RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 IGLV4-60A0A075B6I1 120 aa10.73□□□□□ -0.69
RPUSD3-215ENST00000475470 A0A096LPF7 62 aa10.73□□□□□ -0.69
RPUSD3-215ENST00000475470 G3V4G9 280 aa10.73□□□□□ -0.69
RPUSD3-215ENST00000475470 ATP5G1P05496 136 aa10.73□□□□□ -0.69
RPUSD3-215ENST00000475470 ZFAND6Q6FIF0 208 aa10.73□□□□□ -0.69
RPUSD3-215ENST00000475470 RPL24P83731 157 aaKnown RBP10.73□□□□□ -0.69
RPUSD3-215ENST00000475470 EGFEM1PQ0D2K5 195 aa10.72□□□□□ -0.69
RPUSD3-215ENST00000475470 FBN1P35555 2871 aaKnown RBP10.72□□□□□ -0.69
RPUSD3-215ENST00000475470 IGKV3OR2-268A0A0C4DH90 116 aa10.72□□□□□ -0.69
RPUSD3-215ENST00000475470 APOMO95445 188 aa10.72□□□□□ -0.69
RPUSD3-215ENST00000475470 F5H768 121 aa10.71□□□□□ -0.69
RPUSD3-215ENST00000475470 IGLV5-39A0A0G2JS06 123 aa10.7□□□□□ -0.7
RPUSD3-215ENST00000475470 TMEM262E9PQX1 116 aa10.7□□□□□ -0.7
RPUSD3-215ENST00000475470 SMIM1B2RUZ4 78 aa10.7□□□□□ -0.7
RPUSD3-215ENST00000475470 HTN3P15516 51 aa10.7□□□□□ -0.7
RPUSD3-215ENST00000475470 MUSTN1Q8IVN3 82 aa10.7□□□□□ -0.7
RPUSD3-215ENST00000475470 TRAV26-1A0A087WT03 109 aa10.69□□□□□ -0.7
RPUSD3-215ENST00000475470 NDUFA1O15239 70 aa10.69□□□□□ -0.7
RPUSD3-215ENST00000475470 MTURNQ8N3F0 131 aa10.69□□□□□ -0.7
RPUSD3-215ENST00000475470 LITAFQ99732 161 aa10.69□□□□□ -0.7
RPUSD3-215ENST00000475470 PGPEP1Q9NXJ5 209 aa10.69□□□□□ -0.7
RPUSD3-215ENST00000475470 BAHCC1Q9P281 2608 aa10.69□□□□□ -0.7
RPUSD3-215ENST00000475470 TEX48A0A1B0GUV7 120 aa10.68□□□□□ -0.7
RPUSD3-215ENST00000475470 H3BMG7 143 aa10.68□□□□□ -0.7
RPUSD3-215ENST00000475470 PRSS2P07478 247 aa10.68□□□□□ -0.7
RPUSD3-215ENST00000475470 CFC1BP0CG36 223 aa10.68□□□□□ -0.7
RPUSD3-215ENST00000475470 CFC1P0CG37 223 aa10.68□□□□□ -0.7
RPUSD3-215ENST00000475470 WFDC2Q14508 124 aa10.68□□□□□ -0.7
RPUSD3-215ENST00000475470 A4D1N5 150 aa10.67□□□□□ -0.7
RPUSD3-215ENST00000475470 Q9H8V8 135 aa10.67□□□□□ -0.7
RPUSD3-215ENST00000475470 A0A1B0GUV1 79 aa10.66□□□□□ -0.7
RPUSD3-215ENST00000475470 ADAMTSL4-AS1Q5T5F5 129 aa10.66□□□□□ -0.7
RPUSD3-215ENST00000475470 SPANXDQ9BXN6 97 aa10.66□□□□□ -0.7
RPUSD3-215ENST00000475470 RETNQ9HD89 108 aa10.66□□□□□ -0.7
RPUSD3-215ENST00000475470 SPANXCQ9NY87 97 aa10.66□□□□□ -0.7
RPUSD3-215ENST00000475470 STAB1Q9NY15 2570 aa10.65□□□□□ -0.7
RPUSD3-215ENST00000475470 TIMM17BO60830 172 aa10.65□□□□□ -0.7
RPUSD3-215ENST00000475470 CIRBPQ14011 172 aaKnown RBP10.65□□□□□ -0.71
RPUSD3-215ENST00000475470 MRPL23Q16540 153 aaKnown RBP10.65□□□□□ -0.71
RPUSD3-215ENST00000475470 MIAQ16674 131 aa10.65□□□□□ -0.71
RPUSD3-215ENST00000475470 SFTA2Q6UW10 78 aa10.65□□□□□ -0.71
RPUSD3-215ENST00000475470 LINC00959A0A1B0GUT2 108 aa10.64□□□□□ -0.71
RPUSD3-215ENST00000475470 TSPAN13O95857 204 aa10.64□□□□□ -0.71
RPUSD3-215ENST00000475470 PRO1854Q9UHT4 67 aa10.64□□□□□ -0.71
RPUSD3-215ENST00000475470 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.64□□□□□ -0.71
RPUSD3-215ENST00000475470 SH2D6Q7Z4S9 175 aa10.64□□□□□ -0.71
RPUSD3-215ENST00000475470 ZNF625Q96I27 306 aaPredicted RBP10.64□□□□□ -0.71
RPUSD3-215ENST00000475470 ICOSQ9Y6W8 199 aa10.63□□□□□ -0.71
RPUSD3-215ENST00000475470 IGHV3OR16-9A0A0B4J2B5 98 aa10.63□□□□□ -0.71
RPUSD3-215ENST00000475470 F8W1H4 67 aa10.62□□□□□ -0.71
RPUSD3-215ENST00000475470 NPC2P61916 151 aa10.62□□□□□ -0.71
RPUSD3-215ENST00000475470 SS18Q15532 418 aa10.62□□□□□ -0.71
RPUSD3-215ENST00000475470 A0A0B4J2C4 111 aa10.62□□□□□ -0.71
RPUSD3-215ENST00000475470 LOC107984156A0A0G2JMH3 177 aa10.61□□□□□ -0.71
RPUSD3-215ENST00000475470 ETDBQ3ZM63 59 aa10.61□□□□□ -0.71
RPUSD3-215ENST00000475470 ARL17AQ8IVW1 177 aa10.61□□□□□ -0.71
RPUSD3-215ENST00000475470 DAND5Q8N907 189 aa10.61□□□□□ -0.71
RPUSD3-215ENST00000475470 COX7B2Q8TF08 81 aa10.61□□□□□ -0.71
RPUSD3-215ENST00000475470 IFITM1P13164 125 aa10.6□□□□□ -0.71
RPUSD3-215ENST00000475470 HERV-K104P63124 156 aa10.6□□□□□ -0.71
RPUSD3-215ENST00000475470 CLPSL2Q6UWE3 100 aa10.6□□□□□ -0.71
RPUSD3-215ENST00000475470 C5orf38Q86SI9 138 aa10.6□□□□□ -0.71
RPUSD3-215ENST00000475470 TOMM7Q9P0U1 55 aa10.6□□□□□ -0.71
RPUSD3-215ENST00000475470 MAST4O15021 2626 aa10.6□□□□□ -0.71
RPUSD3-215ENST00000475470 A0A087WZ39 114 aa10.6□□□□□ -0.71
RPUSD3-215ENST00000475470 MEIG1Q5JSS6 88 aa10.6□□□□□ -0.71
RPUSD3-215ENST00000475470 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
RPUSD3-215ENST00000475470 XCL1P47992 114 aa10.59□□□□□ -0.71
RPUSD3-215ENST00000475470 A0A0U1RRA0 63 aa10.59□□□□□ -0.71
RPUSD3-215ENST00000475470 LELP1Q5T871 98 aa10.58□□□□□ -0.72
RPUSD3-215ENST00000475470 LINC00269Q8N2A0 174 aa10.58□□□□□ -0.72
RPUSD3-215ENST00000475470 PRO0461Q9UI25 63 aa10.58□□□□□ -0.72
RPUSD3-215ENST00000475470 ERG28Q9UKR5 140 aa10.58□□□□□ -0.72
RPUSD3-215ENST00000475470 PKD1L1Q8TDX9 2849 aa10.58□□□□□ -0.72
RPUSD3-215ENST00000475470 IGHV3-33P01772 117 aa10.58□□□□□ -0.72
RPUSD3-215ENST00000475470 ANGP03950 147 aaKnown RBP10.58□□□□□ -0.72
RPUSD3-215ENST00000475470 LYRM7Q5U5X0 104 aa10.58□□□□□ -0.72
RPUSD3-215ENST00000475470 H7C2G1 150 aa10.57□□□□□ -0.72
RPUSD3-215ENST00000475470 PSMB2P49721 201 aa10.57□□□□□ -0.72
RPUSD3-215ENST00000475470 C11orf68Q9H3H3 251 aaKnown RBP10.57□□□□□ -0.72
RPUSD3-215ENST00000475470 CMYA5Q8N3K9 4069 aa10.57□□□□□ -0.72
RPUSD3-215ENST00000475470 Q8N3U1 123 aa10.56□□□□□ -0.72
RPUSD3-215ENST00000475470 Q1RN00 199 aa10.56□□□□□ -0.72
RPUSD3-215ENST00000475470 LINC00308Q8TCZ7 52 aa10.56□□□□□ -0.72
RPUSD3-215ENST00000475470 COPS9Q8WXC6 57 aa10.56□□□□□ -0.72
RPUSD3-215ENST00000475470 SCGB1C2P0DMR2 95 aa10.55□□□□□ -0.72
RPUSD3-215ENST00000475470 REG3AQ06141 175 aa10.55□□□□□ -0.72
RPUSD3-215ENST00000475470 Q6ZTC4 211 aa10.55□□□□□ -0.72
RPUSD3-215ENST00000475470 A0A0J9YWU9 116 aa10.54□□□□□ -0.72
RPUSD3-215ENST00000475470 LYPD5Q6UWN5 251 aa10.54□□□□□ -0.72
RPUSD3-215ENST00000475470 COL6A5A8TX70 2615 aa10.53□□□□□ -0.72
RPUSD3-215ENST00000475470 H3BNG1 76 aa10.53□□□□□ -0.72
RPUSD3-215ENST00000475470 C6orf226Q5I0X4 101 aa10.53□□□□□ -0.72
RPUSD3-215ENST00000475470 KPRPQ5T749 579 aaPredicted RBP10.53□□□□□ -0.72
RPUSD3-215ENST00000475470 CD164L2Q6UWJ8 174 aa10.53□□□□□ -0.72
RPUSD3-215ENST00000475470 CHCHD10Q8WYQ3 142 aaPredicted RBP10.53□□□□□ -0.72
RPUSD3-215ENST00000475470 IGLV10-54A0A075B6I4 117 aa10.52□□□□□ -0.73
RPUSD3-215ENST00000475470 J3QR89 54 aa10.52□□□□□ -0.73
RPUSD3-215ENST00000475470 PRB2P02812 416 aaPredicted RBP10.52□□□□□ -0.73
RPUSD3-215ENST00000475470 SMCPP49901 116 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms