RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ZNF469Q96JG9 3925 aaPredicted RBP11.01□□□□□ -0.65
CLSTN1-205ENST00000477264 IGHV4-59P01825 116 aa11□□□□□ -0.65
CLSTN1-205ENST00000477264 Q8N2B8 174 aa11□□□□□ -0.65
CLSTN1-205ENST00000477264 DGAT2L7PQ6IED9 249 aa11□□□□□ -0.65
CLSTN1-205ENST00000477264 ZNF625Q96I27 306 aaPredicted RBP11□□□□□ -0.65
CLSTN1-205ENST00000477264 FLNAP21333 2647 aaKnown RBP11□□□□□ -0.65
CLSTN1-205ENST00000477264 BAHCC1Q9P281 2608 aa10.99□□□□□ -0.65
CLSTN1-205ENST00000477264 IGHV3-53P01767 116 aa10.99□□□□□ -0.65
CLSTN1-205ENST00000477264 EDN2P20800 178 aa10.99□□□□□ -0.65
CLSTN1-205ENST00000477264 IGHV3-73A0A0B4J1V6 119 aa10.99□□□□□ -0.65
CLSTN1-205ENST00000477264 hADV29S1A0JD25 119 aa10.99□□□□□ -0.65
CLSTN1-205ENST00000477264 SMIM1B2RUZ4 78 aa10.99□□□□□ -0.65
CLSTN1-205ENST00000477264 CRPP02741 224 aa10.99□□□□□ -0.65
CLSTN1-205ENST00000477264 Q6YL49 198 aa10.99□□□□□ -0.65
CLSTN1-205ENST00000477264 FAM218AQ96MZ4 157 aa10.98□□□□□ -0.65
CLSTN1-205ENST00000477264 A8MTW9 85 aa10.97□□□□□ -0.65
CLSTN1-205ENST00000477264 PROK1P58294 105 aa10.97□□□□□ -0.65
CLSTN1-205ENST00000477264 TMEM89A2RUT3 159 aa10.97□□□□□ -0.65
CLSTN1-205ENST00000477264 BLCAPP62952 87 aa10.97□□□□□ -0.65
CLSTN1-205ENST00000477264 LINC00242Q5T6M2 205 aa10.97□□□□□ -0.65
CLSTN1-205ENST00000477264 OBSCN-AS1Q96MR7 158 aa10.97□□□□□ -0.65
CLSTN1-205ENST00000477264 IGHV3OR16-12A0A075B7B8 117 aa10.96□□□□□ -0.65
CLSTN1-205ENST00000477264 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.96□□□□□ -0.65
CLSTN1-205ENST00000477264 COX6A2Q02221 97 aa10.96□□□□□ -0.66
CLSTN1-205ENST00000477264 H0YGX0 51 aa10.95□□□□□ -0.66
CLSTN1-205ENST00000477264 UPK3BQ9BT76 320 aa10.95□□□□□ -0.66
CLSTN1-205ENST00000477264 RBMY1A1P0DJD3 496 aaKnown RBP10.94□□□□□ -0.66
CLSTN1-205ENST00000477264 RBMY1CP0DJD4 496 aa10.94□□□□□ -0.66
CLSTN1-205ENST00000477264 RBMY1FQ15415 496 aaKnown RBP10.94□□□□□ -0.66
CLSTN1-205ENST00000477264 DPH3Q96FX2 82 aa10.94□□□□□ -0.66
CLSTN1-205ENST00000477264 KRTAP1-1Q07627 177 aa10.94□□□□□ -0.66
CLSTN1-205ENST00000477264 TLN2Q9Y4G6 2542 aa10.93□□□□□ -0.66
CLSTN1-205ENST00000477264 PSMB8P28062 276 aa10.93□□□□□ -0.66
CLSTN1-205ENST00000477264 NDUFC2-KCTD14E9PQ53 114 aa10.93□□□□□ -0.66
CLSTN1-205ENST00000477264 Q6ZSN1 163 aa10.93□□□□□ -0.66
CLSTN1-205ENST00000477264 MXRA5Q9NR99 2828 aa10.93□□□□□ -0.66
CLSTN1-205ENST00000477264 AKAP9Q99996 3911 aa10.93□□□□□ -0.66
CLSTN1-205ENST00000477264 TRAV13-1A0A0B4J241 112 aa10.92□□□□□ -0.66
CLSTN1-205ENST00000477264 RS1O15537 224 aa10.92□□□□□ -0.66
CLSTN1-205ENST00000477264 A0A0U1RRA0 63 aa10.92□□□□□ -0.66
CLSTN1-205ENST00000477264 KNCNA6PVL3 124 aa10.92□□□□□ -0.66
CLSTN1-205ENST00000477264 S100A7L2Q5SY68 101 aa10.92□□□□□ -0.66
CLSTN1-205ENST00000477264 ATP5EP2Q5VTU8 51 aa10.92□□□□□ -0.66
CLSTN1-205ENST00000477264 Q9HAA7 133 aa10.92□□□□□ -0.66
CLSTN1-205ENST00000477264 MYO9AB2RTY4 2548 aa10.91□□□□□ -0.66
CLSTN1-205ENST00000477264 TRAV25A0A0B4J276 109 aa10.91□□□□□ -0.66
CLSTN1-205ENST00000477264 F5H768 121 aa10.91□□□□□ -0.66
CLSTN1-205ENST00000477264 IGHV3-38A0A0C4DH36 116 aa10.9□□□□□ -0.66
CLSTN1-205ENST00000477264 USP17L23D6RBM5 183 aa10.9□□□□□ -0.66
CLSTN1-205ENST00000477264 SYNJ2BPP57105 145 aa10.89□□□□□ -0.67
CLSTN1-205ENST00000477264 TMEM86BQ8N661 226 aa10.89□□□□□ -0.67
CLSTN1-205ENST00000477264 C14orf132Q9NPU4 83 aa10.89□□□□□ -0.67
CLSTN1-205ENST00000477264 NOTCH2Q04721 2471 aa10.89□□□□□ -0.67
CLSTN1-205ENST00000477264 ACANP16112 2415 aa10.89□□□□□ -0.67
CLSTN1-205ENST00000477264 Q9UF83 564 aa10.89□□□□□ -0.67
CLSTN1-205ENST00000477264 IGKV3D-7A0A0C4DH55 119 aa10.88□□□□□ -0.67
CLSTN1-205ENST00000477264 HTN1P15515 57 aa10.88□□□□□ -0.67
CLSTN1-205ENST00000477264 LINC00846Q9NV44 126 aa10.88□□□□□ -0.67
CLSTN1-205ENST00000477264 NDUFC2O95298 119 aa10.87□□□□□ -0.67
CLSTN1-205ENST00000477264 LINC00337Q8N6G1 96 aa10.87□□□□□ -0.67
CLSTN1-205ENST00000477264 CYSTM1Q9H1C7 97 aa10.87□□□□□ -0.67
CLSTN1-205ENST00000477264 SND1-IT1Q9HBX3 110 aa10.87□□□□□ -0.67
CLSTN1-205ENST00000477264 SONP18583 2426 aaKnown RBP10.87□□□□□ -0.67
CLSTN1-205ENST00000477264 C11orf72Q8NBR9 251 aa10.87□□□□□ -0.67
CLSTN1-205ENST00000477264 A0A087WYN8 130 aa10.86□□□□□ -0.67
CLSTN1-205ENST00000477264 TRBV10-1A0A0K0K1A3 114 aa10.86□□□□□ -0.67
CLSTN1-205ENST00000477264 LINC01561Q8N1V8 128 aa10.86□□□□□ -0.67
CLSTN1-205ENST00000477264 SMIM11BQ8TCY0 68 aa10.86□□□□□ -0.67
CLSTN1-205ENST00000477264 SMR3AQ99954 134 aa10.86□□□□□ -0.67
CLSTN1-205ENST00000477264 HOXD3P31249 432 aaPredicted RBP10.86□□□□□ -0.67
CLSTN1-205ENST00000477264 ZNF702PQ9H963 129 aa10.86□□□□□ -0.67
CLSTN1-205ENST00000477264 IGKV2-28A0A075B6P5 120 aa10.85□□□□□ -0.67
CLSTN1-205ENST00000477264 IGKV2D-28P01615 120 aa10.85□□□□□ -0.67
CLSTN1-205ENST00000477264 KIR2DL5BQ8NHK3 375 aa10.85□□□□□ -0.67
CLSTN1-205ENST00000477264 DNAJC9-AS1A6NH13 148 aa10.84□□□□□ -0.67
CLSTN1-205ENST00000477264 LY6G6DO95868 133 aa10.84□□□□□ -0.67
CLSTN1-205ENST00000477264 RPL36AP83881 106 aaKnown RBP10.84□□□□□ -0.67
CLSTN1-205ENST00000477264 RPL36ALQ969Q0 106 aaKnown RBP10.84□□□□□ -0.67
CLSTN1-205ENST00000477264 CDC42SE2Q9NRR3 84 aa10.84□□□□□ -0.67
CLSTN1-205ENST00000477264 MIR7-3HGQ8N6C7 128 aa10.84□□□□□ -0.67
CLSTN1-205ENST00000477264 COX7B2Q8TF08 81 aa10.84□□□□□ -0.67
CLSTN1-205ENST00000477264 INSP01308 110 aa10.83□□□□□ -0.68
CLSTN1-205ENST00000477264 DEFB131AP59861 70 aa10.83□□□□□ -0.68
CLSTN1-205ENST00000477264 RBMY1BA6NDE4 496 aaKnown RBP10.83□□□□□ -0.68
CLSTN1-205ENST00000477264 RBMY1EA6NEQ0 496 aaKnown RBP10.83□□□□□ -0.68
CLSTN1-205ENST00000477264 CCKP06307 115 aa10.83□□□□□ -0.68
CLSTN1-205ENST00000477264 RBMY1DP0C7P1 496 aaKnown RBP10.83□□□□□ -0.68
CLSTN1-205ENST00000477264 OTOGQ6ZRI0 2925 aa10.83□□□□□ -0.68
CLSTN1-205ENST00000477264 DSCR8Q96T75 97 aa10.82□□□□□ -0.68
CLSTN1-205ENST00000477264 ORMDL1Q9P0S3 153 aa10.82□□□□□ -0.68
CLSTN1-205ENST00000477264 A0A087WVE0 104 aa10.81□□□□□ -0.68
CLSTN1-205ENST00000477264 TRBV10-3A0A0K0K1G6 114 aa10.81□□□□□ -0.68
CLSTN1-205ENST00000477264 JMJD7-PLA2G4BH0Y9G9 81 aa10.81□□□□□ -0.68
CLSTN1-205ENST00000477264 K7EQD1 137 aa10.81□□□□□ -0.68
CLSTN1-205ENST00000477264 LECT2O14960 151 aa10.81□□□□□ -0.68
CLSTN1-205ENST00000477264 IBA57-AS1B1ANH7 110 aa10.8□□□□□ -0.68
CLSTN1-205ENST00000477264 BCE1O60756 84 aa10.8□□□□□ -0.68
CLSTN1-205ENST00000477264 C9orf129Q5T035 196 aaKnown RBP10.8□□□□□ -0.68
CLSTN1-205ENST00000477264 ESM1Q9NQ30 184 aa10.8□□□□□ -0.68
CLSTN1-205ENST00000477264 HIVEP2P31629 2446 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms