RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, human

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GMDS-204	ENST00000476972	C5orf38	Q86SI9	138 aa		12.08	□□□□□ -0.48
GMDS-204	ENST00000476972	IGLV4-69	A0A075B6H9	119 aa		12.07	□□□□□ -0.48
GMDS-204	ENST00000476972	IFITM10	A6NMD0	228 aa		12.07	□□□□□ -0.48
GMDS-204	ENST00000476972	IFI27	P40305	119 aa	Predicted RBP	12.07	□□□□□ -0.48
GMDS-204	ENST00000476972		Q8N8P6	123 aa		12.07	□□□□□ -0.48
GMDS-204	ENST00000476972		A0A096LNI7	61 aa		12.06	□□□□□ -0.48
GMDS-204	ENST00000476972	SYCN	Q0VAF6	134 aa		12.06	□□□□□ -0.48
GMDS-204	ENST00000476972	MAJIN	Q3KP22	176 aa		12.06	□□□□□ -0.48
GMDS-204	ENST00000476972	PLAC8	Q9NZF1	115 aa		12.06	□□□□□ -0.48
GMDS-204	ENST00000476972	PYGO1	Q9Y3Y4	419 aa		12.06	□□□□□ -0.48
GMDS-204	ENST00000476972	IGLV4-3	A0A075B6K6	122 aa		12.05	□□□□□ -0.48
GMDS-204	ENST00000476972	TRAV9-1	A0A075B6T8	112 aa		12.05	□□□□□ -0.48
GMDS-204	ENST00000476972	APOM	O95445	188 aa		12.04	□□□□□ -0.48
GMDS-204	ENST00000476972	PKIG	Q9Y2B9	76 aa		12.04	□□□□□ -0.48
GMDS-204	ENST00000476972	IGHV3OR16-9	A0A0B4J2B5	98 aa		12.03	□□□□□ -0.48
GMDS-204	ENST00000476972	SPAG11B	Q08648	103 aa		12.03	□□□□□ -0.48
GMDS-204	ENST00000476972	KIAA1644	Q3SXP7	199 aa		12.03	□□□□□ -0.48
GMDS-204	ENST00000476972	C2orf66	Q6UXQ4	117 aa		12.03	□□□□□ -0.48
GMDS-204	ENST00000476972		Q6ZRU5	148 aa		12.03	□□□□□ -0.48
GMDS-204	ENST00000476972	S100P	P25815	95 aa		12.02	□□□□□ -0.49
GMDS-204	ENST00000476972	ORMDL2	Q53FV1	153 aa		12.02	□□□□□ -0.49
GMDS-204	ENST00000476972	C10orf91	Q5T1B1	145 aa		12.02	□□□□□ -0.49
GMDS-204	ENST00000476972	STPG4	Q8N801	248 aa		12.02	□□□□□ -0.49
GMDS-204	ENST00000476972	TMEM141	Q96I45	108 aa		12.02	□□□□□ -0.49
GMDS-204	ENST00000476972	CAMK2N2	Q96S95	79 aa		12.02	□□□□□ -0.49
GMDS-204	ENST00000476972	NXT2	Q9NPJ8	142 aa	Known RBP	12.02	□□□□□ -0.49
GMDS-204	ENST00000476972	CYSLTR1	Q9Y271	337 aa		12.02	□□□□□ -0.49
GMDS-204	ENST00000476972	C2orf48	Q96LS8	159 aa		12.01	□□□□□ -0.49
GMDS-204	ENST00000476972		K7EMI3	77 aa		12	□□□□□ -0.49
GMDS-204	ENST00000476972	OR10D4P	Q8NGN7	298 aa		12	□□□□□ -0.49
GMDS-204	ENST00000476972	ORAOV1	Q8WV07	137 aa		12	□□□□□ -0.49
GMDS-204	ENST00000476972	LINC00474	Q9P2X8	69 aa		12	□□□□□ -0.49
GMDS-204	ENST00000476972	CARHSP1	Q9Y2V2	147 aa	Known RBP	12	□□□□□ -0.49
GMDS-204	ENST00000476972	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.99	□□□□□ -0.49
GMDS-204	ENST00000476972	MT1HL1	P0DM35	61 aa		11.99	□□□□□ -0.49
GMDS-204	ENST00000476972	TEX43	Q6ZNM6	134 aa		11.99	□□□□□ -0.49
GMDS-204	ENST00000476972	LOC107984640	A0A0U1RRK4	108 aa		11.98	□□□□□ -0.49
GMDS-204	ENST00000476972	RHEB	Q15382	184 aa		11.98	□□□□□ -0.49
GMDS-204	ENST00000476972	LINC00242	Q5T6M2	205 aa		11.98	□□□□□ -0.49
GMDS-204	ENST00000476972	ZC2HC1B	Q5TFG8	222 aa		11.98	□□□□□ -0.49
GMDS-204	ENST00000476972	LINC00173	Q6ZV60	143 aa		11.98	□□□□□ -0.49
GMDS-204	ENST00000476972	C7orf33	Q8WU49	177 aa		11.98	□□□□□ -0.49
GMDS-204	ENST00000476972	GNB1L	Q9BYB4	327 aa		11.98	□□□□□ -0.49
GMDS-204	ENST00000476972	UBE2D1	P51668	147 aa		11.97	□□□□□ -0.49
GMDS-204	ENST00000476972	PTTG1IP	P53801	180 aa		11.97	□□□□□ -0.49
GMDS-204	ENST00000476972		Q6ZN92	141 aa		11.97	□□□□□ -0.49
GMDS-204	ENST00000476972	C2orf88	Q9BSF0	95 aa		11.97	□□□□□ -0.49
GMDS-204	ENST00000476972	RPS10P5	Q9NQ39	176 aa		11.97	□□□□□ -0.49
GMDS-204	ENST00000476972	IGIP	A6NJ69	53 aa		11.96	□□□□□ -0.49
GMDS-204	ENST00000476972	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.96	□□□□□ -0.49
GMDS-204	ENST00000476972	GAGE2B	Q13066	116 aa		11.96	□□□□□ -0.49
GMDS-204	ENST00000476972	AMELX	Q99217	191 aa		11.96	□□□□□ -0.49
GMDS-204	ENST00000476972		A0A087WZ39	114 aa		11.95	□□□□□ -0.5
GMDS-204	ENST00000476972	NPS	P0C0P6	89 aa		11.95	□□□□□ -0.5
GMDS-204	ENST00000476972		A0A0J9YXV3	536 aa		11.94	□□□□□ -0.5
GMDS-204	ENST00000476972	COX19	Q49B96	90 aa		11.94	□□□□□ -0.5
GMDS-204	ENST00000476972	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.94	□□□□□ -0.5
GMDS-204	ENST00000476972	VCX2	Q9H322	139 aa		11.94	□□□□□ -0.5
GMDS-204	ENST00000476972		F8WDY8	70 aa		11.93	□□□□□ -0.5
GMDS-204	ENST00000476972	RPL18A	Q02543	176 aa	Known RBP	11.93	□□□□□ -0.5
GMDS-204	ENST00000476972	RNF151	Q2KHN1	245 aa		11.93	□□□□□ -0.5
GMDS-204	ENST00000476972	MRPL35	Q9NZE8	188 aa	Known RBP	11.93	□□□□□ -0.5
GMDS-204	ENST00000476972	NDUFA1	O15239	70 aa		11.92	□□□□□ -0.5
GMDS-204	ENST00000476972	MT-ND6	P03923	174 aa		11.92	□□□□□ -0.5
GMDS-204	ENST00000476972	G0S2	P27469	103 aa		11.92	□□□□□ -0.5
GMDS-204	ENST00000476972	C10orf25	Q5T742	122 aa		11.92	□□□□□ -0.5
GMDS-204	ENST00000476972	TOMM6	Q96B49	74 aa		11.92	□□□□□ -0.5
GMDS-204	ENST00000476972	MRPL18	Q9H0U6	180 aa	Known RBP	11.92	□□□□□ -0.5
GMDS-204	ENST00000476972	TIMM17A	Q99595	171 aa		11.91	□□□□□ -0.5
GMDS-204	ENST00000476972	PRR3	P79522	188 aa	Known RBP	11.9	□□□□□ -0.5
GMDS-204	ENST00000476972	FABP9	Q0Z7S8	132 aa		11.9	□□□□□ -0.5
GMDS-204	ENST00000476972	KIAA0087	Q14695	138 aa		11.9	□□□□□ -0.5
GMDS-204	ENST00000476972	UNQ6190/PRO20217	Q6UXQ8	127 aa		11.9	□□□□□ -0.5
GMDS-204	ENST00000476972	LINC01546	A6NGU7	62 aa		11.89	□□□□□ -0.51
GMDS-204	ENST00000476972	PAPPA-AS1	Q5QFB9	102 aa		11.89	□□□□□ -0.51
GMDS-204	ENST00000476972	LINC01561	Q8N1V8	128 aa		11.89	□□□□□ -0.51
GMDS-204	ENST00000476972	C6orf48	Q9UBA6	75 aa		11.89	□□□□□ -0.51
GMDS-204	ENST00000476972		A0A1W2PNN7	141 aa		11.88	□□□□□ -0.51
GMDS-204	ENST00000476972	APOC3	P02656	99 aa		11.88	□□□□□ -0.51
GMDS-204	ENST00000476972	LRP2	P98164	4655 aa		11.88	□□□□□ -0.51
GMDS-204	ENST00000476972	FAM19A3	Q7Z5A8	133 aa		11.88	□□□□□ -0.51
GMDS-204	ENST00000476972	ERAS	Q7Z444	233 aa		11.87	□□□□□ -0.51
GMDS-204	ENST00000476972	SCGB3A1	Q96QR1	104 aa		11.87	□□□□□ -0.51
GMDS-204	ENST00000476972	C9orf116	Q5BN46	136 aa	Predicted RBP	11.86	□□□□□ -0.51
GMDS-204	ENST00000476972	FA2H	Q7L5A8	372 aa		11.86	□□□□□ -0.51
GMDS-204	ENST00000476972	TNXB	P22105	4242 aa		11.86	□□□□□ -0.51
GMDS-204	ENST00000476972	RNF213	Q63HN8	5207 aa		11.85	□□□□□ -0.51
GMDS-204	ENST00000476972	TLX1NB	P0CAT3	122 aa		11.85	□□□□□ -0.51
GMDS-204	ENST00000476972	HERVK_113	P63121	156 aa		11.85	□□□□□ -0.51
GMDS-204	ENST00000476972	NDUFA5	Q16718	116 aa		11.85	□□□□□ -0.51
GMDS-204	ENST00000476972	C2orf82	Q6UX34	121 aa		11.85	□□□□□ -0.51
GMDS-204	ENST00000476972	SVBP	Q8N300	66 aa		11.85	□□□□□ -0.51
GMDS-204	ENST00000476972	SNAPIN	O95295	136 aa		11.84	□□□□□ -0.51
GMDS-204	ENST00000476972	SEC11A	P67812	179 aa		11.84	□□□□□ -0.51
GMDS-204	ENST00000476972		Q6ZRP5	223 aa		11.84	□□□□□ -0.51
GMDS-204	ENST00000476972	GEMIN7	Q9H840	131 aa	Known RBP	11.84	□□□□□ -0.51
GMDS-204	ENST00000476972	SMCO4	Q9NRQ5	59 aa		11.84	□□□□□ -0.51
GMDS-204	ENST00000476972	CDKN2A-AS1	Q9UH64	79 aa		11.84	□□□□□ -0.51
GMDS-204	ENST00000476972	TRBV30	A0A0K0K1B3	111 aa		11.83	□□□□□ -0.52
GMDS-204	ENST00000476972	LINC01549	A6NIU2	74 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms