RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 PYY3Q5JQD4 70 aa7.21□□□□□ -1.26
SEMA4D-216ENST00000474258 PET117Q6UWS5 81 aa7.21□□□□□ -1.26
SEMA4D-216ENST00000474258 ERASQ7Z444 233 aa7.21□□□□□ -1.26
SEMA4D-216ENST00000474258 IFI27L1Q96BM0 104 aa7.21□□□□□ -1.26
SEMA4D-216ENST00000474258 MAP1LC3CQ9BXW4 147 aa7.21□□□□□ -1.26
SEMA4D-216ENST00000474258 KRTAP29-1A8MX34 341 aaPredicted RBP7.2□□□□□ -1.26
SEMA4D-216ENST00000474258 NPSP0C0P6 89 aa7.2□□□□□ -1.26
SEMA4D-216ENST00000474258 KRTDAPP60985 99 aa7.2□□□□□ -1.26
SEMA4D-216ENST00000474258 MIAQ16674 131 aa7.2□□□□□ -1.26
SEMA4D-216ENST00000474258 CIRBP-AS1Q8TBR5 109 aa7.2□□□□□ -1.26
SEMA4D-216ENST00000474258 TMEM141Q96I45 108 aa7.2□□□□□ -1.26
SEMA4D-216ENST00000474258 SCGB3A1Q96QR1 104 aa7.2□□□□□ -1.26
SEMA4D-216ENST00000474258 TIMM17AQ99595 171 aa7.2□□□□□ -1.26
SEMA4D-216ENST00000474258 PYGO1Q9Y3Y4 419 aa7.2□□□□□ -1.26
SEMA4D-216ENST00000474258 TRBV25-1A0A075B6N4 114 aa7.19□□□□□ -1.26
SEMA4D-216ENST00000474258 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.19□□□□□ -1.26
SEMA4D-216ENST00000474258 H7C423 109 aa7.19□□□□□ -1.26
SEMA4D-216ENST00000474258 SMIM6P0DI80 62 aa7.19□□□□□ -1.26
SEMA4D-216ENST00000474258 TIMM21Q9BVV7 248 aa7.19□□□□□ -1.26
SEMA4D-216ENST00000474258 USP17L23D6RBM5 183 aa7.18□□□□□ -1.26
SEMA4D-216ENST00000474258 RBX1P62877 108 aa7.18□□□□□ -1.26
SEMA4D-216ENST00000474258 RPL39P62891 51 aaKnown RBP7.18□□□□□ -1.26
SEMA4D-216ENST00000474258 GAGE6Q13070 117 aa7.18□□□□□ -1.26
SEMA4D-216ENST00000474258 LINC01545Q5VT33 79 aa7.18□□□□□ -1.26
SEMA4D-216ENST00000474258 DGAT2L7PQ6IED9 249 aa7.18□□□□□ -1.26
SEMA4D-216ENST00000474258 LINC00518Q8N0U6 118 aa7.18□□□□□ -1.26
SEMA4D-216ENST00000474258 SPANXA1Q9NS26 97 aa7.18□□□□□ -1.26
SEMA4D-216ENST00000474258 PRR34Q9NV39 138 aa7.18□□□□□ -1.26
SEMA4D-216ENST00000474258 CSDC2Q9Y534 153 aaKnown RBP7.18□□□□□ -1.26
SEMA4D-216ENST00000474258 TRAV12-1A0A0B4J245 112 aa7.17□□□□□ -1.26
SEMA4D-216ENST00000474258 SCGB1D1O95968 90 aa7.17□□□□□ -1.26
SEMA4D-216ENST00000474258 PRSS1P07477 247 aa7.17□□□□□ -1.26
SEMA4D-216ENST00000474258 MRPL52Q86TS9 123 aaKnown RBP7.17□□□□□ -1.26
SEMA4D-216ENST00000474258 LINC00269Q8N2A0 174 aa7.17□□□□□ -1.26
SEMA4D-216ENST00000474258 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
SEMA4D-216ENST00000474258 TMEM243Q9BU79 118 aa7.17□□□□□ -1.26
SEMA4D-216ENST00000474258 UBE2D4Q9Y2X8 147 aa7.17□□□□□ -1.26
SEMA4D-216ENST00000474258 C20orf202A1L168 122 aa7.16□□□□□ -1.26
SEMA4D-216ENST00000474258 KRTAP10-4P60372 401 aaPredicted RBP7.16□□□□□ -1.26
SEMA4D-216ENST00000474258 MRPS36P82909 103 aaKnown RBP7.16□□□□□ -1.26
SEMA4D-216ENST00000474258 SMAGPQ0VAQ4 97 aa7.16□□□□□ -1.26
SEMA4D-216ENST00000474258 CLPSL2Q6UWE3 100 aa7.16□□□□□ -1.26
SEMA4D-216ENST00000474258 Q6ZN92 141 aa7.16□□□□□ -1.26
SEMA4D-216ENST00000474258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.15□□□□□ -1.26
SEMA4D-216ENST00000474258 IGKV2-29A2NJV5 120 aaPredicted RBP7.15□□□□□ -1.26
SEMA4D-216ENST00000474258 PAPPA-AS1Q5QFB9 102 aa7.15□□□□□ -1.26
SEMA4D-216ENST00000474258 KRTAP26-1Q6PEX3 210 aa7.15□□□□□ -1.26
SEMA4D-216ENST00000474258 C9orf163Q8N9P6 203 aa7.15□□□□□ -1.26
SEMA4D-216ENST00000474258 AMELXQ99217 191 aa7.15□□□□□ -1.26
SEMA4D-216ENST00000474258 CST9LQ9H4G1 147 aa7.15□□□□□ -1.26
SEMA4D-216ENST00000474258 IGLV4-3A0A075B6K6 122 aa7.14□□□□□ -1.27
SEMA4D-216ENST00000474258 A0A1B0GUV1 79 aa7.14□□□□□ -1.27
SEMA4D-216ENST00000474258 OXTP01178 125 aa7.14□□□□□ -1.27
SEMA4D-216ENST00000474258 FGF6P10767 208 aa7.14□□□□□ -1.27
SEMA4D-216ENST00000474258 REG3AQ06141 175 aa7.14□□□□□ -1.27
SEMA4D-216ENST00000474258 ODF1Q14990 250 aa7.14□□□□□ -1.27
SEMA4D-216ENST00000474258 PMVKQ15126 192 aa7.14□□□□□ -1.27
SEMA4D-216ENST00000474258 TEX43Q6ZNM6 134 aa7.14□□□□□ -1.27
SEMA4D-216ENST00000474258 TRAV8-4A0A0B4J246 113 aa7.13□□□□□ -1.27
SEMA4D-216ENST00000474258 ZNF25P17030 456 aaPredicted RBP7.13□□□□□ -1.27
SEMA4D-216ENST00000474258 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
SEMA4D-216ENST00000474258 C12orf57Q99622 126 aa7.13□□□□□ -1.27
SEMA4D-216ENST00000474258 OPRPNQ99935 248 aaPredicted RBP7.13□□□□□ -1.27
SEMA4D-216ENST00000474258 VCX2Q9H322 139 aa7.13□□□□□ -1.27
SEMA4D-216ENST00000474258 CDC42SE2Q9NRR3 84 aa7.13□□□□□ -1.27
SEMA4D-216ENST00000474258 IGLV10-54A0A075B6I4 117 aa7.12□□□□□ -1.27
SEMA4D-216ENST00000474258 F8VRH5 84 aa7.12□□□□□ -1.27
SEMA4D-216ENST00000474258 UBE2L6O14933 153 aa7.12□□□□□ -1.27
SEMA4D-216ENST00000474258 SERTAD4-AS1Q5TG53 156 aa7.12□□□□□ -1.27
SEMA4D-216ENST00000474258 IGLV4-60A0A075B6I1 120 aa7.11□□□□□ -1.27
SEMA4D-216ENST00000474258 H0Y8G0 127 aa7.11□□□□□ -1.27
SEMA4D-216ENST00000474258 SDIM1Q6ZPB5 146 aa7.11□□□□□ -1.27
SEMA4D-216ENST00000474258 ZNF664Q8N3J9 261 aa7.11□□□□□ -1.27
SEMA4D-216ENST00000474258 OR5A1Q8NGJ0 315 aa7.11□□□□□ -1.27
SEMA4D-216ENST00000474258 MRPL35Q9NZE8 188 aaKnown RBP7.11□□□□□ -1.27
SEMA4D-216ENST00000474258 CHTOPQ9Y3Y2 248 aaKnown RBP7.11□□□□□ -1.27
SEMA4D-216ENST00000474258 hDV102S1A0JD36 115 aa7.1□□□□□ -1.27
SEMA4D-216ENST00000474258 DPM2O94777 84 aa7.1□□□□□ -1.27
SEMA4D-216ENST00000474258 PLNP26678 52 aa7.1□□□□□ -1.27
SEMA4D-216ENST00000474258 CNBPP62633 177 aaKnown RBP7.1□□□□□ -1.27
SEMA4D-216ENST00000474258 ZC2HC1BQ5TFG8 222 aa7.1□□□□□ -1.27
SEMA4D-216ENST00000474258 AMMECR1LQ6DCA0 310 aa7.1□□□□□ -1.27
SEMA4D-216ENST00000474258 TMEM101Q96IK0 257 aa7.1□□□□□ -1.27
SEMA4D-216ENST00000474258 PMCHL2Q9BQD1 86 aa7.1□□□□□ -1.27
SEMA4D-216ENST00000474258 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.1□□□□□ -1.27
SEMA4D-216ENST00000474258 IGLV4-69A0A075B6H9 119 aa7.09□□□□□ -1.27
SEMA4D-216ENST00000474258 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.09□□□□□ -1.27
SEMA4D-216ENST00000474258 IGKCP01834 107 aa7.09□□□□□ -1.27
SEMA4D-216ENST00000474258 IGLC3P0DOY3 106 aa7.09□□□□□ -1.27
SEMA4D-216ENST00000474258 S100A12P80511 92 aa7.09□□□□□ -1.27
SEMA4D-216ENST00000474258 Q6ZUT4 128 aa7.09□□□□□ -1.27
SEMA4D-216ENST00000474258 FAM19A3Q7Z5A8 133 aa7.09□□□□□ -1.27
SEMA4D-216ENST00000474258 LRP1Q07954 4544 aaKnown RBP7.08□□□□□ -1.28
SEMA4D-216ENST00000474258 IGHV3-64A0A075B6Q5 118 aa7.08□□□□□ -1.28
SEMA4D-216ENST00000474258 PANO1I0J062 215 aa7.08□□□□□ -1.28
SEMA4D-216ENST00000474258 UBE2D1P51668 147 aa7.08□□□□□ -1.28
SEMA4D-216ENST00000474258 ATOH7Q8N100 152 aa7.08□□□□□ -1.28
SEMA4D-216ENST00000474258 DPH3Q96FX2 82 aa7.08□□□□□ -1.28
SEMA4D-216ENST00000474258 C2orf88Q9BSF0 95 aa7.08□□□□□ -1.28
SEMA4D-216ENST00000474258 CIRBPQ14011 172 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms