RNA–Protein interactions for RNA: ENST00000473003.5

RAPGEF4-208, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 4

Gene RAPGEF4, Length 593 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-208	ENST00000473003	PMCH	P20382	165 aa		4.19	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	FOXA3	P55318	350 aa	Predicted RBP	4.19	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	CNPY1	Q3B7I2	92 aa		4.19	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	LCE5A	Q5TCM9	118 aa		4.19	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	KRTAP5-3	Q6L8H2	238 aa		4.19	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	C2orf82	Q6UX34	121 aa		4.19	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	KRTAP2-4	Q9BYR9	128 aa		4.19	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	TMEM242	Q9NWH2	141 aa		4.19	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	C7orf77	A4D0Y5	90 aa		4.18	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	ZNF727	A8MUV8	499 aa		4.18	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	UPK1B	O75841	260 aa		4.18	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	AKR1C3	P42330	323 aa		4.18	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	PNRC1	Q12796	327 aa	Predicted RBP	4.18	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	CSDC2	Q9Y534	153 aa	Known RBP	4.18	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	GAGE10	A6NGK3	116 aa		4.17	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	DEFA1	P59665	94 aa		4.17	□□□□□ -1.74
RAPGEF4-208	ENST00000473003		Q6Q795	121 aa		4.17	□□□□□ -1.74
RAPGEF4-208	ENST00000473003		Q6ZUT4	128 aa		4.17	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	FAM210A	Q96ND0	272 aa		4.17	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	TCEAL7	Q9BRU2	100 aa		4.17	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	ACTR3C	Q9C0K3	210 aa	Predicted RBP	4.17	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	RNASE7	Q9H1E1	156 aa	Known RBP	4.17	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	MDN1	Q9NU22	5596 aa		4.17	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	C9orf92	A6NGG3	77 aa		4.16	□□□□□ -1.74
RAPGEF4-208	ENST00000473003		F2Z2F3	143 aa		4.16	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	SPRR4	Q96PI1	79 aa		4.16	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	CCDC32	Q9BV29	185 aa		4.16	□□□□□ -1.74
RAPGEF4-208	ENST00000473003	TRBV6-5	A0A0K0K1A5	114 aa		4.15	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	INMT-MINDY4	F8WBC2	141 aa		4.15	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	MB	P02144	154 aa		4.15	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	KRTAP10-10	P60014	251 aa		4.15	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	RPL32	P62910	135 aa	Known RBP	4.15	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	SMAGP	Q0VAQ4	97 aa		4.15	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	TRIQK	Q629K1	86 aa		4.15	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	FAM19A1	Q7Z5A9	133 aa		4.15	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	STOML3	Q8TAV4	291 aa		4.15	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	GNB1L	Q9BYB4	327 aa		4.15	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	RAB19	A4D1S5	217 aa		4.14	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	CCDC160	A6NGH7	325 aa		4.14	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	CENPX	A8MT69	81 aa		4.14	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	ATP6V0C	P27449	155 aa		4.14	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	RPS20	P60866	119 aa	Known RBP	4.14	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	TEX261	Q6UWH6	196 aa		4.14	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	BAGE2	Q86Y30	109 aa		4.14	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	PSMG3	Q9BT73	122 aa	Predicted RBP	4.14	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	IGLV5-37	A0A075B6J1	123 aa		4.13	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	SIX6	O95475	246 aa		4.13	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	S100A9	P06702	114 aa	Known RBP	4.13	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	FHIT	P49789	147 aa		4.13	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	ZNF726P1	Q15940	193 aa		4.13	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	CBLN2	Q8IUK8	224 aa		4.13	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	NUDT15	Q9NV35	164 aa		4.13	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	IGKV2-28	A0A075B6P5	120 aa		4.12	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	IGKV2D-28	P01615	120 aa		4.12	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	RPL37	P61927	97 aa	Known RBP	4.12	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	SERF2	P84101	59 aa		4.12	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	HIGD2A	Q9BW72	106 aa		4.12	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	TMEM126A	Q9H061	195 aa		4.12	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	TNFSF18	Q9UNG2	199 aa		4.12	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.12	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.11	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	TRBV27	A0A0K0K1C4	114 aa		4.11	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	CTXND1	A0A1B0GTU2	59 aa		4.11	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	IFNA1	P01562	189 aa		4.11	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	TWIST1	Q15672	202 aa		4.11	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	CST9LP1	Q5W188	147 aa		4.11	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	PPP1R1C	Q8WVI7	109 aa		4.11	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	TIMM21	Q9BVV7	248 aa		4.11	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	CNFN	Q9BYD5	112 aa		4.11	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	GEMIN7	Q9H840	131 aa	Known RBP	4.11	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	ST20	Q9HBF5	79 aa		4.11	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	XKRY2	A2RUG3	117 aa		4.1	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	TMEM238	C9JI98	176 aa		4.1	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	PET100	P0DJ07	73 aa		4.1	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	LGALS3	P17931	250 aa	Known RBP	4.1	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	POLR2K	P53803	58 aa	Known RBP	4.1	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	C9orf62	Q8N4C0	152 aa		4.1	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	NKAPP1	Q8N9T2	125 aa		4.1	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	IFITM10	A6NMD0	228 aa		4.09	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	MPC2	O95563	127 aa		4.09	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	ATP6V1G2	O95670	118 aa		4.09	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	FCER1G	P30273	86 aa		4.09	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	MOBP	Q13875	183 aa		4.09	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	KRTAP19-4	Q3LI73	84 aa		4.09	□□□□□ -1.75
RAPGEF4-208	ENST00000473003	FAM104A	Q969W3	186 aa		4.09	□□□□□ -1.75
RAPGEF4-208	ENST00000473003		M0R378	163 aa		4.08	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	SCO1	O75880	301 aa		4.08	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	IGLV6-57	P01721	117 aa		4.08	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	S100A5	P33763	92 aa		4.08	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	CKS1B	P61024	79 aa		4.08	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	SMIM15	Q7Z3B0	74 aa		4.08	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	PRSS2	P07478	247 aa		4.07	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	KRTAP5-9	P26371	169 aa		4.07	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	HBB	P68871	147 aa		4.07	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	LINC01551	Q86U37	167 aa		4.07	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	MAP1LC3B2	A6NCE7	125 aa		4.06	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	PLA2G10	O15496	165 aa		4.06	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	LYRM1	O43325	122 aa		4.06	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	IL7	P13232	177 aa		4.06	□□□□□ -1.76
RAPGEF4-208	ENST00000473003	H2BFS	P57053	126 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms