa5.94□□□□□ -1.46
PTPRD-209ENST00000477552 EIF4EBP3O60516 100 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-209ENST00000477552 CRPP02741 224 aa5.93□□□□□ -1.46
PTPRD-209ENST00000477552 RPL28P46779 137 aaKnown RBP5.93□□□□□ -1.46
PTPRD-209ENST00000477552 APOC4P55056 127 aa5.93□□□□□ -1.46
PTPRD-209ENST00000477552 COX6A2Q02221 97 aa5.93□□□□□ -1.46
PTPRD-209ENST00000477552 FHL2Q14192 279 aa5.93□□□□□ -1.46
PTPRD-209ENST00000477552 NTN5Q8WTR8 489 aaPredicted RBP5.93□□□□□ -1.46
PTPRD-209ENST00000477552 CHCHD5Q9BSY4 110 aa5.93□□□□□ -1.46
PTPRD-209ENST00000477552 TLN2Q9Y4G6 2542 aa5.93□□□□□ -1.46
PTPRD-209ENST00000477552 FLNAP21333 2647 aaKnown RBP5.93□□□□□ -1.46
PTPRD-209ENST00000477552 A0A1B0GX51 115 aa5.92□□□□□ -1.46
PTPRD-209ENST00000477552 RPL35AP18077 110 aaKnown RBP5.92□□□□□ -1.46
PTPRD-209ENST00000477552 COX17Q14061 63 aa5.92□□□□□ -1.46
PTPRD-209ENST00000477552 IMUPQ9GZP8 106 aa5.92□□□□□ -1.46
PTPRD-209ENST00000477552 Q9UF83 564 aa5.92□□□□□ -1.46
PTPRD-209ENST00000477552 ZFYVE26Q68DK2 2539 aa5.91□□□□□ -1.46
PTPRD-209ENST00000477552 IGHV3OR16-9A0A0B4J2B5 98 aa5.91□□□□□ -1.46
PTPRD-209ENST00000477552 H3BQ85 93 aa5.91□□□□□ -1.46
PTPRD-209ENST00000477552 PRM2P04554 102 aa5.91□□□□□ -1.46
PTPRD-209ENST00000477552 CKS1BP61024 79 aa5.91□□□□□ -1.46
PTPRD-209ENST00000477552 GAGE2BQ13066 116 aa5.91□□□□□ -1.46
PTPRD-209ENST00000477552 GAGE2EQ4V326 116 aa5.91□□□□□ -1.46
PTPRD-209ENST00000477552 Q8IZM0 81 aa5.91□□□□□ -1.46
PTPRD-209ENST00000477552 LINC00482Q8N8I6 264 aa5.91□□□□□ -1.46
PTPRD-209ENST00000477552 GAGE2DQ9UEU5 116 aa5.91□□□□□ -1.46
PTPRD-209ENST00000477552 EPG5Q9HCE0 2579 aa5.91□□□□□ -1.46
PTPRD-209ENST00000477552 DNAL4O96015 105 aa5.9□□□□□ -1.46
PTPRD-209ENST00000477552 PLA2G2AP14555 144 aa5.9□□□□□ -1.46
PTPRD-209ENST00000477552 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.9□□□□□ -1.46
PTPRD-209ENST00000477552 DAND5Q8N907 189 aa5.9□□□□□ -1.46
PTPRD-209ENST00000477552 WNK1Q9H4A3 2382 aa5.9□□□□□ -1.46
PTPRD-209ENST00000477552 VPS13CQ709C8 3753 aa5.89□□□□□ -1.47
PTPRD-209ENST00000477552 LINC00959A0A1B0GUT2 108 aa5.89□□□□□ -1.47
PTPRD-209ENST00000477552 MIFP14174 115 aa5.89□□□□□ -1.47
PTPRD-209ENST00000477552 XGP55808 180 aa5.89□□□□□ -1.47
PTPRD-209ENST00000477552 C6orf226Q5I0X4 101 aa5.89□□□□□ -1.47
PTPRD-209ENST00000477552 CITED1Q99966 193 aa5.89□□□□□ -1.47
PTPRD-209ENST00000477552 SND1-IT1Q9HBX3 110 aa5.89□□□□□ -1.47
PTPRD-209ENST00000477552 A8MZ25 164 aa5.88□□□□□ -1.47
PTPRD-209ENST00000477552 NDUFC2O95298 119 aa5.88□□□□□ -1.47
PTPRD-209ENST00000477552 ATP5G1P05496 136 aa5.88□□□□□ -1.47
PTPRD-209ENST00000477552 LINC00158P58513 81 aa5.88□□□□□ -1.47
PTPRD-209ENST00000477552 GAGE6Q13070 117 aa5.88□□□□□ -1.47
PTPRD-209ENST00000477552 NF1P21359 2839 aa5.88□□□□□ -1.47
PTPRD-209ENST00000477552 TEX49A0A1B0GTD5 131 aa5.87□□□□□ -1.47
PTPRD-209ENST00000477552 PAX4O43316 350 aa5.87□□□□□ -1.47
PTPRD-209ENST00000477552 GHRHP01286 108 aa5.87□□□□□ -1.47
PTPRD-209ENST00000477552 MT-ATP8P03928 68 aa5.87□□□□□ -1.47
PTPRD-209ENST00000477552 GYPEP15421 78 aa5.87□□□□□ -1.47
PTPRD-209ENST00000477552 TTC32Q5I0X7 151 aa5.87□□□□□ -1.47
PTPRD-209ENST00000477552 CD164L2Q6UWJ8 174 aa5.87□□□□□ -1.47
PTPRD-209ENST00000477552 MIR7-3HGQ8N6C7 128 aa5.87□□□□□ -1.47
PTPRD-209ENST00000477552 WIPF1O43516 503 aa5.86□□□□□ -1.47
PTPRD-209ENST00000477552 CRLF1O75462 422 aa5.86□□□□□ -1.47
PTPRD-209ENST00000477552 BAALC-AS2P0C853 105 aa5.86□□□□□ -1.47
PTPRD-209ENST00000477552 NPC2P61916 151 aa5.86□□□□□ -1.47
PTPRD-209ENST00000477552 CFAP161Q6P656 301 aa5.86□□□□□ -1.47
PTPRD-209ENST00000477552 CLEC2BQ92478 149 aa5.86□□□□□ -1.47
PTPRD-209ENST00000477552 ANAPC13Q9BS18 74 aa5.86□□□□□ -1.47
PTPRD-209ENST00000477552 TOMM7Q9P0U1 55 aa5.86□□□□□ -1.47
PTPRD-209ENST00000477552 PDZD2O15018 2839 aa5.85□□□□□ -1.47
PTPRD-209ENST00000477552 SETXQ7Z333 2677 aaKnown RBP5.85□□□□□ -1.47
PTPRD-209ENST00000477552 IGHV4-28A0A0C4DH34 117 aa5.85□□□□□ -1.47
PTPRD-209ENST00000477552 TRBV7-7A0A0K0K1E9 115 aa5.85□□□□□ -1.47
PTPRD-209ENST00000477552 LY6G6DO95868 133 aa5.85□□□□□ -1.47
PTPRD-209ENST00000477552 DEFB130BP0DP73 79 aa5.85□□□□□ -1.47
PTPRD-209ENST00000477552 DEFB130AP0DP74 79 aa5.85□□□□□ -1.47
PTPRD-209ENST00000477552 SOSTDC1Q6X4U4 206 aa5.85□□□□□ -1.47
PTPRD-209ENST00000477552 LINC00643Q86TS7 51 aa5.85□□□□□ -1.47
PTPRD-209ENST00000477552 X6R8D5 127 aa5.85□□□□□ -1.47
PTPRD-209ENST00000477552 SVEP1Q4LDE5 3571 aa5.85□□□□□ -1.47
PTPRD-209ENST00000477552 HIVEP2P31629 2446 aa5.84□□□□□ -1.47
PTPRD-209ENST00000477552 IGLV4-60A0A075B6I1 120 aa5.84□□□□□ -1.47
PTPRD-209ENST00000477552 H3BNG1 76 aa5.84□□□□□ -1.47
PTPRD-209ENST00000477552 SPART-AS1P0CW21 52 aa5.84□□□□□ -1.47
PTPRD-209ENST00000477552 DAD1P61803 113 aa5.84□□□□□ -1.47
PTPRD-209ENST00000477552 C15orf53Q8NAA6 179 aa5.84□□□□□ -1.47
PTPRD-209ENST00000477552 TMEM126AQ9H061 195 aa5.84□□□□□ -1.47
PTPRD-209ENST00000477552 SONP18583 2426 aaKnown RBP5.84□□□□□ -1.48
PTPRD-209ENST00000477552 CCDC168Q8NDH2 2452 aa5.83□□□□□ -1.48
PTPRD-209ENST00000477552 LOC100131303A0A0U1RQF7 123 aa5.83□□□□□ -1.48
PTPRD-209ENST00000477552 F8WDY8 70 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms