RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 C9JCJ5 164 aa8.09□□□□□ -1.11
HLA-DOB-208ENST00000475235 IGKV2D-40P01614 121 aaPredicted RBP8.09□□□□□ -1.11
HLA-DOB-208ENST00000475235 FXYD2P54710 66 aa8.09□□□□□ -1.11
HLA-DOB-208ENST00000475235 PRR26Q8N8Z3 221 aa8.09□□□□□ -1.11
HLA-DOB-208ENST00000475235 ZNF503Q96F45 646 aa8.09□□□□□ -1.11
HLA-DOB-208ENST00000475235 LINC00467Q9BRT7 94 aa8.09□□□□□ -1.11
HLA-DOB-208ENST00000475235 Q9H3A6 140 aa8.09□□□□□ -1.11
HLA-DOB-208ENST00000475235 ZNF492Q9P255 531 aa8.09□□□□□ -1.11
HLA-DOB-208ENST00000475235 TRGV11A0A075B6L2 103 aa8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 TRAV8-1A0A0A6YYK1 113 aa8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 GCHFRP30047 84 aa8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 ZNF138P52744 262 aa8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 UBE2D3P61077 147 aa8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 UBE2D2P62837 147 aa8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 LINC00612Q8N6U2 182 aa8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 DNAH10Q8IVF4 4471 aa8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 CTXND1A0A1B0GTU2 59 aa8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 RNASE4P34096 147 aaKnown RBP8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 DSCR8Q96T75 97 aa8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 NHP2Q9NX24 153 aaKnown RBP8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 HHLA3Q9XRX5 114 aa8.08□□□□□ -1.12
HLA-DOB-208ENST00000475235 NPYP01303 97 aa8.07□□□□□ -1.12
HLA-DOB-208ENST00000475235 ATP5EP56381 51 aaPredicted RBP8.07□□□□□ -1.12
HLA-DOB-208ENST00000475235 PCP2Q8IVA1 136 aa8.07□□□□□ -1.12
HLA-DOB-208ENST00000475235 ZFAND2AQ8N6M9 145 aa8.07□□□□□ -1.12
HLA-DOB-208ENST00000475235 SERP2Q8N6R1 65 aa8.07□□□□□ -1.12
HLA-DOB-208ENST00000475235 CHAC1Q9BUX1 264 aa8.07□□□□□ -1.12
HLA-DOB-208ENST00000475235 OSTCQ9NRP0 149 aa8.07□□□□□ -1.12
HLA-DOB-208ENST00000475235 LENEPQ9Y5L5 61 aa8.07□□□□□ -1.12
HLA-DOB-208ENST00000475235 DNAH6Q9C0G6 4158 aa8.07□□□□□ -1.12
HLA-DOB-208ENST00000475235 IGHV1-58A0A0C4DH39 117 aa8.06□□□□□ -1.12
HLA-DOB-208ENST00000475235 hADV29S1A0JD25 119 aa8.06□□□□□ -1.12
HLA-DOB-208ENST00000475235 C5orf38Q86SI9 138 aa8.06□□□□□ -1.12
HLA-DOB-208ENST00000475235 LINC00643Q86TS7 51 aa8.06□□□□□ -1.12
HLA-DOB-208ENST00000475235 UPK3BQ9BT76 320 aa8.06□□□□□ -1.12
HLA-DOB-208ENST00000475235 Q9H8V8 135 aa8.06□□□□□ -1.12
HLA-DOB-208ENST00000475235 IGHV1OR15-1A0A075B7D0 117 aa8.05□□□□□ -1.12
HLA-DOB-208ENST00000475235 MYMXA0A1B0GTQ4 84 aa8.05□□□□□ -1.12
HLA-DOB-208ENST00000475235 PGPA6NDG6 321 aa8.05□□□□□ -1.12
HLA-DOB-208ENST00000475235 SMKR1H3BMG3 65 aa8.05□□□□□ -1.12
HLA-DOB-208ENST00000475235 ATP5L2Q7Z4Y8 100 aa8.05□□□□□ -1.12
HLA-DOB-208ENST00000475235 C11orf72Q8NBR9 251 aa8.05□□□□□ -1.12
HLA-DOB-208ENST00000475235 Q8TAT8 98 aa8.05□□□□□ -1.12
HLA-DOB-208ENST00000475235 TP73-AS1Q9UF72 201 aa8.05□□□□□ -1.12
HLA-DOB-208ENST00000475235 TRGV2A0A075B6R0 118 aa8.04□□□□□ -1.12
HLA-DOB-208ENST00000475235 PAX4O43316 350 aa8.04□□□□□ -1.12
HLA-DOB-208ENST00000475235 CCL18P55774 89 aa8.04□□□□□ -1.12
HLA-DOB-208ENST00000475235 PRR9Q5T870 116 aa8.04□□□□□ -1.12
HLA-DOB-208ENST00000475235 NXT2Q9NPJ8 142 aaKnown RBP8.04□□□□□ -1.12
HLA-DOB-208ENST00000475235 H3BNG1 76 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 ZNF726P1Q15940 193 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 SCGB1D4Q6XE38 83 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 Q6ZTI0 123 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 EPDR1Q9UM22 224 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 DNAH2Q9P225 4427 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 IGLV2-18A0A075B6J9 118 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 TRGV1A0A0A0MS02 117 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 M0R2N4 97 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 SPINK4O60575 86 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 TCRAP04437 139 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 ARL14EPLP0DKL9 152 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 RBM12B-AS1Q9P1G2 102 aa8.03□□□□□ -1.12
HLA-DOB-208ENST00000475235 SMIM27A0A1W2PRY6 76 aa8.02□□□□□ -1.13
HLA-DOB-208ENST00000475235 VCYO14598 125 aa8.02□□□□□ -1.13
HLA-DOB-208ENST00000475235 TMEM167BQ9NRX6 74 aa8.02□□□□□ -1.13
HLA-DOB-208ENST00000475235 V9GYV3 84 aa8.02□□□□□ -1.13
HLA-DOB-208ENST00000475235 FRAS1Q86XX4 4008 aa8.02□□□□□ -1.13
HLA-DOB-208ENST00000475235 NDUFS5O43920 106 aa8.01□□□□□ -1.13
HLA-DOB-208ENST00000475235 Q6ZR54 194 aa8.01□□□□□ -1.13
HLA-DOB-208ENST00000475235 IFI27L1Q96BM0 104 aa8.01□□□□□ -1.13
HLA-DOB-208ENST00000475235 TRAV21A0A0B4J279 112 aa8□□□□□ -1.13
HLA-DOB-208ENST00000475235 A0A0J9YY99 117 aa8□□□□□ -1.13
HLA-DOB-208ENST00000475235 SLC25A20O43772 301 aa8□□□□□ -1.13
HLA-DOB-208ENST00000475235 KTN1-AS1Q86SY8 53 aa7.99□□□□□ -1.13
HLA-DOB-208ENST00000475235 C11orf52Q96A22 123 aa7.99□□□□□ -1.13
HLA-DOB-208ENST00000475235 LINC00588Q9Y4M8 146 aa7.99□□□□□ -1.13
HLA-DOB-208ENST00000475235 RTL8CO15255 209 aa7.98□□□□□ -1.13
HLA-DOB-208ENST00000475235 PSMB2P49721 201 aa7.98□□□□□ -1.13
HLA-DOB-208ENST00000475235 C1orf134Q5TEV5 83 aa7.98□□□□□ -1.13
HLA-DOB-208ENST00000475235 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
HLA-DOB-208ENST00000475235 HECTD4Q9Y4D8 3996 aa7.98□□□□□ -1.13
HLA-DOB-208ENST00000475235 NBDYA0A0U1RRE5 68 aa7.98□□□□□ -1.13
HLA-DOB-208ENST00000475235 K7ERJ3 54 aa7.98□□□□□ -1.13
HLA-DOB-208ENST00000475235 FAT2Q9NYQ8 4349 aa7.97□□□□□ -1.13
HLA-DOB-208ENST00000475235 HERVK_113P61574 105 aa7.97□□□□□ -1.13
HLA-DOB-208ENST00000475235 ZNF56Q15929 161 aa7.97□□□□□ -1.13
HLA-DOB-208ENST00000475235 FP248Q71RG6 208 aaPredicted RBP7.97□□□□□ -1.13
HLA-DOB-208ENST00000475235 VSIG2Q96IQ7 327 aa7.97□□□□□ -1.13
HLA-DOB-208ENST00000475235 PRO0255Q9UI72 69 aa7.97□□□□□ -1.13
HLA-DOB-208ENST00000475235 C19orf71A6NCJ1 209 aa7.96□□□□□ -1.14
HLA-DOB-208ENST00000475235 BCE1O60756 84 aa7.96□□□□□ -1.14
HLA-DOB-208ENST00000475235 IGHV3-53P01767 116 aa7.96□□□□□ -1.14
HLA-DOB-208ENST00000475235 LGALS3P17931 250 aaKnown RBP7.96□□□□□ -1.14
HLA-DOB-208ENST00000475235 TMEM75Q8N9X5 138 aa7.96□□□□□ -1.14
HLA-DOB-208ENST00000475235 URB1-AS1Q96HZ7 61 aa7.96□□□□□ -1.14
HLA-DOB-208ENST00000475235 DNAH17Q9UFH2 4485 aa7.96□□□□□ -1.14
HLA-DOB-208ENST00000475235 A0A096LPF7 62 aa7.95□□□□□ -1.14
HLA-DOB-208ENST00000475235 C8orf87E5RJ46 101 aa7.95□□□□□ -1.14
HLA-DOB-208ENST00000475235 ESRGQ1W209 222 aa7.95□□□□□ -1.14
HLA-DOB-208ENST00000475235 ORMDL2Q53FV1 153 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms