RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 HERVK_113P63121 156 aa10.75□□□□□ -0.69
VHL-203ENST00000477538 GEMIN7Q9H840 131 aaKnown RBP10.75□□□□□ -0.69
VHL-203ENST00000477538 IGLV4-69A0A075B6H9 119 aa10.74□□□□□ -0.69
VHL-203ENST00000477538 SYS1-DBNDD2H3BUS1 97 aa10.74□□□□□ -0.69
VHL-203ENST00000477538 RTL8CO15255 209 aa10.74□□□□□ -0.69
VHL-203ENST00000477538 IGLC3P0DOY3 106 aa10.74□□□□□ -0.69
VHL-203ENST00000477538 COX6A2Q02221 97 aa10.74□□□□□ -0.69
VHL-203ENST00000477538 ODF1Q14990 250 aa10.74□□□□□ -0.69
VHL-203ENST00000477538 MAPKAPK5-AS1Q8N8E1 139 aa10.74□□□□□ -0.69
VHL-203ENST00000477538 IGHV3OR16-9A0A0B4J2B5 98 aa10.73□□□□□ -0.69
VHL-203ENST00000477538 F8VRH5 84 aa10.73□□□□□ -0.69
VHL-203ENST00000477538 CHAC1Q9BUX1 264 aa10.73□□□□□ -0.69
VHL-203ENST00000477538 MRPL35Q9NZE8 188 aaKnown RBP10.73□□□□□ -0.69
VHL-203ENST00000477538 COX7A2LO14548 114 aa10.72□□□□□ -0.69
VHL-203ENST00000477538 PET117Q6UWS5 81 aa10.72□□□□□ -0.69
VHL-203ENST00000477538 SPATA12Q7Z6I5 190 aa10.72□□□□□ -0.69
VHL-203ENST00000477538 C5orf38Q86SI9 138 aa10.72□□□□□ -0.69
VHL-203ENST00000477538 RYR2Q92736 4967 aa10.72□□□□□ -0.69
VHL-203ENST00000477538 LINC00469Q8N7U9 141 aa10.71□□□□□ -0.69
VHL-203ENST00000477538 CDKN2A-AS1Q9UH64 79 aa10.71□□□□□ -0.69
VHL-203ENST00000477538 IGLV5-45A0A087WSX0 123 aa10.7□□□□□ -0.7
VHL-203ENST00000477538 C11orf86A6NJI1 115 aa10.7□□□□□ -0.7
VHL-203ENST00000477538 PMCHL2Q9BQD1 86 aa10.7□□□□□ -0.7
VHL-203ENST00000477538 A0A087WZ39 114 aa10.69□□□□□ -0.7
VHL-203ENST00000477538 USP17L23D6RBM5 183 aa10.69□□□□□ -0.7
VHL-203ENST00000477538 LECT2O14960 151 aa10.69□□□□□ -0.7
VHL-203ENST00000477538 ZNF22P17026 224 aaPredicted RBP10.69□□□□□ -0.7
VHL-203ENST00000477538 MALP21145 153 aa10.69□□□□□ -0.7
VHL-203ENST00000477538 LINC01545Q5VT33 79 aa10.69□□□□□ -0.7
VHL-203ENST00000477538 LRCOL1A6NCL2 159 aa10.68□□□□□ -0.7
VHL-203ENST00000477538 DPM2O94777 84 aa10.68□□□□□ -0.7
VHL-203ENST00000477538 PLNP26678 52 aa10.68□□□□□ -0.7
VHL-203ENST00000477538 TNP2Q05952 138 aa10.68□□□□□ -0.7
VHL-203ENST00000477538 WFDC2Q14508 124 aa10.68□□□□□ -0.7
VHL-203ENST00000477538 OR10D4PQ8NGN7 298 aa10.68□□□□□ -0.7
VHL-203ENST00000477538 DNAH10Q8IVF4 4471 aa10.68□□□□□ -0.7
VHL-203ENST00000477538 IGHV1-58A0A0C4DH39 117 aa10.67□□□□□ -0.7
VHL-203ENST00000477538 C20orf202A1L168 122 aa10.67□□□□□ -0.7
VHL-203ENST00000477538 H3BRM9 83 aa10.67□□□□□ -0.7
VHL-203ENST00000477538 APOMO95445 188 aa10.67□□□□□ -0.7
VHL-203ENST00000477538 IGKCP01834 107 aa10.67□□□□□ -0.7
VHL-203ENST00000477538 TMEM170BQ5T4T1 132 aa10.67□□□□□ -0.7
VHL-203ENST00000477538 CFAP161Q6P656 301 aa10.67□□□□□ -0.7
VHL-203ENST00000477538 LINC00336Q6ZUF6 198 aa10.67□□□□□ -0.7
VHL-203ENST00000477538 LINC01561Q8N1V8 128 aa10.67□□□□□ -0.7
VHL-203ENST00000477538 C15orf56Q8N910 161 aa10.67□□□□□ -0.7
VHL-203ENST00000477538 A0A087WTM6 91 aa10.66□□□□□ -0.7
VHL-203ENST00000477538 FRAS1Q86XX4 4008 aa10.66□□□□□ -0.7
VHL-203ENST00000477538 C14orf177Q52M58 125 aa10.65□□□□□ -0.7
VHL-203ENST00000477538 DNAH2Q9P225 4427 aa10.65□□□□□ -0.71
VHL-203ENST00000477538 IGHV3-64A0A075B6Q5 118 aa10.64□□□□□ -0.71
VHL-203ENST00000477538 SMIM1B2RUZ4 78 aa10.64□□□□□ -0.71
VHL-203ENST00000477538 SPINK8P0C7L1 97 aa10.64□□□□□ -0.71
VHL-203ENST00000477538 HIGD2BQ4VC39 106 aa10.64□□□□□ -0.71
VHL-203ENST00000477538 ORAOV1Q8WV07 137 aa10.64□□□□□ -0.71
VHL-203ENST00000477538 GVQW2A0A096LPI5 108 aaPredicted RBP10.63□□□□□ -0.71
VHL-203ENST00000477538 hDV102S1A0JD36 115 aa10.63□□□□□ -0.71
VHL-203ENST00000477538 EREGO14944 169 aa10.63□□□□□ -0.71
VHL-203ENST00000477538 TMEM223A0PJW6 202 aa10.62□□□□□ -0.71
VHL-203ENST00000477538 SPAG11BQ08648 103 aa10.62□□□□□ -0.71
VHL-203ENST00000477538 Q8N814 137 aa10.62□□□□□ -0.71
VHL-203ENST00000477538 ZNF561-AS1K7EIQ3 104 aa10.61□□□□□ -0.71
VHL-203ENST00000477538 AKR1D1P51857 326 aa10.61□□□□□ -0.71
VHL-203ENST00000477538 SCGB1D1O95968 90 aa10.6□□□□□ -0.71
VHL-203ENST00000477538 LINC00526Q96FQ7 95 aa10.6□□□□□ -0.71
VHL-203ENST00000477538 TOMM7Q9P0U1 55 aa10.6□□□□□ -0.71
VHL-203ENST00000477538 DNAH17Q9UFH2 4485 aa10.6□□□□□ -0.71
VHL-203ENST00000477538 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.59□□□□□ -0.71
VHL-203ENST00000477538 IGLV5-39A0A0G2JS06 123 aa10.59□□□□□ -0.71
VHL-203ENST00000477538 PRSS2P07478 247 aa10.59□□□□□ -0.71
VHL-203ENST00000477538 HERVK_113P61574 105 aa10.59□□□□□ -0.71
VHL-203ENST00000477538 Q8IZM0 81 aa10.59□□□□□ -0.71
VHL-203ENST00000477538 ATOH7Q8N100 152 aa10.59□□□□□ -0.71
VHL-203ENST00000477538 COX7B2Q8TF08 81 aa10.58□□□□□ -0.72
VHL-203ENST00000477538 RYR3Q15413 4870 aa10.57□□□□□ -0.72
VHL-203ENST00000477538 KIAA0087Q14695 138 aa10.57□□□□□ -0.72
VHL-203ENST00000477538 JOSD1Q15040 202 aaPredicted RBP10.56□□□□□ -0.72
VHL-203ENST00000477538 C6orf226Q5I0X4 101 aa10.56□□□□□ -0.72
VHL-203ENST00000477538 STPG4Q8N801 248 aa10.56□□□□□ -0.72
VHL-203ENST00000477538 NTN5Q8WTR8 489 aaPredicted RBP10.56□□□□□ -0.72
VHL-203ENST00000477538 C2orf48Q96LS8 159 aa10.56□□□□□ -0.72
VHL-203ENST00000477538 CAMK2N2Q96S95 79 aa10.55□□□□□ -0.72
VHL-203ENST00000477538 F8WDY8 70 aa10.54□□□□□ -0.72
VHL-203ENST00000477538 LEPROTO15243 131 aa10.54□□□□□ -0.72
VHL-203ENST00000477538 SLPIP03973 132 aa10.54□□□□□ -0.72
VHL-203ENST00000477538 CKS1BP61024 79 aa10.54□□□□□ -0.72
VHL-203ENST00000477538 C2orf82Q6UX34 121 aa10.54□□□□□ -0.72
VHL-203ENST00000477538 PLEKHB2Q96CS7 222 aa10.54□□□□□ -0.72
VHL-203ENST00000477538 A0A1B0GVY2 172 aa10.53□□□□□ -0.72
VHL-203ENST00000477538 E9PLD3 99 aa10.53□□□□□ -0.72
VHL-203ENST00000477538 NDUFA1O15239 70 aa10.53□□□□□ -0.72
VHL-203ENST00000477538 CXCL5P42830 114 aa10.53□□□□□ -0.72
VHL-203ENST00000477538 KRTAP10-2P60368 255 aa10.53□□□□□ -0.72
VHL-203ENST00000477538 CNBPP62633 177 aaKnown RBP10.53□□□□□ -0.72
VHL-203ENST00000477538 SYCNQ0VAF6 134 aa10.53□□□□□ -0.72
VHL-203ENST00000477538 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.52□□□□□ -0.73
VHL-203ENST00000477538 FUSP35637 526 aaKnown RBP eCLIP10.52□□□□□ -0.73
VHL-203ENST00000477538 UNQ6190/PRO20217Q6UXQ8 127 aa10.52□□□□□ -0.73
VHL-203ENST00000477538 Q6ZRU5 148 aa10.52□□□□□ -0.73
VHL-203ENST00000477538 CARD19Q96LW7 228 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms