RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 LINC00242Q5T6M2 205 aa11.36□□□□□ -0.59
RPUSD3-214ENST00000473522 TEX43Q6ZNM6 134 aa11.36□□□□□ -0.59
RPUSD3-214ENST00000473522 C5orf38Q86SI9 138 aa11.36□□□□□ -0.59
RPUSD3-214ENST00000473522 VCX2Q9H322 139 aa11.36□□□□□ -0.59
RPUSD3-214ENST00000473522 IGHV3-64A0A075B6Q5 118 aa11.35□□□□□ -0.59
RPUSD3-214ENST00000473522 SMR3BP02814 79 aaPredicted RBP11.35□□□□□ -0.59
RPUSD3-214ENST00000473522 MALP21145 153 aa11.35□□□□□ -0.59
RPUSD3-214ENST00000473522 LINC00173Q6ZV60 143 aa11.35□□□□□ -0.59
RPUSD3-214ENST00000473522 ERASQ7Z444 233 aa11.35□□□□□ -0.59
RPUSD3-214ENST00000473522 CIRBP-AS1Q8TBR5 109 aa11.35□□□□□ -0.59
RPUSD3-214ENST00000473522 ZNF561-AS1K7EIQ3 104 aa11.34□□□□□ -0.59
RPUSD3-214ENST00000473522 UBE2D1P51668 147 aa11.34□□□□□ -0.59
RPUSD3-214ENST00000473522 PAPPA-AS1Q5QFB9 102 aa11.34□□□□□ -0.59
RPUSD3-214ENST00000473522 Q6ZN92 141 aa11.34□□□□□ -0.59
RPUSD3-214ENST00000473522 SCXQ7RTU7 201 aa11.34□□□□□ -0.59
RPUSD3-214ENST00000473522 FAM19A3Q7Z5A8 133 aa11.34□□□□□ -0.59
RPUSD3-214ENST00000473522 C18orf32Q8TCD1 76 aa11.34□□□□□ -0.59
RPUSD3-214ENST00000473522 EPM2AB3EWF7 344 aa11.33□□□□□ -0.6
RPUSD3-214ENST00000473522 APOMO95445 188 aa11.33□□□□□ -0.6
RPUSD3-214ENST00000473522 LINC00614P0C842 121 aa11.33□□□□□ -0.6
RPUSD3-214ENST00000473522 COX6A2Q02221 97 aa11.33□□□□□ -0.6
RPUSD3-214ENST00000473522 CIRBPQ14011 172 aaKnown RBP11.33□□□□□ -0.6
RPUSD3-214ENST00000473522 FA2HQ7L5A8 372 aa11.33□□□□□ -0.6
RPUSD3-214ENST00000473522 CBLN2Q8IUK8 224 aa11.33□□□□□ -0.6
RPUSD3-214ENST00000473522 URB1-AS1Q96HZ7 61 aa11.33□□□□□ -0.6
RPUSD3-214ENST00000473522 ZC2HC1BQ5TFG8 222 aa11.32□□□□□ -0.6
RPUSD3-214ENST00000473522 LINC00526Q96FQ7 95 aa11.32□□□□□ -0.6
RPUSD3-214ENST00000473522 SCGB3A1Q96QR1 104 aa11.32□□□□□ -0.6
RPUSD3-214ENST00000473522 C2orf88Q9BSF0 95 aa11.32□□□□□ -0.6
RPUSD3-214ENST00000473522 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.32□□□□□ -0.6
RPUSD3-214ENST00000473522 IGLV4-69A0A075B6H9 119 aa11.31□□□□□ -0.6
RPUSD3-214ENST00000473522 A0A087WZ39 114 aa11.31□□□□□ -0.6
RPUSD3-214ENST00000473522 PANO1I0J062 215 aa11.31□□□□□ -0.6
RPUSD3-214ENST00000473522 LINC01561Q8N1V8 128 aa11.31□□□□□ -0.6
RPUSD3-214ENST00000473522 OR10D4PQ8NGN7 298 aa11.31□□□□□ -0.6
RPUSD3-214ENST00000473522 C2orf48Q96LS8 159 aa11.31□□□□□ -0.6
RPUSD3-214ENST00000473522 FAM229AH3BQW9 127 aa11.3□□□□□ -0.6
RPUSD3-214ENST00000473522 SYCNQ0VAF6 134 aa11.3□□□□□ -0.6
RPUSD3-214ENST00000473522 F8WDY8 70 aa11.29□□□□□ -0.6
RPUSD3-214ENST00000473522 Q5VSD8 79 aa11.29□□□□□ -0.6
RPUSD3-214ENST00000473522 RAB5BP61020 215 aa11.28□□□□□ -0.6
RPUSD3-214ENST00000473522 A0A096LNJ9 63 aa11.27□□□□□ -0.61
RPUSD3-214ENST00000473522 SEC11AP67812 179 aa11.27□□□□□ -0.61
RPUSD3-214ENST00000473522 CARD19Q96LW7 228 aa11.27□□□□□ -0.61
RPUSD3-214ENST00000473522 SPAG11BQ08648 103 aa11.26□□□□□ -0.61
RPUSD3-214ENST00000473522 KIAA0087Q14695 138 aa11.26□□□□□ -0.61
RPUSD3-214ENST00000473522 Q6ZRU5 148 aa11.26□□□□□ -0.61
RPUSD3-214ENST00000473522 SPACA4Q8TDM5 124 aa11.26□□□□□ -0.61
RPUSD3-214ENST00000473522 CST9LQ9H4G1 147 aa11.26□□□□□ -0.61
RPUSD3-214ENST00000473522 COLCA2A8K830 154 aa11.25□□□□□ -0.61
RPUSD3-214ENST00000473522 RNF151Q2KHN1 245 aa11.25□□□□□ -0.61
RPUSD3-214ENST00000473522 ORAOV1Q8WV07 137 aa11.25□□□□□ -0.61
RPUSD3-214ENST00000473522 CAMK2N2Q96S95 79 aa11.25□□□□□ -0.61
RPUSD3-214ENST00000473522 PKIGQ9Y2B9 76 aa11.25□□□□□ -0.61
RPUSD3-214ENST00000473522 SRRM2Q9UQ35 2752 aaKnown RBP11.25□□□□□ -0.61
RPUSD3-214ENST00000473522 CHTF8P0CG12 524 aa11.24□□□□□ -0.61
RPUSD3-214ENST00000473522 HERVK_113P63121 156 aa11.24□□□□□ -0.61
RPUSD3-214ENST00000473522 LINC00528Q8N1L1 170 aa11.24□□□□□ -0.61
RPUSD3-214ENST00000473522 VPS13BQ7Z7G8 4022 aa11.24□□□□□ -0.61
RPUSD3-214ENST00000473522 A0A087WYN8 130 aa11.23□□□□□ -0.61
RPUSD3-214ENST00000473522 A0A0J9YXV3 536 aa11.23□□□□□ -0.61
RPUSD3-214ENST00000473522 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.23□□□□□ -0.61
RPUSD3-214ENST00000473522 HBDP02042 147 aa11.23□□□□□ -0.61
RPUSD3-214ENST00000473522 PMVKQ15126 192 aa11.23□□□□□ -0.61
RPUSD3-214ENST00000473522 PDZD11Q5EBL8 140 aa11.23□□□□□ -0.61
RPUSD3-214ENST00000473522 MRPL35Q9NZE8 188 aaKnown RBP11.23□□□□□ -0.61
RPUSD3-214ENST00000473522 PLAC8Q9NZF1 115 aa11.23□□□□□ -0.61
RPUSD3-214ENST00000473522 LINC00474Q9P2X8 69 aa11.23□□□□□ -0.61
RPUSD3-214ENST00000473522 TINCRA0A1B0GVN0 87 aa11.22□□□□□ -0.61
RPUSD3-214ENST00000473522 TRGC2P03986 189 aa11.22□□□□□ -0.61
RPUSD3-214ENST00000473522 CHCHD1Q96BP2 118 aaKnown RBP11.22□□□□□ -0.61
RPUSD3-214ENST00000473522 DPH3Q96FX2 82 aa11.22□□□□□ -0.61
RPUSD3-214ENST00000473522 A0A096LNI7 61 aa11.21□□□□□ -0.61
RPUSD3-214ENST00000473522 GEMIN7Q9H840 131 aaKnown RBP11.21□□□□□ -0.61
RPUSD3-214ENST00000473522 CDKN2A-AS1Q9UH64 79 aa11.21□□□□□ -0.61
RPUSD3-214ENST00000473522 IGLV5-45A0A087WSX0 123 aa11.2□□□□□ -0.62
RPUSD3-214ENST00000473522 LOC107984640A0A0U1RRK4 108 aa11.2□□□□□ -0.62
RPUSD3-214ENST00000473522 NDUFA1O15239 70 aa11.2□□□□□ -0.62
RPUSD3-214ENST00000473522 PLA2G1BP04054 148 aaKnown RBP11.2□□□□□ -0.62
RPUSD3-214ENST00000473522 KRTAP10-4P60372 401 aaPredicted RBP11.19□□□□□ -0.62
RPUSD3-214ENST00000473522 PMCHL1Q16048 86 aa11.19□□□□□ -0.62
RPUSD3-214ENST00000473522 MAJINQ3KP22 176 aa11.19□□□□□ -0.62
RPUSD3-214ENST00000473522 C10orf25Q5T742 122 aa11.19□□□□□ -0.62
RPUSD3-214ENST00000473522 UNQ6190/PRO20217Q6UXQ8 127 aa11.19□□□□□ -0.62
RPUSD3-214ENST00000473522 IGKV2-24A0A0C4DH68 120 aa11.18□□□□□ -0.62
RPUSD3-214ENST00000473522 ATP5LO75964 103 aa11.18□□□□□ -0.62
RPUSD3-214ENST00000473522 INAFM2P0DMQ5 153 aa11.18□□□□□ -0.62
RPUSD3-214ENST00000473522 PTTG1IPP53801 180 aa11.18□□□□□ -0.62
RPUSD3-214ENST00000473522 TLX1NBP0CAT3 122 aa11.17□□□□□ -0.62
RPUSD3-214ENST00000473522 Q8IZM0 81 aa11.16□□□□□ -0.62
RPUSD3-214ENST00000473522 STPG4Q8N801 248 aa11.16□□□□□ -0.62
RPUSD3-214ENST00000473522 C6orf48Q9UBA6 75 aa11.16□□□□□ -0.62
RPUSD3-214ENST00000473522 IGLC3P0DOY3 106 aa11.15□□□□□ -0.62
RPUSD3-214ENST00000473522 C6orf226Q5I0X4 101 aa11.15□□□□□ -0.62
RPUSD3-214ENST00000473522 BAGE3Q86Y29 109 aa11.15□□□□□ -0.62
RPUSD3-214ENST00000473522 LINC00469Q8N7U9 141 aa11.15□□□□□ -0.62
RPUSD3-214ENST00000473522 TRBV30A0A0K0K1B3 111 aa11.14□□□□□ -0.63
RPUSD3-214ENST00000473522 GAGE2BQ13066 116 aa11.14□□□□□ -0.63
RPUSD3-214ENST00000473522 C2orf82Q6UX34 121 aa11.14□□□□□ -0.63
RPUSD3-214ENST00000473522 PACRGQ96M98 296 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms