RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 RGS21Q2M5E4 152 aa7.56□□□□□ -1.2
SKA3-206ENST00000475251 CT83Q5H943 113 aa7.56□□□□□ -1.2
SKA3-206ENST00000475251 FAM231DQ6ZW35 169 aa7.56□□□□□ -1.2
SKA3-206ENST00000475251 FAM19A5Q7Z5A7 132 aaPredicted RBP7.56□□□□□ -1.2
SKA3-206ENST00000475251 RNASE13Q5GAN3 156 aaKnown RBP7.55□□□□□ -1.2
SKA3-206ENST00000475251 ORAOV1Q8WV07 137 aa7.55□□□□□ -1.2
SKA3-206ENST00000475251 BATF3Q9NR55 127 aa7.55□□□□□ -1.2
SKA3-206ENST00000475251 A0A1B0GUT8 65 aa7.54□□□□□ -1.2
SKA3-206ENST00000475251 FAM168BA1KXE4 195 aa7.54□□□□□ -1.2
SKA3-206ENST00000475251 TIMM21Q9BVV7 248 aa7.54□□□□□ -1.2
SKA3-206ENST00000475251 M0QXV9 152 aa7.53□□□□□ -1.2
SKA3-206ENST00000475251 PPP1R2P9O14990 202 aa7.53□□□□□ -1.2
SKA3-206ENST00000475251 RAB4AP20338 218 aa7.53□□□□□ -1.2
SKA3-206ENST00000475251 SUMO2P61956 95 aaKnown RBP7.53□□□□□ -1.2
SKA3-206ENST00000475251 Q6ZUT4 128 aa7.53□□□□□ -1.2
SKA3-206ENST00000475251 SMDT1Q9H4I9 107 aa7.53□□□□□ -1.2
SKA3-206ENST00000475251 TCAPO15273 167 aa7.52□□□□□ -1.21
SKA3-206ENST00000475251 GAGE2EQ4V326 116 aa7.52□□□□□ -1.21
SKA3-206ENST00000475251 KRTAP11-1Q8IUC1 163 aa7.52□□□□□ -1.21
SKA3-206ENST00000475251 AMN1Q8IY45 258 aa7.52□□□□□ -1.21
SKA3-206ENST00000475251 GAGE2DQ9UEU5 116 aa7.52□□□□□ -1.21
SKA3-206ENST00000475251 HIGD1CA8MV81 97 aa7.51□□□□□ -1.21
SKA3-206ENST00000475251 TMEM250H0YL14 139 aa7.51□□□□□ -1.21
SKA3-206ENST00000475251 IGHV3OR16-9A0A0B4J2B5 98 aa7.5□□□□□ -1.21
SKA3-206ENST00000475251 C6orf48Q9UBA6 75 aa7.5□□□□□ -1.21
SKA3-206ENST00000475251 TRBV30A0A0K0K1B3 111 aa7.49□□□□□ -1.21
SKA3-206ENST00000475251 ZNF861PO60384 105 aa7.49□□□□□ -1.21
SKA3-206ENST00000475251 RIGQ13278 110 aa7.49□□□□□ -1.21
SKA3-206ENST00000475251 C10orf25Q5T742 122 aa7.49□□□□□ -1.21
SKA3-206ENST00000475251 UNQ6190/PRO20217Q6UXQ8 127 aa7.49□□□□□ -1.21
SKA3-206ENST00000475251 FAT4Q6V0I7 4981 aa7.48□□□□□ -1.21
SKA3-206ENST00000475251 TGIF2-C20orf24A0A0A6YYL0 155 aa7.48□□□□□ -1.21
SKA3-206ENST00000475251 NDUFC2-KCTD14E9PQ53 114 aa7.48□□□□□ -1.21
SKA3-206ENST00000475251 SMKR1H3BMG3 65 aa7.48□□□□□ -1.21
SKA3-206ENST00000475251 NUPR1O60356 82 aa7.48□□□□□ -1.21
SKA3-206ENST00000475251 TSPAN13O95857 204 aa7.48□□□□□ -1.21
SKA3-206ENST00000475251 HBBP68871 147 aa7.48□□□□□ -1.21
SKA3-206ENST00000475251 NRACQ8N912 160 aa7.48□□□□□ -1.21
SKA3-206ENST00000475251 SPANXA1Q9NS26 97 aa7.48□□□□□ -1.21
SKA3-206ENST00000475251 IFITM10A6NMD0 228 aa7.47□□□□□ -1.21
SKA3-206ENST00000475251 MRPS36P82909 103 aaKnown RBP7.47□□□□□ -1.21
SKA3-206ENST00000475251 PACRGQ96M98 296 aaPredicted RBP7.47□□□□□ -1.21
SKA3-206ENST00000475251 C20orf78Q9BR46 151 aa7.47□□□□□ -1.21
SKA3-206ENST00000475251 LINC00862A6NCI5 91 aa7.46□□□□□ -1.22
SKA3-206ENST00000475251 RPL32P62910 135 aaKnown RBP7.46□□□□□ -1.22
SKA3-206ENST00000475251 SLC51BQ86UW2 128 aa7.46□□□□□ -1.22
SKA3-206ENST00000475251 KRTAP7-1Q8IUC3 87 aa7.46□□□□□ -1.22
SKA3-206ENST00000475251 CEBPGP53567 150 aa7.45□□□□□ -1.22
SKA3-206ENST00000475251 OSTCQ9NRP0 149 aa7.45□□□□□ -1.22
SKA3-206ENST00000475251 TRBV24-1A0A075B6N3 115 aa7.44□□□□□ -1.22
SKA3-206ENST00000475251 CRYGAP11844 174 aa7.44□□□□□ -1.22
SKA3-206ENST00000475251 RPL39P62891 51 aaKnown RBP7.44□□□□□ -1.22
SKA3-206ENST00000475251 LBHQ53QV2 105 aaPredicted RBP7.44□□□□□ -1.22
SKA3-206ENST00000475251 C9orf129Q5T035 196 aaKnown RBP7.44□□□□□ -1.22
SKA3-206ENST00000475251 LINC01551Q86U37 167 aa7.44□□□□□ -1.22
SKA3-206ENST00000475251 TYMSOSQ8TAI1 123 aa7.44□□□□□ -1.22
SKA3-206ENST00000475251 SMIM7Q9BQ49 75 aa7.44□□□□□ -1.22
SKA3-206ENST00000475251 RPL28P46779 137 aaKnown RBP7.43□□□□□ -1.22
SKA3-206ENST00000475251 KIAA0087Q14695 138 aa7.43□□□□□ -1.22
SKA3-206ENST00000475251 MRPL51Q4U2R6 128 aaKnown RBP7.43□□□□□ -1.22
SKA3-206ENST00000475251 FAM104BQ5XKR9 115 aa7.43□□□□□ -1.22
SKA3-206ENST00000475251 NAT8BQ9UHF3 227 aa7.43□□□□□ -1.22
SKA3-206ENST00000475251 CKS2P33552 79 aa7.42□□□□□ -1.22
SKA3-206ENST00000475251 IFI27P40305 119 aaPredicted RBP7.42□□□□□ -1.22
SKA3-206ENST00000475251 BLOC1S1P78537 153 aa7.42□□□□□ -1.22
SKA3-206ENST00000475251 SMIM2Q9BVW6 85 aa7.42□□□□□ -1.22
SKA3-206ENST00000475251 A0A1B0GW15 77 aa7.41□□□□□ -1.22
SKA3-206ENST00000475251 C2orf82Q6UX34 121 aa7.41□□□□□ -1.22
SKA3-206ENST00000475251 LINC01561Q8N1V8 128 aa7.41□□□□□ -1.22
SKA3-206ENST00000475251 FAM104AQ969W3 186 aa7.41□□□□□ -1.22
SKA3-206ENST00000475251 CTDSP1Q9GZU7 261 aa7.41□□□□□ -1.22
SKA3-206ENST00000475251 CDIP1Q9H305 208 aa7.41□□□□□ -1.22
SKA3-206ENST00000475251 C22orf24Q9Y442 160 aa7.41□□□□□ -1.22
SKA3-206ENST00000475251 A0A087X002 238 aa7.4□□□□□ -1.22
SKA3-206ENST00000475251 ZNF727A8MUV8 499 aa7.4□□□□□ -1.22
SKA3-206ENST00000475251 TNFRSF6BO95407 300 aa7.4□□□□□ -1.22
SKA3-206ENST00000475251 PRSS2P07478 247 aa7.4□□□□□ -1.22
SKA3-206ENST00000475251 V9GYV3 84 aa7.4□□□□□ -1.22
SKA3-206ENST00000475251 BCE1O60756 84 aa7.39□□□□□ -1.23
SKA3-206ENST00000475251 CKS1BP61024 79 aa7.39□□□□□ -1.23
SKA3-206ENST00000475251 TPRXLQ17RH7 258 aa7.39□□□□□ -1.23
SKA3-206ENST00000475251 LINC00242Q5T6M2 205 aa7.39□□□□□ -1.23
SKA3-206ENST00000475251 EIF5A2Q9GZV4 153 aaKnown RBP7.39□□□□□ -1.23
SKA3-206ENST00000475251 TP73-AS1Q9UF72 201 aa7.39□□□□□ -1.23
SKA3-206ENST00000475251 PYGO1Q9Y3Y4 419 aa7.39□□□□□ -1.23
SKA3-206ENST00000475251 KRTAP4-8A0A0G2JLE6 195 aa7.38□□□□□ -1.23
SKA3-206ENST00000475251 S100A8P05109 93 aa7.38□□□□□ -1.23
SKA3-206ENST00000475251 RAB5AP20339 215 aa7.38□□□□□ -1.23
SKA3-206ENST00000475251 TEX43Q6ZNM6 134 aa7.38□□□□□ -1.23
SKA3-206ENST00000475251 TMEM141Q96I45 108 aa7.38□□□□□ -1.23
SKA3-206ENST00000475251 C2orf88Q9BSF0 95 aa7.38□□□□□ -1.23
SKA3-206ENST00000475251 F8W036 122 aa7.37□□□□□ -1.23
SKA3-206ENST00000475251 PPBPP02775 128 aa7.37□□□□□ -1.23
SKA3-206ENST00000475251 FAM74A3Q4VXF1 159 aa7.37□□□□□ -1.23
SKA3-206ENST00000475251 MRPL55Q7Z7F7 128 aaKnown RBP7.37□□□□□ -1.23
SKA3-206ENST00000475251 D6R8Y8 96 aa7.36□□□□□ -1.23
SKA3-206ENST00000475251 CTAG1AP78358 180 aa7.36□□□□□ -1.23
SKA3-206ENST00000475251 C6orf226Q5I0X4 101 aa7.36□□□□□ -1.23
SKA3-206ENST00000475251 Q6ZN92 141 aa7.36□□□□□ -1.23
SKA3-206ENST00000475251 TCTE3Q8IZS6 198 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 1607.1 ms