RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 CCDC168Q8NDH2 2452 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 IGLV4-3A0A075B6K6 122 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 IGLV5-45A0A087WSX0 123 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 IGHV3-64DA0A0J9YX35 117 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 FAM223BA6NKX1 122 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 IBA57-AS1B1ANH7 110 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 BUB1B-PAK6H3BSN5 160 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 C19orf84I3L1E1 186 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 SPRY2O43597 315 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 IGLV1-47P01700 117 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 TFF1P04155 84 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 LINC00315P59091 139 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 RBM3P98179 157 aaKnown RBP3.41□□□□□ -1.86
PTCD3-212ENST00000477520 PIK3CD-AS1Q5SR53 167 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 C20orf197Q8N268 126 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 LINC00308Q8TCZ7 52 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 LINC00846Q9NV44 126 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 CRYBG3Q68DQ2 2970 aa3.41□□□□□ -1.86
PTCD3-212ENST00000477520 SMG1Q96Q15 3661 aaKnown RBP3.41□□□□□ -1.86
PTCD3-212ENST00000477520 UNC79Q9P2D8 2635 aa3.4□□□□□ -1.86
PTCD3-212ENST00000477520 UTP20O75691 2785 aaKnown RBP3.4□□□□□ -1.86
PTCD3-212ENST00000477520 IGHV3-21A0A0B4J1V1 117 aa3.4□□□□□ -1.87
PTCD3-212ENST00000477520 A0A0J9YXV3 536 aa3.4□□□□□ -1.87
PTCD3-212ENST00000477520 SPRY3O43610 288 aa3.4□□□□□ -1.87
PTCD3-212ENST00000477520 IGHV1-46P01743 117 aa3.4□□□□□ -1.87
PTCD3-212ENST00000477520 CTSGP08311 255 aa3.4□□□□□ -1.87
PTCD3-212ENST00000477520 NANOS2P60321 138 aaKnown RBP3.4□□□□□ -1.87
PTCD3-212ENST00000477520 FP248Q71RG6 208 aaPredicted RBP3.4□□□□□ -1.87
PTCD3-212ENST00000477520 FAM19A3Q7Z5A8 133 aa3.4□□□□□ -1.87
PTCD3-212ENST00000477520 FAM19A1Q7Z5A9 133 aa3.4□□□□□ -1.87
PTCD3-212ENST00000477520 CYSTM1Q9H1C7 97 aa3.4□□□□□ -1.87
PTCD3-212ENST00000477520 POLQO75417 2590 aa3.4□□□□□ -1.87
PTCD3-212ENST00000477520 CREBBPQ92793 2442 aa3.4□□□□□ -1.87
PTCD3-212ENST00000477520 RELNP78509 3460 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 ITPR2Q14571 2701 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 TACC2O95359 2948 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 DCHS2Q6V1P9 2916 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 IGKV3D-7A0A0C4DH55 119 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 A0A0U1RRA0 63 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 E7EQL1 145 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 TMEM256-PLSCR3K7ERE1 68 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 CRPP02741 224 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 CD28P10747 220 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 CCL3L1P16619 93 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 EDN2P20800 178 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 CXCL6P80162 114 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 ADAMTSL4-AS1Q5T5F5 129 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 VMO1Q7Z5L0 202 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 ZFAND2AQ8N6M9 145 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 C11orf68Q9H3H3 251 aaKnown RBP3.39□□□□□ -1.87
PTCD3-212ENST00000477520 ORMDL1Q9P0S3 153 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 CELSR2Q9HCU4 2923 aa3.39□□□□□ -1.87
PTCD3-212ENST00000477520 IGLV5-39A0A0G2JS06 123 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 PRAC2D3DTV9 90 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 F5H697 171 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 F6UB75 175 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 M0QY20 66 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 RNASE3P12724 160 aaKnown RBP3.38□□□□□ -1.87
PTCD3-212ENST00000477520 KRTAP10-5P60370 271 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 RPL39P62891 51 aaKnown RBP3.38□□□□□ -1.87
PTCD3-212ENST00000477520 Q6ZTC4 211 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 MRPL55Q7Z7F7 128 aaKnown RBP3.38□□□□□ -1.87
PTCD3-212ENST00000477520 FAM223AQ8IWN6 122 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 DEFB108BQ8NET1 73 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 WFDC11Q8NEX6 87 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 LINC00167Q96N53 147 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 CCL19Q99731 98 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 MOB4Q9Y3A3 225 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 C22orf24Q9Y442 160 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 DSCAML1Q8TD84 2053 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 WNK2Q9Y3S1 2297 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 LRBAP50851 2863 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 APCP25054 2843 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 MED13LQ71F56 2210 aa3.38□□□□□ -1.87
PTCD3-212ENST00000477520 HRNRQ86YZ3 2850 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-212ENST00000477520 TRAV12-3A0A0B4J271 114 aa3.37□□□□□ -1.87
PTCD3-212ENST00000477520 A8MZ25 164 aa3.37□□□□□ -1.87
PTCD3-212ENST00000477520 TRBV12-3P01733 135 aa3.37□□□□□ -1.87
PTCD3-212ENST00000477520 Q1T7F1 81 aa3.37□□□□□ -1.87
PTCD3-212ENST00000477520 ESRGQ1W209 222 aa3.37□□□□□ -1.87
PTCD3-212ENST00000477520 C11orf71Q6IPW1 123 aa3.37□□□□□ -1.87
PTCD3-212ENST00000477520 DPM3Q9P2X0 92 aa3.37□□□□□ -1.87
PTCD3-212ENST00000477520 ASH1LQ9NR48 2969 aaKnown RBP3.37□□□□□ -1.87
PTCD3-212ENST00000477520 MYO9AB2RTY4 2548 aa3.37□□□□□ -1.87
PTCD3-212ENST00000477520 MAP1AP78559 2803 aaPredicted RBP3.37□□□□□ -1.87
PTCD3-212ENST00000477520 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.36□□□□□ -1.873e-9■■■□□ 17.1
PTCD3-212ENST00000477520 TRAV23DV6A0A075B6W5 121 aa3.36□□□□□ -1.87
PTCD3-212ENST00000477520 LOC110117498A0A087WWA1 95 aa3.36□□□□□ -1.87
PTCD3-212ENST00000477520 A0A1W2PPR1 153 aa3.36□□□□□ -1.87
PTCD3-212ENST00000477520 KLLNB2CW77 178 aa3.36□□□□□ -1.87
PTCD3-212ENST00000477520 F8WEM9 126 aa3.36□□□□□ -1.87
PTCD3-212ENST00000477520 MIFP14174 115 aa3.36□□□□□ -1.87
PTCD3-212ENST00000477520 DSCR9P59020 149 aa3.36□□□□□ -1.87
PTCD3-212ENST00000477520 MINOS1Q5TGZ0 78 aa3.36□□□□□ -1.87
PTCD3-212ENST00000477520 Q8N2B8 174 aa3.36□□□□□ -1.87
PTCD3-212ENST00000477520 C14orf132Q9NPU4 83 aa3.36□□□□□ -1.87
PTCD3-212ENST00000477520 ZNRD1Q9P1U0 126 aa3.36□□□□□ -1.87
PTCD3-212ENST00000477520 MINOS1-NBL1R4GNA1 71 aa3.36□□□□□ -1.87
PTCD3-212ENST00000477520 PRRC2AP48634 2157 aaKnown RBP3.35□□□□□ -1.87
PTCD3-212ENST00000477520 MALRD1Q5VYJ5 2156 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms