RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 TRBV6-5A0A0K0K1A5 114 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 FAM229AH3BQW9 127 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 M0QXV9 152 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 CFC1BP0CG36 223 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 CFC1P0CG37 223 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 RBMY1A1P0DJD3 496 aaKnown RBP2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 RBMY1CP0DJD4 496 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 UBE2D1P51668 147 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 RBMY1FQ15415 496 aaKnown RBP2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 Q8NAQ8 132 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 TIMM17AQ99595 171 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 X6R8D5 127 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 COL7A1Q02388 2944 aa2.98□□□□□ -1.93
GAPVD1-216ENST00000474637 TGP01266 2768 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 IGHV4-28A0A0C4DH34 117 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 PAPPA-AS1Q5QFB9 102 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 C15orf53Q8NAA6 179 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 Q9UF83 564 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 IGHV3OR16-12A0A075B7B8 117 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 NUPR2A6NF83 97 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 I3L3M4 83 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 Q1RN00 199 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 LYRM7Q5U5X0 104 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 C1orf158Q8N1D5 194 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 C10orf126Q8N4M7 172 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 C11orf45Q8TAV5 145 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 C16orf74Q96GX8 76 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 LINC01587Q99440 93 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 LINC00467Q9BRT7 94 aa2.97□□□□□ -1.93
GAPVD1-216ENST00000474637 TRGV11A0A075B6L2 103 aa2.96□□□□□ -1.93
GAPVD1-216ENST00000474637 IGHV3-64A0A075B6Q5 118 aa2.96□□□□□ -1.93
GAPVD1-216ENST00000474637 TRAV8-4A0A0B4J246 113 aa2.96□□□□□ -1.93
GAPVD1-216ENST00000474637 A0A0J9YY99 117 aa2.96□□□□□ -1.93
GAPVD1-216ENST00000474637 LOC107984640A0A0U1RRK4 108 aa2.96□□□□□ -1.93
GAPVD1-216ENST00000474637 SPART-AS1P0CW21 52 aa2.96□□□□□ -1.93
GAPVD1-216ENST00000474637 TSPEAR-AS2P59090 65 aa2.96□□□□□ -1.93
GAPVD1-216ENST00000474637 HERVK_113P61574 105 aa2.96□□□□□ -1.93
GAPVD1-216ENST00000474637 CEMP1Q6PRD7 247 aaPredicted RBP2.96□□□□□ -1.93
GAPVD1-216ENST00000474637 C20orf203Q8NBC4 194 aa2.96□□□□□ -1.93
GAPVD1-216ENST00000474637 A0A0J9YXV3 536 aa2.96□□□□□ -1.94
GAPVD1-216ENST00000474637 LYRM9A8MSI8 78 aa2.96□□□□□ -1.94
GAPVD1-216ENST00000474637 J3QQQ9 107 aa2.96□□□□□ -1.94
GAPVD1-216ENST00000474637 RHOHQ15669 191 aa2.96□□□□□ -1.94
GAPVD1-216ENST00000474637 MRPL23Q16540 153 aaKnown RBP2.96□□□□□ -1.94
GAPVD1-216ENST00000474637 CASC10Q5T4H9 136 aa2.96□□□□□ -1.94
GAPVD1-216ENST00000474637 Q6ZSN1 163 aa2.96□□□□□ -1.94
GAPVD1-216ENST00000474637 SPXQ9BT56 116 aa2.96□□□□□ -1.94
GAPVD1-216ENST00000474637 PRO1854Q9UHT4 67 aa2.96□□□□□ -1.94
GAPVD1-216ENST00000474637 KLK5Q9Y337 293 aaPredicted RBP2.96□□□□□ -1.94
GAPVD1-216ENST00000474637 IGLV4-3A0A075B6K6 122 aa2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 A4D1N5 150 aa2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 IGHV3-30P01768 117 aa2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 LINC00694P0DN24 101 aa2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 IGHV3-30-5P0DP03 117 aa2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 LGALS3P17931 250 aaKnown RBP2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 RNASE13Q5GAN3 156 aaKnown RBP2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 SLC25A29Q8N8R3 303 aa2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 TMEM263Q8WUH6 116 aaKnown RBP2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 AMELXQ99217 191 aa2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 TRAV10A0A0B4J240 114 aa2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 TMEM223A0PJW6 202 aa2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 M0R2P5 195 aa2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 DEFB4AO15263 64 aa2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 FAM104AQ969W3 186 aa2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 DYNC2H1Q8NCM8 4307 aaKnown RBP2.95□□□□□ -1.94
GAPVD1-216ENST00000474637 IGHV3-38A0A0C4DH36 116 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 ZNF22P17026 224 aaPredicted RBP2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 NANOS2P60321 138 aaKnown RBP2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 DAD1P61803 113 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 FAM222AQ5U5X8 452 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 NBEAL2Q6ZNJ1 2754 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 FAM236AA0A1B0GUQ0 79 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 FAM236BA0A1B0GV22 79 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 IGKV2-29A2NJV5 120 aaPredicted RBP2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 LEPROTO15243 131 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 EIF4EBP3O60516 100 aaPredicted RBP2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 DAZ2Q13117 558 aaKnown RBP2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 LINC01620Q4KN68 170 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 Q6Q795 121 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 C2orf82Q6UX34 121 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 MUSTN1Q8IVN3 82 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 UBE2WQ96B02 151 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 CELA1Q9UNI1 258 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 TENM3Q9P273 2699 aa2.94□□□□□ -1.94
GAPVD1-216ENST00000474637 TRAV8-3A0A0A6YYJ7 113 aa2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 PLAC8L1A1L4L8 177 aa2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 IGHV3-33P01772 117 aa2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 IGHV3-30-3P0DP02 117 aa2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 NPC2P61916 151 aa2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 ZNF415Q09FC8 603 aa2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 ATXN8Q156A1 80 aa2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 C11orf72Q8NBR9 251 aa2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 CHCHD7Q9BUK0 85 aa2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 PYGO1Q9Y3Y4 419 aa2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 CSDC2Q9Y534 153 aaKnown RBP2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 DEFB131BA0A096LNP1 70 aa2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 PRSS2P07478 247 aa2.93□□□□□ -1.94
GAPVD1-216ENST00000474637 MRPS36P82909 103 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms