RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 C15orf56Q8N910 161 aa9.87□□□□□ -0.83
SNX13-207ENST00000475800 SCGB3A1Q96QR1 104 aa9.87□□□□□ -0.83
SNX13-207ENST00000475800 AMELXQ99217 191 aa9.87□□□□□ -0.83
SNX13-207ENST00000475800 GVQW2A0A096LPI5 108 aaPredicted RBP9.86□□□□□ -0.83
SNX13-207ENST00000475800 TRGC2P03986 189 aa9.86□□□□□ -0.83
SNX13-207ENST00000475800 MALP21145 153 aa9.86□□□□□ -0.83
SNX13-207ENST00000475800 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.85□□□□□ -0.83
SNX13-207ENST00000475800 APOMO95445 188 aa9.85□□□□□ -0.83
SNX13-207ENST00000475800 KRTAP10-1P60331 282 aa9.85□□□□□ -0.83
SNX13-207ENST00000475800 CNBPP62633 177 aaKnown RBP9.85□□□□□ -0.83
SNX13-207ENST00000475800 SEC11AP67812 179 aa9.85□□□□□ -0.83
SNX13-207ENST00000475800 CHCHD1Q96BP2 118 aaKnown RBP9.85□□□□□ -0.83
SNX13-207ENST00000475800 HBDP02042 147 aa9.84□□□□□ -0.83
SNX13-207ENST00000475800 S100A1P23297 94 aa9.84□□□□□ -0.83
SNX13-207ENST00000475800 UBE2D1P51668 147 aa9.84□□□□□ -0.83
SNX13-207ENST00000475800 URB1-AS1Q96HZ7 61 aa9.84□□□□□ -0.83
SNX13-207ENST00000475800 IGHV3OR16-9A0A0B4J2B5 98 aa9.83□□□□□ -0.84
SNX13-207ENST00000475800 LINC00173Q6ZV60 143 aa9.83□□□□□ -0.84
SNX13-207ENST00000475800 TMEM238LA0A1B0GVL6 79 aa9.82□□□□□ -0.84
SNX13-207ENST00000475800 EPM2AB3EWF7 344 aa9.82□□□□□ -0.84
SNX13-207ENST00000475800 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.82□□□□□ -0.84
SNX13-207ENST00000475800 ZNF561-AS1K7EIQ3 104 aa9.82□□□□□ -0.84
SNX13-207ENST00000475800 SCO1O75880 301 aa9.82□□□□□ -0.84
SNX13-207ENST00000475800 HIGD2BQ4VC39 106 aa9.82□□□□□ -0.84
SNX13-207ENST00000475800 LINC00242Q5T6M2 205 aa9.82□□□□□ -0.84
SNX13-207ENST00000475800 FAM19A3Q7Z5A8 133 aa9.82□□□□□ -0.84
SNX13-207ENST00000475800 C5orf38Q86SI9 138 aa9.82□□□□□ -0.84
SNX13-207ENST00000475800 BAGE3Q86Y29 109 aa9.82□□□□□ -0.84
SNX13-207ENST00000475800 C9orf163Q8N9P6 203 aa9.82□□□□□ -0.84
SNX13-207ENST00000475800 FAT1Q14517 4588 aa9.81□□□□□ -0.84
SNX13-207ENST00000475800 A0A087WZ39 114 aa9.8□□□□□ -0.84
SNX13-207ENST00000475800 A0A096LNJ9 63 aa9.8□□□□□ -0.84
SNX13-207ENST00000475800 ATP5LO75964 103 aa9.8□□□□□ -0.84
SNX13-207ENST00000475800 HERVK_113P63121 156 aa9.8□□□□□ -0.84
SNX13-207ENST00000475800 HAMPP81172 84 aa9.8□□□□□ -0.84
SNX13-207ENST00000475800 LINC01561Q8N1V8 128 aa9.8□□□□□ -0.84
SNX13-207ENST00000475800 OR10D4PQ8NGN7 298 aa9.8□□□□□ -0.84
SNX13-207ENST00000475800 HSBP1O75506 76 aa9.79□□□□□ -0.84
SNX13-207ENST00000475800 PMVKQ15126 192 aa9.79□□□□□ -0.84
SNX13-207ENST00000475800 ZC2HC1BQ5TFG8 222 aa9.79□□□□□ -0.84
SNX13-207ENST00000475800 GEMIN7Q9H840 131 aaKnown RBP9.79□□□□□ -0.84
SNX13-207ENST00000475800 PKIGQ9Y2B9 76 aa9.79□□□□□ -0.84
SNX13-207ENST00000475800 HERC1Q15751 4861 aa9.78□□□□□ -0.84
SNX13-207ENST00000475800 IGHV3-64A0A075B6Q5 118 aa9.78□□□□□ -0.84
SNX13-207ENST00000475800 F8WDY8 70 aa9.78□□□□□ -0.84
SNX13-207ENST00000475800 SMR3BP02814 79 aaPredicted RBP9.78□□□□□ -0.84
SNX13-207ENST00000475800 PMCHL1Q16048 86 aa9.78□□□□□ -0.84
SNX13-207ENST00000475800 PDZD11Q5EBL8 140 aa9.78□□□□□ -0.84
SNX13-207ENST00000475800 Q6ZSA8 131 aa9.78□□□□□ -0.84
SNX13-207ENST00000475800 CST9LQ9H4G1 147 aa9.78□□□□□ -0.84
SNX13-207ENST00000475800 ATP6V1G1O75348 118 aa9.77□□□□□ -0.85
SNX13-207ENST00000475800 SLPIP03973 132 aa9.77□□□□□ -0.85
SNX13-207ENST00000475800 XGP55808 180 aa9.77□□□□□ -0.85
SNX13-207ENST00000475800 COX6A2Q02221 97 aa9.77□□□□□ -0.85
SNX13-207ENST00000475800 SPAG11BQ08648 103 aa9.77□□□□□ -0.85
SNX13-207ENST00000475800 LINC01620Q4KN68 170 aa9.77□□□□□ -0.85
SNX13-207ENST00000475800 ORAOV1Q8WV07 137 aa9.77□□□□□ -0.85
SNX13-207ENST00000475800 C2orf48Q96LS8 159 aa9.77□□□□□ -0.85
SNX13-207ENST00000475800 TINCRA0A1B0GVN0 87 aa9.76□□□□□ -0.85
SNX13-207ENST00000475800 INAFM2P0DMQ5 153 aa9.76□□□□□ -0.85
SNX13-207ENST00000475800 SYCNQ0VAF6 134 aa9.76□□□□□ -0.85
SNX13-207ENST00000475800 CARD19Q96LW7 228 aa9.76□□□□□ -0.85
SNX13-207ENST00000475800 IGLV4-69A0A075B6H9 119 aa9.75□□□□□ -0.85
SNX13-207ENST00000475800 A0A0J9YXV3 536 aa9.75□□□□□ -0.85
SNX13-207ENST00000475800 Q5VSD8 79 aa9.75□□□□□ -0.85
SNX13-207ENST00000475800 SERF1AO75920 110 aa9.74□□□□□ -0.85
SNX13-207ENST00000475800 SDIM1Q6ZPB5 146 aa9.74□□□□□ -0.85
SNX13-207ENST00000475800 PACRGQ96M98 296 aaPredicted RBP9.74□□□□□ -0.85
SNX13-207ENST00000475800 CAMK2N2Q96S95 79 aa9.74□□□□□ -0.85
SNX13-207ENST00000475800 FAM30AQ9NZY2 134 aa9.74□□□□□ -0.85
SNX13-207ENST00000475800 NDUFA6P56556 154 aa9.73□□□□□ -0.85
SNX13-207ENST00000475800 LINC00469Q8N7U9 141 aa9.73□□□□□ -0.85
SNX13-207ENST00000475800 LINC00526Q96FQ7 95 aa9.73□□□□□ -0.85
SNX13-207ENST00000475800 IGLV5-45A0A087WSX0 123 aa9.72□□□□□ -0.85
SNX13-207ENST00000475800 NDUFA1O15239 70 aa9.72□□□□□ -0.85
SNX13-207ENST00000475800 IFI27L1Q96BM0 104 aa9.72□□□□□ -0.85
SNX13-207ENST00000475800 CDKN2A-AS1Q9UH64 79 aa9.72□□□□□ -0.85
SNX13-207ENST00000475800 HIST1H2BKO60814 126 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 HIST1H2BJP06899 126 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 PRSS2P07478 247 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 IGLC3P0DOY3 106 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 HIST1H2BOP23527 126 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 HIST1H2BBP33778 126 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 HIST1H2BDP58876 126 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 HIST1H2BCP62807 126 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 HIST2H2BEQ16778 126 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 RNF151Q2KHN1 245 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.71□□□□□ -0.86
SNX13-207ENST00000475800 FAM19A2Q8N3H0 131 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 HIST1H2BHQ93079 126 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 HIST1H2BNQ99877 126 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 HIST1H2BMQ99879 126 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 CHAC1Q9BUX1 264 aa9.71□□□□□ -0.86
SNX13-207ENST00000475800 TRAV12-1A0A0B4J245 112 aa9.7□□□□□ -0.86
SNX13-207ENST00000475800 H3BRM9 83 aa9.7□□□□□ -0.86
SNX13-207ENST00000475800 LEPROTL1O95214 131 aa9.7□□□□□ -0.86
SNX13-207ENST00000475800 LINC00310P59036 64 aa9.7□□□□□ -0.86
SNX13-207ENST00000475800 Q6ZRU5 148 aa9.7□□□□□ -0.86
SNX13-207ENST00000475800 MRPL35Q9NZE8 188 aaKnown RBP9.7□□□□□ -0.86
SNX13-207ENST00000475800 FLG2Q5D862 2391 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms