RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 FOXI1Q12951 378 aa10.14□□□□□ -0.79
SEC13-215ENST00000477547 PMVKQ15126 192 aa10.14□□□□□ -0.79
SEC13-215ENST00000477547 CD164L2Q6UWJ8 174 aa10.14□□□□□ -0.79
SEC13-215ENST00000477547 A0A087WTM6 91 aa10.13□□□□□ -0.79
SEC13-215ENST00000477547 FABP4P15090 132 aa10.13□□□□□ -0.79
SEC13-215ENST00000477547 WFDC2Q14508 124 aa10.13□□□□□ -0.79
SEC13-215ENST00000477547 HSPB8Q9UJY1 196 aa10.13□□□□□ -0.79
SEC13-215ENST00000477547 HSPG2P98160 4391 aa10.13□□□□□ -0.79
SEC13-215ENST00000477547 PKD1P98161 4303 aa10.12□□□□□ -0.79
SEC13-215ENST00000477547 LRCOL1A6NCL2 159 aa10.12□□□□□ -0.79
SEC13-215ENST00000477547 USP17L23D6RBM5 183 aa10.12□□□□□ -0.79
SEC13-215ENST00000477547 LINC00242Q5T6M2 205 aa10.12□□□□□ -0.79
SEC13-215ENST00000477547 CST9LQ9H4G1 147 aa10.12□□□□□ -0.79
SEC13-215ENST00000477547 EREGO14944 169 aa10.11□□□□□ -0.79
SEC13-215ENST00000477547 S100A6P06703 90 aa10.11□□□□□ -0.79
SEC13-215ENST00000477547 PRSS1P07477 247 aa10.11□□□□□ -0.79
SEC13-215ENST00000477547 COX7A2LO14548 114 aa10.1□□□□□ -0.79
SEC13-215ENST00000477547 SEC11AP67812 179 aa10.1□□□□□ -0.79
SEC13-215ENST00000477547 GEMIN7Q9H840 131 aaKnown RBP10.1□□□□□ -0.79
SEC13-215ENST00000477547 A0A0J9YXV3 536 aa10.09□□□□□ -0.79
SEC13-215ENST00000477547 H0Y8G0 127 aa10.09□□□□□ -0.79
SEC13-215ENST00000477547 FAM19A3Q7Z5A8 133 aa10.09□□□□□ -0.79
SEC13-215ENST00000477547 C5orf38Q86SI9 138 aa10.09□□□□□ -0.79
SEC13-215ENST00000477547 PACRGQ96M98 296 aaPredicted RBP10.09□□□□□ -0.79
SEC13-215ENST00000477547 CHAC1Q9BUX1 264 aa10.09□□□□□ -0.79
SEC13-215ENST00000477547 IGHV3OR16-9A0A0B4J2B5 98 aa10.08□□□□□ -0.8
SEC13-215ENST00000477547 MALP21145 153 aa10.08□□□□□ -0.8
SEC13-215ENST00000477547 HERVK_113P63121 156 aa10.08□□□□□ -0.8
SEC13-215ENST00000477547 COX6A2Q02221 97 aa10.08□□□□□ -0.8
SEC13-215ENST00000477547 C14orf177Q52M58 125 aa10.08□□□□□ -0.8
SEC13-215ENST00000477547 Q8N814 137 aa10.08□□□□□ -0.8
SEC13-215ENST00000477547 C15orf56Q8N910 161 aa10.08□□□□□ -0.8
SEC13-215ENST00000477547 HERC1Q15751 4861 aa10.08□□□□□ -0.8
SEC13-215ENST00000477547 TRAV12-1A0A0B4J245 112 aa10.07□□□□□ -0.8
SEC13-215ENST00000477547 TINCRA0A1B0GVN0 87 aa10.07□□□□□ -0.8
SEC13-215ENST00000477547 CHTOPQ9Y3Y2 248 aaKnown RBP10.07□□□□□ -0.8
SEC13-215ENST00000477547 IGLV4-69A0A075B6H9 119 aa10.07□□□□□ -0.8
SEC13-215ENST00000477547 IGHV1-58A0A0C4DH39 117 aa10.07□□□□□ -0.8
SEC13-215ENST00000477547 IGLC3P0DOY3 106 aa10.07□□□□□ -0.8
SEC13-215ENST00000477547 HIGD2BQ4VC39 106 aa10.07□□□□□ -0.8
SEC13-215ENST00000477547 CFAP161Q6P656 301 aa10.07□□□□□ -0.8
SEC13-215ENST00000477547 LINC00469Q8N7U9 141 aa10.07□□□□□ -0.8
SEC13-215ENST00000477547 MAP1LC3CQ9BXW4 147 aa10.07□□□□□ -0.8
SEC13-215ENST00000477547 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.06□□□□□ -0.8
SEC13-215ENST00000477547 A0A087WZ39 114 aa10.06□□□□□ -0.8
SEC13-215ENST00000477547 S100A2P29034 98 aa10.06□□□□□ -0.8
SEC13-215ENST00000477547 HIST3H2BBQ8N257 126 aa10.06□□□□□ -0.8
SEC13-215ENST00000477547 IGLV5-45A0A087WSX0 123 aa10.05□□□□□ -0.8
SEC13-215ENST00000477547 GVQW2A0A096LPI5 108 aaPredicted RBP10.05□□□□□ -0.8
SEC13-215ENST00000477547 hDV102S1A0JD36 115 aa10.05□□□□□ -0.8
SEC13-215ENST00000477547 F8VRH5 84 aa10.05□□□□□ -0.8
SEC13-215ENST00000477547 APOMO95445 188 aa10.05□□□□□ -0.8
SEC13-215ENST00000477547 ODF1Q14990 250 aa10.05□□□□□ -0.8
SEC13-215ENST00000477547 SPATA12Q7Z6I5 190 aa10.05□□□□□ -0.8
SEC13-215ENST00000477547 MRPL35Q9NZE8 188 aaKnown RBP10.05□□□□□ -0.8
SEC13-215ENST00000477547 CDKN2A-AS1Q9UH64 79 aa10.05□□□□□ -0.8
SEC13-215ENST00000477547 C11orf86A6NJI1 115 aa10.04□□□□□ -0.8
SEC13-215ENST00000477547 ORAOV1Q8WV07 137 aa10.04□□□□□ -0.8
SEC13-215ENST00000477547 TMA7Q9Y2S6 64 aaKnown RBP10.04□□□□□ -0.8
SEC13-215ENST00000477547 ZNF22P17026 224 aaPredicted RBP10.03□□□□□ -0.8
SEC13-215ENST00000477547 SNRPEP62304 92 aaKnown RBP10.03□□□□□ -0.8
SEC13-215ENST00000477547 SPAG11BQ08648 103 aa10.03□□□□□ -0.8
SEC13-215ENST00000477547 NTN5Q8WTR8 489 aaPredicted RBP10.03□□□□□ -0.8
SEC13-215ENST00000477547 IGHV3-64A0A075B6Q5 118 aa10.02□□□□□ -0.81
SEC13-215ENST00000477547 H3BRM9 83 aa10.02□□□□□ -0.81
SEC13-215ENST00000477547 SYS1-DBNDD2H3BUS1 97 aa10.02□□□□□ -0.81
SEC13-215ENST00000477547 FUSP35637 526 aaKnown RBP eCLIP10.02□□□□□ -0.81
SEC13-215ENST00000477547 KRTAP10-2P60368 255 aa10.02□□□□□ -0.81
SEC13-215ENST00000477547 KRTDAPP60985 99 aa10.02□□□□□ -0.81
SEC13-215ENST00000477547 LINC01561Q8N1V8 128 aa10.02□□□□□ -0.81
SEC13-215ENST00000477547 OR10D4PQ8NGN7 298 aa10.02□□□□□ -0.81
SEC13-215ENST00000477547 HIST1H2BLQ99880 126 aa10.02□□□□□ -0.81
SEC13-215ENST00000477547 PMCHL2Q9BQD1 86 aa10.02□□□□□ -0.81
SEC13-215ENST00000477547 ZNF561-AS1K7EIQ3 104 aa10.01□□□□□ -0.81
SEC13-215ENST00000477547 C3orf79P0CE67 100 aa10.01□□□□□ -0.81
SEC13-215ENST00000477547 TMEM170BQ5T4T1 132 aa10.01□□□□□ -0.81
SEC13-215ENST00000477547 LINC00526Q96FQ7 95 aa10.01□□□□□ -0.81
SEC13-215ENST00000477547 IGLV5-52A0A0A0MRZ9 124 aa10□□□□□ -0.81
SEC13-215ENST00000477547 C5orf52A6NGY3 159 aa10□□□□□ -0.81
SEC13-215ENST00000477547 SMIM1B2RUZ4 78 aa10□□□□□ -0.81
SEC13-215ENST00000477547 SPINK8P0C7L1 97 aa10□□□□□ -0.81
SEC13-215ENST00000477547 CDPF1Q6NVV7 123 aa10□□□□□ -0.81
SEC13-215ENST00000477547 DPM2O94777 84 aa9.99□□□□□ -0.81
SEC13-215ENST00000477547 PLNP26678 52 aa9.99□□□□□ -0.81
SEC13-215ENST00000477547 PET117Q6UWS5 81 aa9.99□□□□□ -0.81
SEC13-215ENST00000477547 TOMM7Q9P0U1 55 aa9.98□□□□□ -0.81
SEC13-215ENST00000477547 PRSS2P07478 247 aa9.97□□□□□ -0.81
SEC13-215ENST00000477547 CNBPP62633 177 aaKnown RBP9.97□□□□□ -0.81
SEC13-215ENST00000477547 LINC01545Q5VT33 79 aa9.97□□□□□ -0.81
SEC13-215ENST00000477547 PGPEP1Q9NXJ5 209 aa9.97□□□□□ -0.81
SEC13-215ENST00000477547 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.96□□□□□ -0.82
SEC13-215ENST00000477547 C20orf202A1L168 122 aa9.96□□□□□ -0.82
SEC13-215ENST00000477547 C16orf90A8MZG2 172 aa9.96□□□□□ -0.82
SEC13-215ENST00000477547 IGKCP01834 107 aa9.96□□□□□ -0.82
SEC13-215ENST00000477547 Q8IZM0 81 aa9.96□□□□□ -0.82
SEC13-215ENST00000477547 CARD19Q96LW7 228 aa9.96□□□□□ -0.82
SEC13-215ENST00000477547 CAMK2N2Q96S95 79 aa9.96□□□□□ -0.82
SEC13-215ENST00000477547 LRP1BQ9NZR2 4599 aa9.96□□□□□ -0.82
SEC13-215ENST00000477547 SYCNQ0VAF6 134 aa9.95□□□□□ -0.82
SEC13-215ENST00000477547 C2orf48Q96LS8 159 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms