RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 KANTRA0A1W2PQU2 76 aa11.74□□□□□ -0.53
HDAC11-217ENST00000475818 MED9Q9NWA0 146 aa11.74□□□□□ -0.53
HDAC11-217ENST00000475818 LINC00173Q6ZV60 143 aa11.73□□□□□ -0.53
HDAC11-217ENST00000475818 NUPR1O60356 82 aa11.72□□□□□ -0.53
HDAC11-217ENST00000475818 SMAGPQ0VAQ4 97 aa11.72□□□□□ -0.53
HDAC11-217ENST00000475818 KRTAP13-2Q52LG2 175 aa11.72□□□□□ -0.53
HDAC11-217ENST00000475818 LINC00304Q8N9R0 145 aa11.71□□□□□ -0.53
HDAC11-217ENST00000475818 IGHV3OR16-9A0A0B4J2B5 98 aa11.7□□□□□ -0.54
HDAC11-217ENST00000475818 K7EN84 100 aa11.7□□□□□ -0.54
HDAC11-217ENST00000475818 SLC51BQ86UW2 128 aa11.7□□□□□ -0.54
HDAC11-217ENST00000475818 VCYO14598 125 aa11.69□□□□□ -0.54
HDAC11-217ENST00000475818 RPL28P46779 137 aaKnown RBP11.69□□□□□ -0.54
HDAC11-217ENST00000475818 NDUFC2-KCTD14E9PQ53 114 aa11.68□□□□□ -0.54
HDAC11-217ENST00000475818 SMKR1H3BMG3 65 aa11.68□□□□□ -0.54
HDAC11-217ENST00000475818 PDE6DO43924 150 aa11.68□□□□□ -0.54
HDAC11-217ENST00000475818 PPDPFQ9H3Y8 114 aa11.68□□□□□ -0.54
HDAC11-217ENST00000475818 C2orf82Q6UX34 121 aa11.67□□□□□ -0.54
HDAC11-217ENST00000475818 C22orf24Q9Y442 160 aa11.67□□□□□ -0.54
HDAC11-217ENST00000475818 KIAA0087Q14695 138 aa11.66□□□□□ -0.54
HDAC11-217ENST00000475818 TRBV30A0A0K0K1B3 111 aa11.65□□□□□ -0.54
HDAC11-217ENST00000475818 RAB4AP20338 218 aa11.65□□□□□ -0.54
HDAC11-217ENST00000475818 LINC00242Q5T6M2 205 aa11.65□□□□□ -0.54
HDAC11-217ENST00000475818 AMN1Q8IY45 258 aa11.65□□□□□ -0.54
HDAC11-217ENST00000475818 OCC1Q8TAD7 63 aa11.65□□□□□ -0.54
HDAC11-217ENST00000475818 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.54
HDAC11-217ENST00000475818 KRTAP4-1Q9BYQ7 146 aa11.65□□□□□ -0.54
HDAC11-217ENST00000475818 GATCO43716 136 aaKnown RBP11.64□□□□□ -0.55
HDAC11-217ENST00000475818 BCE1O60756 84 aa11.64□□□□□ -0.55
HDAC11-217ENST00000475818 IFITM2Q01629 132 aa11.64□□□□□ -0.55
HDAC11-217ENST00000475818 LINC00469Q8N7U9 141 aa11.64□□□□□ -0.55
HDAC11-217ENST00000475818 KIR2DL4Q99706 377 aa11.64□□□□□ -0.55
HDAC11-217ENST00000475818 LBHQ53QV2 105 aaPredicted RBP11.63□□□□□ -0.55
HDAC11-217ENST00000475818 FAM104AQ969W3 186 aa11.63□□□□□ -0.55
HDAC11-217ENST00000475818 TMEM18Q96B42 140 aa11.63□□□□□ -0.55
HDAC11-217ENST00000475818 BORCS7Q96B45 105 aa11.63□□□□□ -0.55
HDAC11-217ENST00000475818 PACRGQ96M98 296 aaPredicted RBP11.63□□□□□ -0.55
HDAC11-217ENST00000475818 TMEM191AQ9H0A3 160 aa11.63□□□□□ -0.55
HDAC11-217ENST00000475818 IFITM10A6NMD0 228 aa11.62□□□□□ -0.55
HDAC11-217ENST00000475818 SUMO2P61956 95 aaKnown RBP11.62□□□□□ -0.55
HDAC11-217ENST00000475818 RPL39P62891 51 aaKnown RBP11.62□□□□□ -0.55
HDAC11-217ENST00000475818 TGIF2-C20orf24A0A0A6YYL0 155 aa11.6□□□□□ -0.55
HDAC11-217ENST00000475818 A8MWL6 223 aa11.6□□□□□ -0.55
HDAC11-217ENST00000475818 NRACQ8N912 160 aa11.6□□□□□ -0.55
HDAC11-217ENST00000475818 XAGE1AQ9HD64 81 aa11.6□□□□□ -0.55
HDAC11-217ENST00000475818 ASB16-AS1Q495Z4 193 aa11.59□□□□□ -0.55
HDAC11-217ENST00000475818 ALKAL2Q6UX46 152 aa11.59□□□□□ -0.55
HDAC11-217ENST00000475818 A0A1B0GUT8 65 aa11.58□□□□□ -0.56
HDAC11-217ENST00000475818 TEX46H3BTG2 121 aa11.58□□□□□ -0.56
HDAC11-217ENST00000475818 HBBP68871 147 aa11.58□□□□□ -0.56
HDAC11-217ENST00000475818 ZNF727A8MUV8 499 aa11.57□□□□□ -0.56
HDAC11-217ENST00000475818 MRPL55Q7Z7F7 128 aaKnown RBP11.57□□□□□ -0.56
HDAC11-217ENST00000475818 LINC00337Q8N6G1 96 aa11.57□□□□□ -0.56
HDAC11-217ENST00000475818 IGKV2D-26A0A0A0MRZ7 120 aa11.56□□□□□ -0.56
HDAC11-217ENST00000475818 FAM229BQ4G0N7 80 aa11.56□□□□□ -0.56
HDAC11-217ENST00000475818 RPL37AP8A6NKH3 93 aa11.55□□□□□ -0.56
HDAC11-217ENST00000475818 SPANXA1Q9NS26 97 aa11.55□□□□□ -0.56
HDAC11-217ENST00000475818 HIGD1CA8MV81 97 aa11.54□□□□□ -0.56
HDAC11-217ENST00000475818 PPP1R17O96001 155 aa11.54□□□□□ -0.56
HDAC11-217ENST00000475818 PPP1R2P9O14990 202 aa11.53□□□□□ -0.56
HDAC11-217ENST00000475818 MRPS36P82909 103 aaKnown RBP11.53□□□□□ -0.56
HDAC11-217ENST00000475818 FAM231DQ6ZW35 169 aa11.53□□□□□ -0.56
HDAC11-217ENST00000475818 UBE2AP49459 152 aa11.52□□□□□ -0.57
HDAC11-217ENST00000475818 CT83Q5H943 113 aa11.52□□□□□ -0.57
HDAC11-217ENST00000475818 TP73-AS1Q9UF72 201 aa11.52□□□□□ -0.57
HDAC11-217ENST00000475818 GAGE10A6NGK3 116 aa11.51□□□□□ -0.57
HDAC11-217ENST00000475818 LINC00167Q96N53 147 aa11.51□□□□□ -0.57
HDAC11-217ENST00000475818 KRTAP13-3Q3SY46 172 aa11.5□□□□□ -0.57
HDAC11-217ENST00000475818 KRTAP13-1Q8IUC0 172 aa11.5□□□□□ -0.57
HDAC11-217ENST00000475818 TOMM7Q9P0U1 55 aa11.5□□□□□ -0.57
HDAC11-217ENST00000475818 CLLU1Q5K131 121 aa11.49□□□□□ -0.57
HDAC11-217ENST00000475818 PRSS2P07478 247 aa11.48□□□□□ -0.57
HDAC11-217ENST00000475818 SEC61BP60468 96 aaKnown RBP11.48□□□□□ -0.57
HDAC11-217ENST00000475818 CKS1BP61024 79 aa11.48□□□□□ -0.57
HDAC11-217ENST00000475818 RAB14P61106 215 aa11.48□□□□□ -0.57
HDAC11-217ENST00000475818 CTAG1AP78358 180 aa11.48□□□□□ -0.57
HDAC11-217ENST00000475818 MRPL51Q4U2R6 128 aaKnown RBP11.48□□□□□ -0.57
HDAC11-217ENST00000475818 BLOC1S1P78537 153 aa11.47□□□□□ -0.57
HDAC11-217ENST00000475818 LCE2CQ5TA81 110 aa11.47□□□□□ -0.57
HDAC11-217ENST00000475818 FP248Q71RG6 208 aaPredicted RBP11.47□□□□□ -0.57
HDAC11-217ENST00000475818 RIGQ13278 110 aa11.46□□□□□ -0.57
HDAC11-217ENST00000475818 C3orf22Q8N5N4 141 aa11.46□□□□□ -0.57
HDAC11-217ENST00000475818 C20orf78Q9BR46 151 aa11.46□□□□□ -0.57
HDAC11-217ENST00000475818 TCAPO15273 167 aa11.45□□□□□ -0.58
HDAC11-217ENST00000475818 RPL32P62910 135 aaKnown RBP11.45□□□□□ -0.58
HDAC11-217ENST00000475818 C6orf226Q5I0X4 101 aa11.44□□□□□ -0.58
HDAC11-217ENST00000475818 SMIM2Q9BVW6 85 aa11.44□□□□□ -0.58
HDAC11-217ENST00000475818 TAGLN2P37802 199 aaKnown RBP11.43□□□□□ -0.58
HDAC11-217ENST00000475818 CEBPGP53567 150 aa11.43□□□□□ -0.58
HDAC11-217ENST00000475818 IGLV4-3A0A075B6K6 122 aa11.42□□□□□ -0.58
HDAC11-217ENST00000475818 IFI27P40305 119 aaPredicted RBP11.42□□□□□ -0.58
HDAC11-217ENST00000475818 FAM104BQ5XKR9 115 aa11.42□□□□□ -0.58
HDAC11-217ENST00000475818 LINC01561Q8N1V8 128 aa11.42□□□□□ -0.58
HDAC11-217ENST00000475818 TNFRSF6BO95407 300 aa11.41□□□□□ -0.58
HDAC11-217ENST00000475818 CKS2P33552 79 aa11.41□□□□□ -0.58
HDAC11-217ENST00000475818 PRLHP81277 87 aa11.41□□□□□ -0.58
HDAC11-217ENST00000475818 PNRC1Q12796 327 aaPredicted RBP11.41□□□□□ -0.58
HDAC11-217ENST00000475818 TRBV24-1A0A075B6N3 115 aa11.4□□□□□ -0.58
HDAC11-217ENST00000475818 LINC00862A6NCI5 91 aa11.4□□□□□ -0.58
HDAC11-217ENST00000475818 ZC2HC1BQ5TFG8 222 aa11.4□□□□□ -0.58
HDAC11-217ENST00000475818 Q6ZN92 141 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms