RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 DEFB132Q7Z7B7 95 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 CHCHD10Q8WYQ3 142 aaPredicted RBP2.85□□□□□ -1.95
CD55-208ENST00000476590 SND1-IT1Q9HBX3 110 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 ZNF706Q9Y5V0 76 aaPredicted RBP2.85□□□□□ -1.95
CD55-208ENST00000476590 PCNTO95613 3336 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 IGLV3-9A0A075B6K5 115 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 C19orf84I3L1E1 186 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 ATP6V0E1O15342 81 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 CCL3P10147 92 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 RNASE3P12724 160 aaKnown RBP2.85□□□□□ -1.95
CD55-208ENST00000476590 ELOF1P60002 83 aaKnown RBP2.85□□□□□ -1.95
CD55-208ENST00000476590 LMO4P61968 165 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 Q8N814 137 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 ZCCHC13Q8WW36 166 aaKnown RBP2.85□□□□□ -1.95
CD55-208ENST00000476590 FAM104AQ969W3 186 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 ZNRD1Q9P1U0 126 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 CDKN2A-AS1Q9UH64 79 aa2.85□□□□□ -1.95
CD55-208ENST00000476590 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.84□□□□□ -1.95
CD55-208ENST00000476590 IGHV4-28A0A0C4DH34 117 aa2.84□□□□□ -1.95
CD55-208ENST00000476590 M0QY20 66 aa2.84□□□□□ -1.95
CD55-208ENST00000476590 PRR9Q5T870 116 aa2.84□□□□□ -1.95
CD55-208ENST00000476590 C9orf66Q5T8R8 295 aa2.84□□□□□ -1.95
CD55-208ENST00000476590 DNAJC13O75165 2243 aa2.84□□□□□ -1.96
CD55-208ENST00000476590 NDUFB1O75438 58 aa2.84□□□□□ -1.96
CD55-208ENST00000476590 CCL14Q16627 93 aa2.84□□□□□ -1.96
CD55-208ENST00000476590 CASC2Q6XLA1 102 aa2.84□□□□□ -1.96
CD55-208ENST00000476590 NTM-AS1Q6ZSK4 140 aa2.84□□□□□ -1.96
CD55-208ENST00000476590 KLK9Q9UKQ9 250 aa2.84□□□□□ -1.96
CD55-208ENST00000476590 BRWD1Q9NSI6 2320 aa2.84□□□□□ -1.96
CD55-208ENST00000476590 PRRC2BQ5JSZ5 2229 aaKnown RBP2.84□□□□□ -1.96
CD55-208ENST00000476590 ASCC3Q8N3C0 2202 aaKnown RBP2.84□□□□□ -1.96
CD55-208ENST00000476590 CNTRLQ7Z7A1 2325 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 A0A087X002 238 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 IGHV3OR16-9A0A0B4J2B5 98 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 CLPSL1A2RUU4 121 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 LY6G6DO95868 133 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 ZFAND2AQ8N6M9 145 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 Q9BRP9 147 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 CELA1Q9UNI1 258 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 H3BQ85 93 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 PRB1P04280 392 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 IGKV4-1P06312 121 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 NANOS2P60321 138 aaKnown RBP2.83□□□□□ -1.96
CD55-208ENST00000476590 PRR3P79522 188 aaKnown RBP2.83□□□□□ -1.96
CD55-208ENST00000476590 REG3GQ6UW15 175 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 SCXQ7RTU7 201 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 F5P12259 2224 aa2.83□□□□□ -1.96
CD55-208ENST00000476590 IGHV3-49A0A0A0MS15 119 aa2.82□□□□□ -1.96
CD55-208ENST00000476590 IGHV6-1A0A0B4J1U7 121 aa2.82□□□□□ -1.96
CD55-208ENST00000476590 SMIM1B2RUZ4 78 aa2.82□□□□□ -1.96
CD55-208ENST00000476590 K7EQD1 137 aa2.82□□□□□ -1.96
CD55-208ENST00000476590 M0R2N4 97 aa2.82□□□□□ -1.96
CD55-208ENST00000476590 IGHV4-30-4P0DP06 118 aa2.82□□□□□ -1.96
CD55-208ENST00000476590 PRB3Q04118 309 aaPredicted RBP2.82□□□□□ -1.96
CD55-208ENST00000476590 LINC00242Q5T6M2 205 aa2.82□□□□□ -1.96
CD55-208ENST00000476590 Q6ZSN1 163 aa2.82□□□□□ -1.96
CD55-208ENST00000476590 LINC00208Q96KT6 92 aa2.82□□□□□ -1.96
CD55-208ENST00000476590 B9D2Q9BPU9 175 aa2.82□□□□□ -1.96
CD55-208ENST00000476590 PINLYPA6NC86 204 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 DEFB114Q30KQ6 69 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 FAM74A4Q5TZK3 123 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 GAFA1Q96PS6 74 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 RETNLBQ9BQ08 111 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 CENPFP49454 3210 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 IGLV11-55A0A075B6I3 123 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 TRBV6-4A0A1B0GX49 114 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 CCL18P55774 89 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 KRTAP10-11P60412 298 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 FBXL19-AS1Q494R0 122 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 S4R3C0 116 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 MUC4Q99102 2169 aa2.81□□□□□ -1.96
CD55-208ENST00000476590 ZNF318Q5VUA4 2279 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 IGHV3-72A0A0B4J1Y9 119 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 IGHV1-3A0A0C4DH29 117 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 SPTY2D1-AS1A0A0U1RR47 76 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 IGHV1-8P0DP01 117 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 MUC7Q8TAX7 377 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 RNF5Q99942 180 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 SRCAPQ6ZRS2 3230 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 IGLV4-60A0A075B6I1 120 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 B4DSR2 109 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 INAFM1C9JVW0 142 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 COX6A2Q02221 97 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 PRR4Q16378 134 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 SPANXA2-OT1Q8N9U9 137 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 LINC01006Q8NI28 216 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 COX7B2Q8TF08 81 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 CHCHD7Q9BUK0 85 aa2.8□□□□□ -1.96
CD55-208ENST00000476590 NDUFA4O00483 81 aa2.79□□□□□ -1.96
CD55-208ENST00000476590 CCL3L1P16619 93 aa2.79□□□□□ -1.96
CD55-208ENST00000476590 LINC00158P58513 81 aa2.79□□□□□ -1.96
CD55-208ENST00000476590 BSPH1Q075Z2 132 aa2.79□□□□□ -1.96
CD55-208ENST00000476590 LINC00476Q8WZB0 136 aa2.79□□□□□ -1.96
CD55-208ENST00000476590 PTPRQQ9UMZ3 2332 aa2.79□□□□□ -1.96
CD55-208ENST00000476590 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.78□□□□□ -1.96
CD55-208ENST00000476590 TRGV2A0A075B6R0 118 aa2.78□□□□□ -1.96
CD55-208ENST00000476590 IGHV3-73A0A0B4J1V6 119 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms