RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 ESPL1Q14674 2120 aa2.25□□□□□ -2.05
BRCA1-212ENST00000473961 S100A7L2Q5SY68 101 aa2.25□□□□□ -2.05
BRCA1-212ENST00000473961 MRPL36Q9P0J6 103 aaKnown RBP2.25□□□□□ -2.05
BRCA1-212ENST00000473961 DIDO1Q9BTC0 2240 aaKnown RBP2.25□□□□□ -2.05
BRCA1-212ENST00000473961 PRR14LQ5THK1 2151 aa2.25□□□□□ -2.05
BRCA1-212ENST00000473961 LTBP2Q14767 1821 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 TRBV10-3A0A0K0K1G6 114 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 A0A1B0GW54 56 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 IGIPA6NJ69 53 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 COX7A2LO14548 114 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 TIMM17BO60830 172 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 IGKV1-16P04430 117 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 IGKV4-1P06312 121 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 XCL1P47992 114 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 TSPEAR-AS2P59090 65 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 ATP5EP2Q5VTU8 51 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 ZNF833PQ6ZTB9 187 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 SCXQ7RTU7 201 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 DYNAPQ8N1N2 210 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 BRK1Q8WUW1 75 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 CLEC2BQ92478 149 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 UBE2D4Q9Y2X8 147 aa2.24□□□□□ -2.05
BRCA1-212ENST00000473961 RTTNQ86VV8 2226 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 ZNF407Q9C0G0 2248 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 SEC16AO15027 2179 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 TRAV7A0A075B6U4 112 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 TRAV26-2A0A0B4J265 109 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 FAM223BA6NKX1 122 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 C10orf142B7Z368 130 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 E7EUB6 86 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 UBE2L6O14933 153 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 IGHV1-69P01742 117 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 CCL3P10147 92 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 RPL27AP46776 148 aaKnown RBP2.23□□□□□ -2.05
BRCA1-212ENST00000473961 ZNF80P51504 273 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-212ENST00000473961 KLKP1Q107X0 134 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 MIAQ16674 131 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 SPANXN1Q5VSR9 72 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 ZNF826PQ6ZT77 177 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 FP248Q71RG6 208 aaPredicted RBP2.23□□□□□ -2.05
BRCA1-212ENST00000473961 PRR15Q8IV56 129 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 WFDC11Q8NEX6 87 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 MUC7Q8TAX7 377 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 RP1P56715 2156 aa2.23□□□□□ -2.05
BRCA1-212ENST00000473961 MYO7AQ13402 2215 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 CACNA1DQ01668 2161 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 IGKV2-40A0A087WW87 121 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-212ENST00000473961 IGHV3-73A0A0B4J1V6 119 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 TRBV7-6A0A0J9YX20 115 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 H7BZZ5 65 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 I3L2K1 104 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 M0R1W7 72 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 DNAL4O96015 105 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 IGKV2D-40P01614 121 aaPredicted RBP2.22□□□□□ -2.05
BRCA1-212ENST00000473961 CCKP06307 115 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 CIRBPQ14011 172 aaKnown RBP2.22□□□□□ -2.05
BRCA1-212ENST00000473961 HCP5Q6MZN7 132 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 FAM223AQ8IWN6 122 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 LEAP2Q969E1 77 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 OBSCN-AS1Q96MR7 158 aa2.22□□□□□ -2.05
BRCA1-212ENST00000473961 IGKV3D-7A0A0C4DH55 119 aa2.21□□□□□ -2.06
BRCA1-212ENST00000473961 LY6HO94772 140 aa2.21□□□□□ -2.06
BRCA1-212ENST00000473961 TFF1P04155 84 aa2.21□□□□□ -2.06
BRCA1-212ENST00000473961 CTSGP08311 255 aa2.21□□□□□ -2.06
BRCA1-212ENST00000473961 POLR2KP53803 58 aaKnown RBP2.21□□□□□ -2.06
BRCA1-212ENST00000473961 RBM3P98179 157 aaKnown RBP2.21□□□□□ -2.06
BRCA1-212ENST00000473961 LYPD5Q6UWN5 251 aa2.21□□□□□ -2.06
BRCA1-212ENST00000473961 GPHB5Q86YW7 130 aa2.21□□□□□ -2.06
BRCA1-212ENST00000473961 C20orf197Q8N268 126 aa2.21□□□□□ -2.06
BRCA1-212ENST00000473961 C22orf24Q9Y442 160 aa2.21□□□□□ -2.06
BRCA1-212ENST00000473961 LENEPQ9Y5L5 61 aa2.21□□□□□ -2.06
BRCA1-212ENST00000473961 KNTC1P50748 2209 aa2.21□□□□□ -2.06
BRCA1-212ENST00000473961 INTS1Q8N201 2190 aaKnown RBP2.2□□□□□ -2.06
BRCA1-212ENST00000473961 TRAV13-2A0A0B4J235 113 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 IGHV1-18A0A0C4DH31 117 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 IGHV1-58A0A0C4DH39 117 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 TRBV6-5A0A0K0K1A5 114 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 TRBV27A0A0K0K1C4 114 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 A0A1W2PNN7 141 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 IBA57-AS1B1ANH7 110 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 E7EQL1 145 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 H0YGX0 51 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 BLCAPP62952 87 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 DEFB103AP81534 67 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 C10orf55Q5SWW7 151 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 Q8TAT8 98 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 RNASE6Q93091 150 aaKnown RBP2.2□□□□□ -2.06
BRCA1-212ENST00000473961 CCL13Q99616 98 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 LINC00846Q9NV44 126 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 NDUFA12Q9UI09 145 aa2.2□□□□□ -2.06
BRCA1-212ENST00000473961 A0A087WVE0 104 aa2.19□□□□□ -2.06
BRCA1-212ENST00000473961 TRAV12-3A0A0B4J271 114 aa2.19□□□□□ -2.06
BRCA1-212ENST00000473961 H3BPC8 53 aa2.19□□□□□ -2.06
BRCA1-212ENST00000473961 K7EIM0 57 aa2.19□□□□□ -2.06
BRCA1-212ENST00000473961 NDUFB3O43676 98 aa2.19□□□□□ -2.06
BRCA1-212ENST00000473961 ERC2-IT1O76042 136 aa2.19□□□□□ -2.06
BRCA1-212ENST00000473961 MGPP08493 103 aa2.19□□□□□ -2.06
BRCA1-212ENST00000473961 S100A4P26447 101 aaKnown RBP2.19□□□□□ -2.06
BRCA1-212ENST00000473961 RNASE4P34096 147 aaKnown RBP2.19□□□□□ -2.06
BRCA1-212ENST00000473961 RPL28P46779 137 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms