RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 CRIP3Q6Q6R5 217 aa13.66□□□□□ -0.22
VARS2-209ENST00000477288 C10orf142B7Z368 130 aa13.65□□□□□ -0.22
VARS2-209ENST00000477288 TLN1Q9Y490 2541 aaKnown RBP13.65□□□□□ -0.22
VARS2-209ENST00000477288 TSHBP01222 138 aa13.65□□□□□ -0.22
VARS2-209ENST00000477288 Q6ZS46 218 aa13.65□□□□□ -0.22
VARS2-209ENST00000477288 MBD6Q96DN6 1003 aa13.65□□□□□ -0.22
VARS2-209ENST00000477288 NAV3Q8IVL0 2385 aa13.64□□□□□ -0.23
VARS2-209ENST00000477288 SMR3AQ99954 134 aa13.64□□□□□ -0.23
VARS2-209ENST00000477288 Q6ZVQ6 151 aa13.64□□□□□ -0.23
VARS2-209ENST00000477288 TRBV27A0A0K0K1C4 114 aa13.64□□□□□ -0.23
VARS2-209ENST00000477288 SMIM11BQ8TCY0 68 aa13.64□□□□□ -0.23
VARS2-209ENST00000477288 EIF4EBP1Q13541 118 aaPredicted RBP13.63□□□□□ -0.23
VARS2-209ENST00000477288 HIVEP3Q5T1R4 2406 aa13.63□□□□□ -0.23
VARS2-209ENST00000477288 POM121L12Q8N7R1 296 aa13.62□□□□□ -0.23
VARS2-209ENST00000477288 ZNF73O43830 326 aaPredicted RBP13.6□□□□□ -0.23
VARS2-209ENST00000477288 ZNF295-AS1Q8N0V1 137 aa13.6□□□□□ -0.23
VARS2-209ENST00000477288 PYGO1Q9Y3Y4 419 aa13.6□□□□□ -0.23
VARS2-209ENST00000477288 U3KQK5 164 aa13.6□□□□□ -0.23
VARS2-209ENST00000477288 LINC00474Q9P2X8 69 aa13.6□□□□□ -0.23
VARS2-209ENST00000477288 RNASE3P12724 160 aaKnown RBP13.59□□□□□ -0.23
VARS2-209ENST00000477288 C10orf25Q5T742 122 aa13.59□□□□□ -0.23
VARS2-209ENST00000477288 RETNLBQ9BQ08 111 aa13.59□□□□□ -0.23
VARS2-209ENST00000477288 PRR9Q5T870 116 aa13.59□□□□□ -0.23
VARS2-209ENST00000477288 CIRBP-AS1Q8TBR5 109 aa13.59□□□□□ -0.23
VARS2-209ENST00000477288 NUPR2A6NF83 97 aa13.58□□□□□ -0.24
VARS2-209ENST00000477288 ATP5EP56381 51 aaPredicted RBP13.58□□□□□ -0.24
VARS2-209ENST00000477288 ABCA2Q9BZC7 2435 aa13.58□□□□□ -0.24
VARS2-209ENST00000477288 SERP2Q8N6R1 65 aa13.58□□□□□ -0.24
VARS2-209ENST00000477288 WDR87Q6ZQQ6 2873 aa13.58□□□□□ -0.24
VARS2-209ENST00000477288 NDUFC1O43677 76 aa13.57□□□□□ -0.24
VARS2-209ENST00000477288 CELA1Q9UNI1 258 aa13.57□□□□□ -0.24
VARS2-209ENST00000477288 MYO9AB2RTY4 2548 aa13.57□□□□□ -0.24
VARS2-209ENST00000477288 X6R8D5 127 aa13.57□□□□□ -0.24
VARS2-209ENST00000477288 MRGPRG-AS1Q2M3A8 158 aa13.57□□□□□ -0.24
VARS2-209ENST00000477288 Q8N6K4 173 aa13.57□□□□□ -0.24
VARS2-209ENST00000477288 TIMM17BO60830 172 aa13.57□□□□□ -0.24
VARS2-209ENST00000477288 ESRGQ1W209 222 aa13.56□□□□□ -0.24
VARS2-209ENST00000477288 DSCAMO60469 2012 aa13.56□□□□□ -0.24
VARS2-209ENST00000477288 MUC22E2RYF6 1773 aaPredicted RBP13.56□□□□□ -0.24
VARS2-209ENST00000477288 IGLV1-40P01703 118 aa13.56□□□□□ -0.24
VARS2-209ENST00000477288 M0QXV9 152 aa13.55□□□□□ -0.24
VARS2-209ENST00000477288 CYSRT1A8MQ03 144 aa13.55□□□□□ -0.24
VARS2-209ENST00000477288 NRACQ8N912 160 aa13.55□□□□□ -0.24
VARS2-209ENST00000477288 SORL1Q92673 2214 aa13.54□□□□□ -0.24
VARS2-209ENST00000477288 IGLV2-11P01706 119 aa13.53□□□□□ -0.24
VARS2-209ENST00000477288 ALPK3Q96L96 1907 aa13.53□□□□□ -0.24
VARS2-209ENST00000477288 NDUFA7O95182 113 aa13.53□□□□□ -0.24
VARS2-209ENST00000477288 COX17Q14061 63 aa13.53□□□□□ -0.24
VARS2-209ENST00000477288 LST1O00453 97 aa13.52□□□□□ -0.24
VARS2-209ENST00000477288 C11orf21Q9P2W6 132 aa13.52□□□□□ -0.24
VARS2-209ENST00000477288 KLLNB2CW77 178 aa13.52□□□□□ -0.24
VARS2-209ENST00000477288 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.51□□□□□ -0.25
VARS2-209ENST00000477288 CDSNQ15517 529 aa13.51□□□□□ -0.25
VARS2-209ENST00000477288 RPL28P46779 137 aaKnown RBP13.5□□□□□ -0.25
VARS2-209ENST00000477288 BRI3O95415 125 aa13.5□□□□□ -0.25
VARS2-209ENST00000477288 IGLV5-52A0A0A0MRZ9 124 aa13.5□□□□□ -0.25
VARS2-209ENST00000477288 MRPS36P82909 103 aaKnown RBP13.5□□□□□ -0.25
VARS2-209ENST00000477288 AVPP01185 164 aa13.5□□□□□ -0.25
VARS2-209ENST00000477288 IGHV6-1A0A0B4J1U7 121 aa13.49□□□□□ -0.25
VARS2-209ENST00000477288 Q8IZM0 81 aa13.49□□□□□ -0.25
VARS2-209ENST00000477288 KRTAP10-9P60411 292 aa13.49□□□□□ -0.25
VARS2-209ENST00000477288 CEP192Q8TEP8 1941 aa13.49□□□□□ -0.25
VARS2-209ENST00000477288 EDN2P20800 178 aa13.49□□□□□ -0.25
VARS2-209ENST00000477288 GAS8-AS1O95177 125 aa13.48□□□□□ -0.25
VARS2-209ENST00000477288 C9orf116Q5BN46 136 aaPredicted RBP13.48□□□□□ -0.25
VARS2-209ENST00000477288 UNQ6190/PRO20217Q6UXQ8 127 aa13.48□□□□□ -0.25
VARS2-209ENST00000477288 C2CD3Q4AC94 2353 aa13.48□□□□□ -0.25
VARS2-209ENST00000477288 C6orf223Q8N319 242 aa13.48□□□□□ -0.25
VARS2-209ENST00000477288 CDC42SE2Q9NRR3 84 aa13.47□□□□□ -0.25
VARS2-209ENST00000477288 CCDC179H3BU77 68 aa13.47□□□□□ -0.25
VARS2-209ENST00000477288 Q6Q795 121 aa13.47□□□□□ -0.25
VARS2-209ENST00000477288 REG3GQ6UW15 175 aa13.47□□□□□ -0.25
VARS2-209ENST00000477288 LINC00208Q96KT6 92 aa13.46□□□□□ -0.26
VARS2-209ENST00000477288 PRYO14603 147 aa13.45□□□□□ -0.26
VARS2-209ENST00000477288 SPINK1P00995 79 aa13.45□□□□□ -0.26
VARS2-209ENST00000477288 COX7CP15954 63 aa13.45□□□□□ -0.26
VARS2-209ENST00000477288 PLXNB1O43157 2135 aa13.45□□□□□ -0.26
VARS2-209ENST00000477288 POLR2KP53803 58 aaKnown RBP13.44□□□□□ -0.26
VARS2-209ENST00000477288 C1orf137Q5JT78 98 aa13.44□□□□□ -0.26
VARS2-209ENST00000477288 CEP295Q9C0D2 2601 aa13.44□□□□□ -0.26
VARS2-209ENST00000477288 NTM-AS1Q6ZSK4 140 aa13.43□□□□□ -0.26
VARS2-209ENST00000477288 IMUPQ9GZP8 106 aa13.43□□□□□ -0.26
VARS2-209ENST00000477288 TRBV7-6A0A0J9YX20 115 aa13.43□□□□□ -0.26
VARS2-209ENST00000477288 KIAA1549Q9HCM3 1950 aa13.43□□□□□ -0.26
VARS2-209ENST00000477288 ODF3L2Q3SX64 289 aa13.43□□□□□ -0.26
VARS2-209ENST00000477288 CRIP2P52943 208 aaPredicted RBP13.42□□□□□ -0.26
VARS2-209ENST00000477288 C2orf91Q6ZV80 131 aa13.42□□□□□ -0.26
VARS2-209ENST00000477288 TRBV10-3A0A0K0K1G6 114 aa13.42□□□□□ -0.26
VARS2-209ENST00000477288 LINC01556Q5JQF7 62 aa13.42□□□□□ -0.26
VARS2-209ENST00000477288 PRR3P79522 188 aaKnown RBP13.42□□□□□ -0.26
VARS2-209ENST00000477288 NUP210LQ5VU65 1888 aa13.41□□□□□ -0.26
VARS2-209ENST00000477288 Q6JHZ5 121 aa13.41□□□□□ -0.26
VARS2-209ENST00000477288 Q6ZTC4 211 aa13.41□□□□□ -0.26
VARS2-209ENST00000477288 PCOTHQ58A44 107 aa13.4□□□□□ -0.26
VARS2-209ENST00000477288 SOSTDC1Q6X4U4 206 aa13.4□□□□□ -0.26
VARS2-209ENST00000477288 TANC2Q9HCD6 1990 aa13.39□□□□□ -0.27
VARS2-209ENST00000477288 C1orf195Q5TG92 126 aa13.38□□□□□ -0.27
VARS2-209ENST00000477288 FSHBP01225 129 aa13.38□□□□□ -0.27
VARS2-209ENST00000477288 EGFEM1PQ0D2K5 195 aa13.38□□□□□ -0.27
VARS2-209ENST00000477288 LINC00242Q5T6M2 205 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms