RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 IGLC3P0DOY3 106 aa7.03□□□□□ -1.28
COL12A1-206ENST00000474564 LGALS3P17931 250 aaKnown RBP7.03□□□□□ -1.28
COL12A1-206ENST00000474564 ANKRD39Q53RE8 183 aa7.03□□□□□ -1.28
COL12A1-206ENST00000474564 CLPSL2Q6UWE3 100 aa7.03□□□□□ -1.28
COL12A1-206ENST00000474564 FBN3Q75N90 2809 aa7.03□□□□□ -1.28
COL12A1-206ENST00000474564 IGLV4-69A0A075B6H9 119 aa7.02□□□□□ -1.29
COL12A1-206ENST00000474564 NBDYA0A0U1RRE5 68 aa7.02□□□□□ -1.29
COL12A1-206ENST00000474564 MALP21145 153 aa7.02□□□□□ -1.29
COL12A1-206ENST00000474564 UBE2D1P51668 147 aa7.02□□□□□ -1.29
COL12A1-206ENST00000474564 PRR34Q9NV39 138 aa7.02□□□□□ -1.29
COL12A1-206ENST00000474564 IGHV3-64A0A075B6Q5 118 aa7.01□□□□□ -1.29
COL12A1-206ENST00000474564 IGKV2D-24A0A075B6R9 120 aa7.01□□□□□ -1.29
COL12A1-206ENST00000474564 PSCAO43653 123 aa7.01□□□□□ -1.29
COL12A1-206ENST00000474564 APOMO95445 188 aa7.01□□□□□ -1.29
COL12A1-206ENST00000474564 COX8AP10176 69 aa7.01□□□□□ -1.29
COL12A1-206ENST00000474564 XCL1P47992 114 aa7.01□□□□□ -1.29
COL12A1-206ENST00000474564 CFAP161Q6P656 301 aa7.01□□□□□ -1.29
COL12A1-206ENST00000474564 CD164L2Q6UWJ8 174 aa7.01□□□□□ -1.29
COL12A1-206ENST00000474564 CHCHD10Q8WYQ3 142 aaPredicted RBP7.01□□□□□ -1.29
COL12A1-206ENST00000474564 LINC00476Q8WZB0 136 aa7.01□□□□□ -1.29
COL12A1-206ENST00000474564 Q9HAA7 133 aa7.01□□□□□ -1.29
COL12A1-206ENST00000474564 COX7A2LO14548 114 aa7□□□□□ -1.29
COL12A1-206ENST00000474564 ZNF22P17026 224 aaPredicted RBP7□□□□□ -1.29
COL12A1-206ENST00000474564 ENHOQ6UWT2 76 aa7□□□□□ -1.29
COL12A1-206ENST00000474564 PLEKHB2Q96CS7 222 aa7□□□□□ -1.29
COL12A1-206ENST00000474564 IGLV10-54A0A075B6I4 117 aa6.99□□□□□ -1.29
COL12A1-206ENST00000474564 E9PLD3 99 aa6.99□□□□□ -1.29
COL12A1-206ENST00000474564 LINC00242Q5T6M2 205 aa6.99□□□□□ -1.29
COL12A1-206ENST00000474564 SCGB1D4Q6XE38 83 aa6.99□□□□□ -1.29
COL12A1-206ENST00000474564 FAM19A3Q7Z5A8 133 aa6.99□□□□□ -1.29
COL12A1-206ENST00000474564 Q8N3U1 123 aa6.99□□□□□ -1.29
COL12A1-206ENST00000474564 TMEM223A0PJW6 202 aa6.98□□□□□ -1.29
COL12A1-206ENST00000474564 GAGE12HA6NDE8 117 aa6.98□□□□□ -1.29
COL12A1-206ENST00000474564 ZNF815PA8K554 130 aa6.98□□□□□ -1.29
COL12A1-206ENST00000474564 LEPROTO15243 131 aa6.98□□□□□ -1.29
COL12A1-206ENST00000474564 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
COL12A1-206ENST00000474564 BATFQ16520 125 aa6.98□□□□□ -1.29
COL12A1-206ENST00000474564 LINC01561Q8N1V8 128 aa6.98□□□□□ -1.29
COL12A1-206ENST00000474564 M0R2N4 97 aa6.97□□□□□ -1.29
COL12A1-206ENST00000474564 PRSS2P07478 247 aa6.97□□□□□ -1.29
COL12A1-206ENST00000474564 COL7A1Q02388 2944 aa6.97□□□□□ -1.29
COL12A1-206ENST00000474564 FAM104AQ969W3 186 aa6.97□□□□□ -1.29
COL12A1-206ENST00000474564 STAB2Q8WWQ8 2551 aa6.97□□□□□ -1.29
COL12A1-206ENST00000474564 A0A087WZ39 114 aa6.96□□□□□ -1.3
COL12A1-206ENST00000474564 IGKV2D-26A0A0A0MRZ7 120 aa6.96□□□□□ -1.3
COL12A1-206ENST00000474564 MYMXA0A1B0GTQ4 84 aa6.96□□□□□ -1.3
COL12A1-206ENST00000474564 LINC00587B1AMM8 73 aa6.96□□□□□ -1.3
COL12A1-206ENST00000474564 J3QQQ9 107 aa6.96□□□□□ -1.3
COL12A1-206ENST00000474564 CTAG1AP78358 180 aa6.96□□□□□ -1.3
COL12A1-206ENST00000474564 C1orf134Q5TEV5 83 aa6.96□□□□□ -1.3
COL12A1-206ENST00000474564 C5orf38Q86SI9 138 aa6.96□□□□□ -1.3
COL12A1-206ENST00000474564 PCP2Q8IVA1 136 aa6.96□□□□□ -1.3
COL12A1-206ENST00000474564 CDKN2A-AS1Q9UH64 79 aa6.96□□□□□ -1.3
COL12A1-206ENST00000474564 HUWE1Q7Z6Z7 4374 aaKnown RBP6.95□□□□□ -1.3
COL12A1-206ENST00000474564 IGLV5-45A0A087WSX0 123 aa6.95□□□□□ -1.3
COL12A1-206ENST00000474564 IGHV3OR16-9A0A0B4J2B5 98 aa6.95□□□□□ -1.3
COL12A1-206ENST00000474564 IGHV1-58A0A0C4DH39 117 aa6.95□□□□□ -1.3
COL12A1-206ENST00000474564 M0R143 59 aa6.95□□□□□ -1.3
COL12A1-206ENST00000474564 EREGO14944 169 aa6.95□□□□□ -1.3
COL12A1-206ENST00000474564 DLEU1O43261 78 aa6.95□□□□□ -1.3
COL12A1-206ENST00000474564 C14orf177Q52M58 125 aa6.95□□□□□ -1.3
COL12A1-206ENST00000474564 SFTA2Q6UW10 78 aa6.95□□□□□ -1.3
COL12A1-206ENST00000474564 BOD1L2Q8IYS8 172 aa6.95□□□□□ -1.3
COL12A1-206ENST00000474564 C6orf223Q8N319 242 aa6.95□□□□□ -1.3
COL12A1-206ENST00000474564 TOMM7Q9P0U1 55 aa6.95□□□□□ -1.3
COL12A1-206ENST00000474564 ZNF561-AS1K7EIQ3 104 aa6.94□□□□□ -1.3
COL12A1-206ENST00000474564 COX6A2Q02221 97 aa6.94□□□□□ -1.3
COL12A1-206ENST00000474564 C6orf226Q5I0X4 101 aa6.94□□□□□ -1.3
COL12A1-206ENST00000474564 TTTY13Q9BZ97 58 aa6.94□□□□□ -1.3
COL12A1-206ENST00000474564 TP73-AS1Q9UF72 201 aa6.94□□□□□ -1.3
COL12A1-206ENST00000474564 LCE6AA0A183 80 aa6.93□□□□□ -1.3
COL12A1-206ENST00000474564 HINT1P49773 126 aaPredicted RBP6.93□□□□□ -1.3
COL12A1-206ENST00000474564 CKS1BP61024 79 aa6.93□□□□□ -1.3
COL12A1-206ENST00000474564 FOXI1Q12951 378 aa6.93□□□□□ -1.3
COL12A1-206ENST00000474564 HIST1H4GQ99525 98 aa6.93□□□□□ -1.3
COL12A1-206ENST00000474564 DNAH9Q9NYC9 4486 aa6.92□□□□□ -1.3
COL12A1-206ENST00000474564 F8WDY8 70 aa6.92□□□□□ -1.3
COL12A1-206ENST00000474564 HSD52Q0P140 79 aa6.92□□□□□ -1.3
COL12A1-206ENST00000474564 SRSF9Q13242 221 aaKnown RBP eCLIP6.92□□□□□ -1.3
COL12A1-206ENST00000474564 Q6ZR54 194 aa6.92□□□□□ -1.3
COL12A1-206ENST00000474564 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
COL12A1-206ENST00000474564 NDUFA12Q9UI09 145 aa6.92□□□□□ -1.3
COL12A1-206ENST00000474564 SMIM1B2RUZ4 78 aa6.91□□□□□ -1.3
COL12A1-206ENST00000474564 TMEM238C9JI98 176 aa6.91□□□□□ -1.3
COL12A1-206ENST00000474564 CXCL5P42830 114 aa6.91□□□□□ -1.3
COL12A1-206ENST00000474564 PTTG1IPP53801 180 aa6.91□□□□□ -1.3
COL12A1-206ENST00000474564 CIRBPQ14011 172 aaKnown RBP6.91□□□□□ -1.3
COL12A1-206ENST00000474564 MEIG1Q5JSS6 88 aa6.91□□□□□ -1.3
COL12A1-206ENST00000474564 MAPKAPK5-AS1Q8N8E1 139 aa6.91□□□□□ -1.3
COL12A1-206ENST00000474564 COX7B2Q8TF08 81 aa6.91□□□□□ -1.3
COL12A1-206ENST00000474564 HIGD1BQ9P298 99 aa6.91□□□□□ -1.3
COL12A1-206ENST00000474564 GCSHP23434 173 aa6.9□□□□□ -1.3
COL12A1-206ENST00000474564 TSPEAR-AS2P59090 65 aa6.9□□□□□ -1.3
COL12A1-206ENST00000474564 Q8IZM0 81 aa6.9□□□□□ -1.3
COL12A1-206ENST00000474564 KRTAP1-5Q9BYS1 174 aa6.9□□□□□ -1.3
COL12A1-206ENST00000474564 A6NDN8 102 aa6.89□□□□□ -1.31
COL12A1-206ENST00000474564 USP17L23D6RBM5 183 aa6.89□□□□□ -1.31
COL12A1-206ENST00000474564 HERV-K104P63124 156 aa6.89□□□□□ -1.31
COL12A1-206ENST00000474564 SPAG11BQ08648 103 aa6.89□□□□□ -1.31
COL12A1-206ENST00000474564 C2orf91Q6ZV80 131 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms