RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 H7C423 109 aa4.9□□□□□ -1.63
UBR4-212ENST00000475973 HIST2H2BDQ6DRA6 164 aa4.9□□□□□ -1.63
UBR4-212ENST00000475973 Q9UF83 564 aa4.9□□□□□ -1.63
UBR4-212ENST00000475973 NDUFA12Q9UI09 145 aa4.9□□□□□ -1.63
UBR4-212ENST00000475973 NACAE9PAV3 2078 aa4.9□□□□□ -1.63
UBR4-212ENST00000475973 TRAV8-3A0A0A6YYJ7 113 aa4.89□□□□□ -1.63
UBR4-212ENST00000475973 TRAV25A0A0B4J276 109 aa4.89□□□□□ -1.63
UBR4-212ENST00000475973 TRBV7-7A0A0K0K1E9 115 aa4.89□□□□□ -1.63
UBR4-212ENST00000475973 SYNJ2BPP57105 145 aa4.89□□□□□ -1.63
UBR4-212ENST00000475973 ZNF415Q09FC8 603 aa4.89□□□□□ -1.63
UBR4-212ENST00000475973 FAM74A4Q5TZK3 123 aa4.89□□□□□ -1.63
UBR4-212ENST00000475973 C22orf24Q9Y442 160 aa4.89□□□□□ -1.63
UBR4-212ENST00000475973 ICOSQ9Y6W8 199 aa4.89□□□□□ -1.63
UBR4-212ENST00000475973 PKD1L1Q8TDX9 2849 aa4.89□□□□□ -1.63
UBR4-212ENST00000475973 IGHV3OR16-12A0A075B7B8 117 aa4.88□□□□□ -1.63
UBR4-212ENST00000475973 TRAV26-1A0A087WT03 109 aa4.88□□□□□ -1.63
UBR4-212ENST00000475973 TRBV10-1A0A0K0K1A3 114 aa4.88□□□□□ -1.63
UBR4-212ENST00000475973 F5H768 121 aa4.88□□□□□ -1.63
UBR4-212ENST00000475973 PRB2P02812 416 aaPredicted RBP4.88□□□□□ -1.63
UBR4-212ENST00000475973 LINC00242Q5T6M2 205 aa4.88□□□□□ -1.63
UBR4-212ENST00000475973 NTN5Q8WTR8 489 aaPredicted RBP4.88□□□□□ -1.63
UBR4-212ENST00000475973 ZNF625Q96I27 306 aaPredicted RBP4.88□□□□□ -1.63
UBR4-212ENST00000475973 TMEM101Q96IK0 257 aa4.88□□□□□ -1.63
UBR4-212ENST00000475973 MAP6D1Q9H9H5 199 aa4.88□□□□□ -1.63
UBR4-212ENST00000475973 KNCNA6PVL3 124 aa4.87□□□□□ -1.63
UBR4-212ENST00000475973 DEFB131AP59861 70 aa4.87□□□□□ -1.63
UBR4-212ENST00000475973 DEFB114Q30KQ6 69 aa4.87□□□□□ -1.63
UBR4-212ENST00000475973 FAM222AQ5U5X8 452 aa4.87□□□□□ -1.63
UBR4-212ENST00000475973 SFTA2Q6UW10 78 aa4.87□□□□□ -1.63
UBR4-212ENST00000475973 WFDC9Q8NEX5 89 aa4.87□□□□□ -1.63
UBR4-212ENST00000475973 LINC00308Q8TCZ7 52 aa4.87□□□□□ -1.63
UBR4-212ENST00000475973 C4orf3Q8WVX3 66 aa4.87□□□□□ -1.63
UBR4-212ENST00000475973 CDKN2A-AS1Q9UH64 79 aa4.87□□□□□ -1.63
UBR4-212ENST00000475973 TNFRSF18Q9Y5U5 241 aa4.87□□□□□ -1.63
UBR4-212ENST00000475973 VWFP04275 2813 aa4.86□□□□□ -1.63
UBR4-212ENST00000475973 TRAV4A0A0B4J268 109 aa4.86□□□□□ -1.63
UBR4-212ENST00000475973 SMIM1B2RUZ4 78 aa4.86□□□□□ -1.63
UBR4-212ENST00000475973 IGKV3-20P01619 116 aa4.86□□□□□ -1.63
UBR4-212ENST00000475973 TRACP01848 142 aa4.86□□□□□ -1.63
UBR4-212ENST00000475973 HERVK_113P63121 156 aa4.86□□□□□ -1.63
UBR4-212ENST00000475973 COX6A2Q02221 97 aa4.86□□□□□ -1.63
UBR4-212ENST00000475973 CEMP1Q6PRD7 247 aaPredicted RBP4.86□□□□□ -1.63
UBR4-212ENST00000475973 SOSTDC1Q6X4U4 206 aa4.86□□□□□ -1.63
UBR4-212ENST00000475973 C1orf158Q8N1D5 194 aa4.86□□□□□ -1.63
UBR4-212ENST00000475973 DEFB104AQ8WTQ1 72 aa4.86□□□□□ -1.63
UBR4-212ENST00000475973 FAM110AQ9BQ89 295 aa4.86□□□□□ -1.63
UBR4-212ENST00000475973 IMUPQ9GZP8 106 aa4.86□□□□□ -1.63
UBR4-212ENST00000475973 TEX49A0A1B0GTD5 131 aa4.85□□□□□ -1.63
UBR4-212ENST00000475973 COX7A2LO14548 114 aa4.85□□□□□ -1.63
UBR4-212ENST00000475973 ACYP1P07311 99 aa4.85□□□□□ -1.63
UBR4-212ENST00000475973 COX6CP09669 75 aa4.85□□□□□ -1.63
UBR4-212ENST00000475973 LINC00694P0DN24 101 aa4.85□□□□□ -1.63
UBR4-212ENST00000475973 NDUFV3P56181 108 aaKnown RBP4.85□□□□□ -1.63
UBR4-212ENST00000475973 GAGE5Q13069 117 aa4.85□□□□□ -1.63
UBR4-212ENST00000475973 GAGE6Q13070 117 aa4.85□□□□□ -1.63
UBR4-212ENST00000475973 DAZ2Q13117 558 aaKnown RBP4.85□□□□□ -1.63
UBR4-212ENST00000475973 ODF3L2Q3SX64 289 aa4.85□□□□□ -1.63
UBR4-212ENST00000475973 NTM-AS1Q6ZSK4 140 aa4.85□□□□□ -1.63
UBR4-212ENST00000475973 UBE2WQ96B02 151 aa4.85□□□□□ -1.63
UBR4-212ENST00000475973 CDC42SE2Q9NRR3 84 aa4.85□□□□□ -1.63
UBR4-212ENST00000475973 PEMTQ9UBM1 199 aa4.85□□□□□ -1.63
UBR4-212ENST00000475973 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.84□□□□□ -1.63
UBR4-212ENST00000475973 PLAC8L1A1L4L8 177 aa4.84□□□□□ -1.63
UBR4-212ENST00000475973 IGKV2-29A2NJV5 120 aaPredicted RBP4.84□□□□□ -1.63
UBR4-212ENST00000475973 A8MZ25 164 aa4.84□□□□□ -1.63
UBR4-212ENST00000475973 HERV-K104P63124 156 aa4.84□□□□□ -1.63
UBR4-212ENST00000475973 EGFEM1PQ0D2K5 195 aa4.84□□□□□ -1.63
UBR4-212ENST00000475973 GAGE2BQ13066 116 aa4.84□□□□□ -1.63
UBR4-212ENST00000475973 GAGE2EQ4V326 116 aa4.84□□□□□ -1.63
UBR4-212ENST00000475973 C2orf82Q6UX34 121 aa4.84□□□□□ -1.63
UBR4-212ENST00000475973 C18orf65Q6ZTR6 163 aa4.84□□□□□ -1.63
UBR4-212ENST00000475973 DAZ4Q86SG3 579 aaKnown RBP4.84□□□□□ -1.63
UBR4-212ENST00000475973 OVOL2Q9BRP0 275 aa4.84□□□□□ -1.63
UBR4-212ENST00000475973 DAZ3Q9NR90 486 aaKnown RBP4.84□□□□□ -1.63
UBR4-212ENST00000475973 GAGE2DQ9UEU5 116 aa4.84□□□□□ -1.63
UBR4-212ENST00000475973 IGHV3-64A0A075B6Q5 118 aa4.83□□□□□ -1.64
UBR4-212ENST00000475973 TRAV8-4A0A0B4J246 113 aa4.83□□□□□ -1.64
UBR4-212ENST00000475973 K7EIL1 84 aa4.83□□□□□ -1.64
UBR4-212ENST00000475973 CCL24O00175 119 aa4.83□□□□□ -1.64
UBR4-212ENST00000475973 INSP01308 110 aa4.83□□□□□ -1.64
UBR4-212ENST00000475973 GIG44P09565 113 aaPredicted RBP4.83□□□□□ -1.64
UBR4-212ENST00000475973 RPL28P46779 137 aaKnown RBP4.83□□□□□ -1.64
UBR4-212ENST00000475973 C9orf66Q5T8R8 295 aa4.83□□□□□ -1.64
UBR4-212ENST00000475973 C15orf53Q8NAA6 179 aa4.83□□□□□ -1.64
UBR4-212ENST00000475973 COPS9Q8WXC6 57 aa4.83□□□□□ -1.64
UBR4-212ENST00000475973 OBSCN-AS1Q96MR7 158 aa4.83□□□□□ -1.64
UBR4-212ENST00000475973 DUX3Q96PT4 197 aa4.83□□□□□ -1.64
UBR4-212ENST00000475973 PRM2P04554 102 aa4.82□□□□□ -1.64
UBR4-212ENST00000475973 PRSS2P07478 247 aa4.82□□□□□ -1.64
UBR4-212ENST00000475973 CIRBPQ14011 172 aaKnown RBP4.82□□□□□ -1.64
UBR4-212ENST00000475973 DAND5Q8N907 189 aa4.82□□□□□ -1.64
UBR4-212ENST00000475973 NOTCH1P46531 2555 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 CMYA5Q8N3K9 4069 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 IGHV3-73A0A0B4J1V6 119 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 TRBV6-4A0A1B0GX49 114 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 GAGE12JA6NER3 117 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 K7EQD1 137 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 PAX4O43316 350 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 SNCGO76070 127 aa4.81□□□□□ -1.64
UBR4-212ENST00000475973 GAGE7O76087 117 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms