RNA–Protein interactions for RNA: ENST00000476791.1

SPTLC3-205, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 1 (best)

Gene SPTLC3, Length 2,480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-205ENST00000476791 UTRNP46939 3433 aa3.9□□□□□ -1.79
SPTLC3-205ENST00000476791 NCR3O14931 201 aa3.9□□□□□ -1.79
SPTLC3-205ENST00000476791 IGKV1-17P01599 117 aa3.9□□□□□ -1.79
SPTLC3-205ENST00000476791 IGHV1-46P01743 117 aa3.9□□□□□ -1.79
SPTLC3-205ENST00000476791 PATE4P0C8F1 98 aa3.9□□□□□ -1.79
SPTLC3-205ENST00000476791 PRR4Q16378 134 aa3.9□□□□□ -1.79
SPTLC3-205ENST00000476791 OCR1Q9BZK8 76 aa3.9□□□□□ -1.79
SPTLC3-205ENST00000476791 TNRC6BQ9UPQ9 1833 aaKnown RBP3.9□□□□□ -1.79
SPTLC3-205ENST00000476791 IGHV1-3A0A0C4DH29 117 aa3.89□□□□□ -1.79
SPTLC3-205ENST00000476791 BPY2O14599 106 aa3.89□□□□□ -1.79
SPTLC3-205ENST00000476791 DEFB113Q30KQ7 82 aa3.89□□□□□ -1.79
SPTLC3-205ENST00000476791 TMEM14CQ9P0S9 112 aa3.89□□□□□ -1.79
SPTLC3-205ENST00000476791 IGKV3D-11A0A0A0MRZ8 115 aa3.89□□□□□ -1.79
SPTLC3-205ENST00000476791 LITAFQ99732 161 aa3.89□□□□□ -1.79
SPTLC3-205ENST00000476791 CACNA1AO00555 2505 aa3.89□□□□□ -1.79
SPTLC3-205ENST00000476791 SORL1Q92673 2214 aa3.89□□□□□ -1.79
SPTLC3-205ENST00000476791 LINC00483Q53H64 154 aa3.88□□□□□ -1.79
SPTLC3-205ENST00000476791 NPBQ8NG41 125 aa3.88□□□□□ -1.79
SPTLC3-205ENST00000476791 R4GMQ9 66 aa3.88□□□□□ -1.79
SPTLC3-205ENST00000476791 IGLV4-69A0A075B6H9 119 aa3.88□□□□□ -1.79
SPTLC3-205ENST00000476791 IGHV3-15A0A0B4J1V0 119 aa3.88□□□□□ -1.79
SPTLC3-205ENST00000476791 IGHV3-73A0A0B4J1V6 119 aa3.88□□□□□ -1.79
SPTLC3-205ENST00000476791 PLCE1Q9P212 2302 aa3.88□□□□□ -1.79
SPTLC3-205ENST00000476791 IGHV3-49A0A0A0MS15 119 aa3.87□□□□□ -1.79
SPTLC3-205ENST00000476791 PPP1R17O96001 155 aa3.87□□□□□ -1.79
SPTLC3-205ENST00000476791 LINC00167Q96N53 147 aa3.87□□□□□ -1.79
SPTLC3-205ENST00000476791 PRB3Q04118 309 aaPredicted RBP3.87□□□□□ -1.79
SPTLC3-205ENST00000476791 C7orf33Q8WU49 177 aa3.87□□□□□ -1.79
SPTLC3-205ENST00000476791 CAMK2N2Q96S95 79 aa3.87□□□□□ -1.79
SPTLC3-205ENST00000476791 ORMDL1Q9P0S3 153 aa3.87□□□□□ -1.79
SPTLC3-205ENST00000476791 A8MUU9 505 aa3.86□□□□□ -1.79
SPTLC3-205ENST00000476791 TLX1NBP0CAT3 122 aa3.86□□□□□ -1.79
SPTLC3-205ENST00000476791 A0A0J9YX75 114 aa3.86□□□□□ -1.79
SPTLC3-205ENST00000476791 TRBV10-1A0A0K0K1A3 114 aa3.86□□□□□ -1.79
SPTLC3-205ENST00000476791 SPINK9Q5DT21 86 aa3.86□□□□□ -1.79
SPTLC3-205ENST00000476791 NTM-AS1Q6ZSK4 140 aa3.86□□□□□ -1.79
SPTLC3-205ENST00000476791 MIR7-3HGQ8N6C7 128 aa3.86□□□□□ -1.79
SPTLC3-205ENST00000476791 ZCCHC13Q8WW36 166 aaKnown RBP3.86□□□□□ -1.79
SPTLC3-205ENST00000476791 K7ERS5 55 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 DNAH10OSP0CZ25 163 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 CASC10Q5T4H9 136 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 Q6ZTI0 123 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 FAM215AQ9Y5M1 114 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 COL6A3P12111 3177 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 IGKV1D-37A0A075B6S9 117 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 IGKV1OR2-108A0A075B7D4 117 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 IGHV7-4-1A0A0J9YVY3 117 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 HAMPP81172 84 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 SPAG11BQ08648 103 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 SPAG11AQ6PDA7 123 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 PLAC8Q9NZF1 115 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 MINOS1-NBL1R4GNA1 71 aa3.85□□□□□ -1.79
SPTLC3-205ENST00000476791 SEC16AO15027 2179 aa3.84□□□□□ -1.79
SPTLC3-205ENST00000476791 IGLV5-37A0A075B6J1 123 aa3.84□□□□□ -1.8
SPTLC3-205ENST00000476791 IGHV4-4A0A075B6R2 117 aa3.83□□□□□ -1.8
SPTLC3-205ENST00000476791 LINC00208Q96KT6 92 aa3.83□□□□□ -1.8
SPTLC3-205ENST00000476791 LCE6AA0A183 80 aa3.83□□□□□ -1.8
SPTLC3-205ENST00000476791 A0A1B0GVX0 72 aa3.83□□□□□ -1.8
SPTLC3-205ENST00000476791 IGKV3-20P01619 116 aa3.83□□□□□ -1.8
SPTLC3-205ENST00000476791 P0C879 139 aa3.83□□□□□ -1.8
SPTLC3-205ENST00000476791 SMIM29Q86T20 159 aa3.83□□□□□ -1.8
SPTLC3-205ENST00000476791 MUC7Q8TAX7 377 aa3.83□□□□□ -1.8
SPTLC3-205ENST00000476791 Q86TA4 180 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 Q9BRP9 147 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 CEP290O15078 2479 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 TTC28Q96AY4 2481 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 MED13LQ71F56 2210 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 IGLV8-61A0A075B6I0 122 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 IGLV4-3A0A075B6K6 122 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 A6NDX4 124 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 MSMBP08118 114 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 DEFB106AQ8N104 65 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 Q8N9W7 124 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 PRR34Q9NV39 138 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 MRPL36Q9P0J6 103 aaKnown RBP3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 LINC01558Q9Y6Z2 57 aa3.82□□□□□ -1.8
SPTLC3-205ENST00000476791 A0A087WYN8 130 aa3.81□□□□□ -1.8
SPTLC3-205ENST00000476791 ELOF1P60002 83 aaKnown RBP3.81□□□□□ -1.8
SPTLC3-205ENST00000476791 MRPS21P82921 87 aaKnown RBP3.81□□□□□ -1.8
SPTLC3-205ENST00000476791 SPINK14Q6IE38 97 aa3.81□□□□□ -1.8
SPTLC3-205ENST00000476791 ZNF318Q5VUA4 2279 aa3.81□□□□□ -1.8
SPTLC3-205ENST00000476791 IGKV3D-15A0A087WSY6 115 aa3.81□□□□□ -1.8
SPTLC3-205ENST00000476791 LINC00467Q9BRT7 94 aa3.81□□□□□ -1.8
SPTLC3-205ENST00000476791 GOLGB1Q14789 3259 aaKnown RBP3.81□□□□□ -1.8
SPTLC3-205ENST00000476791 PTPRQQ9UMZ3 2332 aa3.81□□□□□ -1.8
SPTLC3-205ENST00000476791 IGHV3-64A0A075B6Q5 118 aa3.8□□□□□ -1.8
SPTLC3-205ENST00000476791 IGHV1-18A0A0C4DH31 117 aa3.8□□□□□ -1.8
SPTLC3-205ENST00000476791 TRBV6-1A0A0K0K1D8 114 aa3.8□□□□□ -1.8
SPTLC3-205ENST00000476791 CRIP1P50238 77 aa3.8□□□□□ -1.8
SPTLC3-205ENST00000476791 MUC6Q6W4X9 2439 aa3.8□□□□□ -1.8
SPTLC3-205ENST00000476791 IGHV4-30-2A0A087WSY4 118 aa3.8□□□□□ -1.8
SPTLC3-205ENST00000476791 IGHV3-23P01764 117 aa3.8□□□□□ -1.8
SPTLC3-205ENST00000476791 CNBPP62633 177 aaKnown RBP3.8□□□□□ -1.8
SPTLC3-205ENST00000476791 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
SPTLC3-205ENST00000476791 F5P12259 2224 aa3.8□□□□□ -1.8
SPTLC3-205ENST00000476791 RNASE3P12724 160 aaKnown RBP3.79□□□□□ -1.8
SPTLC3-205ENST00000476791 C2orf66Q6UXQ4 117 aa3.79□□□□□ -1.8
SPTLC3-205ENST00000476791 NCOR1O75376 2440 aa3.79□□□□□ -1.8
SPTLC3-205ENST00000476791 IGKV2-29A2NJV5 120 aaPredicted RBP3.79□□□□□ -1.8
SPTLC3-205ENST00000476791 IGHV3-53P01767 116 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 237.3 ms