RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 Q6ZN92 141 aa13.53□□□□□ -0.24
MAP1LC3A-204ENST00000476428 LINC00173Q6ZV60 143 aa13.53□□□□□ -0.24
MAP1LC3A-204ENST00000476428 LINC00526Q96FQ7 95 aa13.53□□□□□ -0.24
MAP1LC3A-204ENST00000476428 VCX2Q9H322 139 aa13.53□□□□□ -0.24
MAP1LC3A-204ENST00000476428 IGHV3OR16-9A0A0B4J2B5 98 aa13.52□□□□□ -0.25
MAP1LC3A-204ENST00000476428 SDIM1Q6ZPB5 146 aa13.52□□□□□ -0.25
MAP1LC3A-204ENST00000476428 Q8N1X5 172 aa13.52□□□□□ -0.25
MAP1LC3A-204ENST00000476428 URB1-AS1Q96HZ7 61 aa13.52□□□□□ -0.25
MAP1LC3A-204ENST00000476428 TIMM17AQ99595 171 aa13.52□□□□□ -0.25
MAP1LC3A-204ENST00000476428 UBE2D1P51668 147 aa13.51□□□□□ -0.25
MAP1LC3A-204ENST00000476428 LINC00242Q5T6M2 205 aa13.51□□□□□ -0.25
MAP1LC3A-204ENST00000476428 ERASQ7Z444 233 aa13.51□□□□□ -0.25
MAP1LC3A-204ENST00000476428 SCGB3A1Q96QR1 104 aa13.51□□□□□ -0.25
MAP1LC3A-204ENST00000476428 LINC00614P0C842 121 aa13.5□□□□□ -0.25
MAP1LC3A-204ENST00000476428 COX6A2Q02221 97 aa13.5□□□□□ -0.25
MAP1LC3A-204ENST00000476428 C2orf88Q9BSF0 95 aa13.5□□□□□ -0.25
MAP1LC3A-204ENST00000476428 ZNF561-AS1K7EIQ3 104 aa13.49□□□□□ -0.25
MAP1LC3A-204ENST00000476428 SMR3BP02814 79 aaPredicted RBP13.49□□□□□ -0.25
MAP1LC3A-204ENST00000476428 PAPPA-AS1Q5QFB9 102 aa13.49□□□□□ -0.25
MAP1LC3A-204ENST00000476428 HERC1Q15751 4861 aa13.48□□□□□ -0.25
MAP1LC3A-204ENST00000476428 IGHV3-64A0A075B6Q5 118 aa13.48□□□□□ -0.25
MAP1LC3A-204ENST00000476428 LINC01549A6NIU2 74 aa13.48□□□□□ -0.25
MAP1LC3A-204ENST00000476428 APOMO95445 188 aa13.47□□□□□ -0.25
MAP1LC3A-204ENST00000476428 CHAC1Q9BUX1 264 aa13.47□□□□□ -0.25
MAP1LC3A-204ENST00000476428 IGLV4-69A0A075B6H9 119 aa13.46□□□□□ -0.25
MAP1LC3A-204ENST00000476428 SCXQ7RTU7 201 aa13.46□□□□□ -0.25
MAP1LC3A-204ENST00000476428 A0A096LNJ9 63 aa13.45□□□□□ -0.26
MAP1LC3A-204ENST00000476428 COLCA2A8K830 154 aa13.45□□□□□ -0.26
MAP1LC3A-204ENST00000476428 RAB5BP61020 215 aa13.45□□□□□ -0.26
MAP1LC3A-204ENST00000476428 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.45□□□□□ -0.26
MAP1LC3A-204ENST00000476428 A0A087WZ39 114 aa13.44□□□□□ -0.26
MAP1LC3A-204ENST00000476428 PANO1I0J062 215 aa13.44□□□□□ -0.26
MAP1LC3A-204ENST00000476428 TRGC2P03986 189 aa13.44□□□□□ -0.26
MAP1LC3A-204ENST00000476428 SYCNQ0VAF6 134 aa13.44□□□□□ -0.26
MAP1LC3A-204ENST00000476428 FAM19A3Q7Z5A8 133 aa13.44□□□□□ -0.26
MAP1LC3A-204ENST00000476428 CIRBP-AS1Q8TBR5 109 aa13.44□□□□□ -0.26
MAP1LC3A-204ENST00000476428 SPAG11BQ08648 103 aa13.43□□□□□ -0.26
MAP1LC3A-204ENST00000476428 OR10D4PQ8NGN7 298 aa13.43□□□□□ -0.26
MAP1LC3A-204ENST00000476428 ORAOV1Q8WV07 137 aa13.43□□□□□ -0.26
MAP1LC3A-204ENST00000476428 CARD19Q96LW7 228 aa13.43□□□□□ -0.26
MAP1LC3A-204ENST00000476428 PMCHL1Q16048 86 aa13.42□□□□□ -0.26
MAP1LC3A-204ENST00000476428 C2orf48Q96LS8 159 aa13.42□□□□□ -0.26
MAP1LC3A-204ENST00000476428 EPM2AB3EWF7 344 aa13.41□□□□□ -0.26
MAP1LC3A-204ENST00000476428 SCO1O75880 301 aa13.41□□□□□ -0.26
MAP1LC3A-204ENST00000476428 HBDP02042 147 aa13.41□□□□□ -0.26
MAP1LC3A-204ENST00000476428 Q6ZRU5 148 aa13.41□□□□□ -0.26
MAP1LC3A-204ENST00000476428 CST9LQ9H4G1 147 aa13.41□□□□□ -0.26
MAP1LC3A-204ENST00000476428 FAT1Q14517 4588 aa13.41□□□□□ -0.26
MAP1LC3A-204ENST00000476428 A0A0J9YXV3 536 aa13.4□□□□□ -0.26
MAP1LC3A-204ENST00000476428 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.4□□□□□ -0.26
MAP1LC3A-204ENST00000476428 CHTF8P0CG12 524 aa13.4□□□□□ -0.26
MAP1LC3A-204ENST00000476428 LINC01561Q8N1V8 128 aa13.4□□□□□ -0.26
MAP1LC3A-204ENST00000476428 CAMK2N2Q96S95 79 aa13.4□□□□□ -0.26
MAP1LC3A-204ENST00000476428 SEC11AP67812 179 aa13.39□□□□□ -0.27
MAP1LC3A-204ENST00000476428 CIRBPQ14011 172 aaKnown RBP13.39□□□□□ -0.27
MAP1LC3A-204ENST00000476428 PMVKQ15126 192 aa13.39□□□□□ -0.27
MAP1LC3A-204ENST00000476428 PDZD11Q5EBL8 140 aa13.39□□□□□ -0.27
MAP1LC3A-204ENST00000476428 HERVK_113P63121 156 aa13.38□□□□□ -0.27
MAP1LC3A-204ENST00000476428 Q5VSD8 79 aa13.38□□□□□ -0.27
MAP1LC3A-204ENST00000476428 CHCHD1Q96BP2 118 aaKnown RBP13.38□□□□□ -0.27
MAP1LC3A-204ENST00000476428 GEMIN7Q9H840 131 aaKnown RBP13.38□□□□□ -0.27
MAP1LC3A-204ENST00000476428 KIAA0087Q14695 138 aa13.37□□□□□ -0.27
MAP1LC3A-204ENST00000476428 DPH3Q96FX2 82 aa13.37□□□□□ -0.27
MAP1LC3A-204ENST00000476428 CDKN2A-AS1Q9UH64 79 aa13.37□□□□□ -0.27
MAP1LC3A-204ENST00000476428 F8WDY8 70 aa13.36□□□□□ -0.27
MAP1LC3A-204ENST00000476428 FAM229AH3BQW9 127 aa13.36□□□□□ -0.27
MAP1LC3A-204ENST00000476428 BAGE3Q86Y29 109 aa13.36□□□□□ -0.27
MAP1LC3A-204ENST00000476428 IGKV2-24A0A0C4DH68 120 aa13.35□□□□□ -0.27
MAP1LC3A-204ENST00000476428 TINCRA0A1B0GVN0 87 aa13.35□□□□□ -0.27
MAP1LC3A-204ENST00000476428 LINC00528Q8N1L1 170 aa13.35□□□□□ -0.27
MAP1LC3A-204ENST00000476428 SPACA4Q8TDM5 124 aa13.35□□□□□ -0.27
MAP1LC3A-204ENST00000476428 DMBT1Q9UGM3 2413 aaPredicted RBP13.35□□□□□ -0.27
MAP1LC3A-204ENST00000476428 A0A096LNI7 61 aa13.34□□□□□ -0.27
MAP1LC3A-204ENST00000476428 A0A087WYN8 130 aa13.33□□□□□ -0.28
MAP1LC3A-204ENST00000476428 NDUFA1O15239 70 aa13.33□□□□□ -0.28
MAP1LC3A-204ENST00000476428 ATP5LO75964 103 aa13.33□□□□□ -0.28
MAP1LC3A-204ENST00000476428 NDUFA6P56556 154 aa13.33□□□□□ -0.28
MAP1LC3A-204ENST00000476428 RNF151Q2KHN1 245 aa13.33□□□□□ -0.28
MAP1LC3A-204ENST00000476428 MAJINQ3KP22 176 aa13.33□□□□□ -0.28
MAP1LC3A-204ENST00000476428 C10orf25Q5T742 122 aa13.33□□□□□ -0.28
MAP1LC3A-204ENST00000476428 UNQ6190/PRO20217Q6UXQ8 127 aa13.33□□□□□ -0.28
MAP1LC3A-204ENST00000476428 LINC00469Q8N7U9 141 aa13.33□□□□□ -0.28
MAP1LC3A-204ENST00000476428 PKIGQ9Y2B9 76 aa13.33□□□□□ -0.28
MAP1LC3A-204ENST00000476428 MRPL35Q9NZE8 188 aaKnown RBP13.32□□□□□ -0.28
MAP1LC3A-204ENST00000476428 IGLV5-45A0A087WSX0 123 aa13.31□□□□□ -0.28
MAP1LC3A-204ENST00000476428 LOC107984640A0A0U1RRK4 108 aa13.31□□□□□ -0.28
MAP1LC3A-204ENST00000476428 HSBP1O75506 76 aa13.3□□□□□ -0.28
MAP1LC3A-204ENST00000476428 C2orf82Q6UX34 121 aa13.3□□□□□ -0.28
MAP1LC3A-204ENST00000476428 FAM19A2Q8N3H0 131 aa13.3□□□□□ -0.28
MAP1LC3A-204ENST00000476428 PACRGQ96M98 296 aaPredicted RBP13.3□□□□□ -0.28
MAP1LC3A-204ENST00000476428 PLAC8Q9NZF1 115 aa13.3□□□□□ -0.28
MAP1LC3A-204ENST00000476428 TOMM7Q9P0U1 55 aa13.3□□□□□ -0.28
MAP1LC3A-204ENST00000476428 LINC00310P59036 64 aa13.29□□□□□ -0.28
MAP1LC3A-204ENST00000476428 GAGE2BQ13066 116 aa13.29□□□□□ -0.28
MAP1LC3A-204ENST00000476428 C6orf48Q9UBA6 75 aa13.29□□□□□ -0.28
MAP1LC3A-204ENST00000476428 SERF1AO75920 110 aa13.28□□□□□ -0.28
MAP1LC3A-204ENST00000476428 PRSS2P07478 247 aa13.28□□□□□ -0.28
MAP1LC3A-204ENST00000476428 IGLC3P0DOY3 106 aa13.28□□□□□ -0.28
MAP1LC3A-204ENST00000476428 PTTG1IPP53801 180 aa13.28□□□□□ -0.28
MAP1LC3A-204ENST00000476428 LINC00474Q9P2X8 69 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms